RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
HTT-202ENST00000502820 A0A1B0GUV1 79 aa3.41□□□□□ -1.86
HTT-202ENST00000502820 BPY2O14599 106 aa3.41□□□□□ -1.86
HTT-202ENST00000502820 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
HTT-202ENST00000502820 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
HTT-202ENST00000502820 LOC100131303A0A0U1RQF7 123 aa3.4□□□□□ -1.87
HTT-202ENST00000502820 A0A0U1RRA0 63 aa3.4□□□□□ -1.87
HTT-202ENST00000502820 COX7BP24311 80 aa3.4□□□□□ -1.87
HTT-202ENST00000502820 C9orf129Q5T035 196 aaKnown RBP3.4□□□□□ -1.87
HTT-202ENST00000502820 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
HTT-202ENST00000502820 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.39□□□□□ -1.87
HTT-202ENST00000502820 TRBV6-8A0A0A6YYG3 113 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 IGHV3-73A0A0B4J1V6 119 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 VPREB1P12018 145 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 RMI2Q96E14 147 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 TOMM7Q9P0U1 55 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 PRO0255Q9UI72 69 aa3.39□□□□□ -1.87
HTT-202ENST00000502820 LRP2P98164 4655 aa3.38□□□□□ -1.87
HTT-202ENST00000502820 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
HTT-202ENST00000502820 RPL37AP61513 92 aaKnown RBP3.38□□□□□ -1.87
HTT-202ENST00000502820 UBE2BP63146 152 aa3.38□□□□□ -1.87
HTT-202ENST00000502820 SCXQ7RTU7 201 aa3.38□□□□□ -1.87
HTT-202ENST00000502820 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
HTT-202ENST00000502820 GVQW2A0A096LPI5 108 aaPredicted RBP3.37□□□□□ -1.87
HTT-202ENST00000502820 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 hDV103S1A0JD37 113 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 H3BPC8 53 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 IGLV6-57P01721 117 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 C6orf99Q4VX62 202 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
HTT-202ENST00000502820 NDUFS5O43920 106 aa3.36□□□□□ -1.87
HTT-202ENST00000502820 SLPIP03973 132 aa3.36□□□□□ -1.87
HTT-202ENST00000502820 CD164L2Q6UWJ8 174 aa3.36□□□□□ -1.87
HTT-202ENST00000502820 MRPL55Q7Z7F7 128 aaKnown RBP3.36□□□□□ -1.87
HTT-202ENST00000502820 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 GYPEP15421 78 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 UBE2AP49459 152 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 LELP1Q5T871 98 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 LIMD2Q9BT23 127 aa3.35□□□□□ -1.87
HTT-202ENST00000502820 IGKV4-1P06312 121 aa3.34□□□□□ -1.87
HTT-202ENST00000502820 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
HTT-202ENST00000502820 Q6ZQY7 126 aa3.34□□□□□ -1.87
HTT-202ENST00000502820 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
HTT-202ENST00000502820 LINC00474Q9P2X8 69 aa3.34□□□□□ -1.87
HTT-202ENST00000502820 LRCOL1A6NCL2 159 aa3.33□□□□□ -1.88
HTT-202ENST00000502820 LORP23490 312 aaPredicted RBP3.33□□□□□ -1.88
HTT-202ENST00000502820 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
HTT-202ENST00000502820 Q9BRP9 147 aa3.33□□□□□ -1.88
HTT-202ENST00000502820 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
HTT-202ENST00000502820 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 ETDCA0A1B0GVM5 59 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 ZNF73O43830 326 aaPredicted RBP3.32□□□□□ -1.88
HTT-202ENST00000502820 KRTAP10-4P60372 401 aaPredicted RBP3.32□□□□□ -1.88
HTT-202ENST00000502820 KIAA0087Q14695 138 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 LINC01556Q5JQF7 62 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 ATP11AUNQ6ZP68 121 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 MPLKIPQ8TAP9 179 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
HTT-202ENST00000502820 Q9UF83 564 aa3.32□□□□□ -1.88
HTT-202ENST00000502820 IGLV5-48A0A075B6I7 105 aa3.31□□□□□ -1.88
HTT-202ENST00000502820 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
HTT-202ENST00000502820 Q6ZSA8 131 aa3.31□□□□□ -1.88
HTT-202ENST00000502820 HCG22E2RYF7 251 aa3.3□□□□□ -1.88
HTT-202ENST00000502820 M0R378 163 aa3.3□□□□□ -1.88
HTT-202ENST00000502820 MP68P56378 58 aa3.3□□□□□ -1.88
HTT-202ENST00000502820 Q6ZRP5 223 aa3.3□□□□□ -1.88
HTT-202ENST00000502820 PHF5AQ7RTV0 110 aaKnown RBP3.3□□□□□ -1.88
HTT-202ENST00000502820 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
HTT-202ENST00000502820 A0A087X002 238 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
HTT-202ENST00000502820 KCNQ1DNQ9H478 68 aa3.29□□□□□ -1.88
HTT-202ENST00000502820 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
HTT-202ENST00000502820 ASB16-AS1Q495Z4 193 aa3.28□□□□□ -1.88
HTT-202ENST00000502820 Q75L30 129 aa3.28□□□□□ -1.88
HTT-202ENST00000502820 SPRR4Q96PI1 79 aa3.28□□□□□ -1.88
HTT-202ENST00000502820 HIGD2AQ9BW72 106 aa3.28□□□□□ -1.88
HTT-202ENST00000502820 IGKV3OR2-268A0A0C4DH90 116 aa3.27□□□□□ -1.89
HTT-202ENST00000502820 LOC101927531A0A1B0GV80 90 aa3.27□□□□□ -1.89
HTT-202ENST00000502820 REG3AQ06141 175 aa3.27□□□□□ -1.89
HTT-202ENST00000502820 XP32Q5T750 250 aa3.27□□□□□ -1.89
HTT-202ENST00000502820 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 RPL37AP8A6NKH3 93 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 SYCNQ0VAF6 134 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 SMIM29Q86T20 159 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 Q8NBF4 154 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
HTT-202ENST00000502820 LPAP08519 4548 aa3.25□□□□□ -1.89
HTT-202ENST00000502820 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
HTT-202ENST00000502820 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms