RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 GDF5OSQ5U4N7 250 aa3.29□□□□□ -1.88
RFC1-204ENST00000502706 LINC00526Q96FQ7 95 aa3.29□□□□□ -1.88
RFC1-204ENST00000502706 MRPL36Q9P0J6 103 aaKnown RBP3.29□□□□□ -1.88
RFC1-204ENST00000502706 PYYP10082 97 aa3.28□□□□□ -1.88
RFC1-204ENST00000502706 DEFB1P60022 68 aa3.28□□□□□ -1.88
RFC1-204ENST00000502706 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
RFC1-204ENST00000502706 TMEM254Q8TBM7 123 aa3.28□□□□□ -1.88
RFC1-204ENST00000502706 LINC00167Q96N53 147 aa3.28□□□□□ -1.88
RFC1-204ENST00000502706 TMEM167BQ9NRX6 74 aa3.28□□□□□ -1.88
RFC1-204ENST00000502706 TRBV7-7A0A0K0K1E9 115 aa3.27□□□□□ -1.89
RFC1-204ENST00000502706 DEFB130BP0DP73 79 aa3.27□□□□□ -1.89
RFC1-204ENST00000502706 DEFB130AP0DP74 79 aa3.27□□□□□ -1.89
RFC1-204ENST00000502706 CKS2P33552 79 aa3.27□□□□□ -1.89
RFC1-204ENST00000502706 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
RFC1-204ENST00000502706 IGKV2-24A0A0C4DH68 120 aa3.26□□□□□ -1.89
RFC1-204ENST00000502706 MYMXA0A1B0GTQ4 84 aa3.26□□□□□ -1.89
RFC1-204ENST00000502706 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
RFC1-204ENST00000502706 Q5VSD8 79 aa3.26□□□□□ -1.89
RFC1-204ENST00000502706 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 LOC107984156A0A0G2JMH3 177 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 RBAKDNA6NC62 111 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 HIGD1CA8MV81 97 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 H3BVH4 76 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 COX7CP15954 63 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 UBE2D3P61077 147 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 UBE2D2P62837 147 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 IGFL1Q6UW32 110 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 ARL17AQ8IVW1 177 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 LYPD1Q8N2G4 141 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 IFI27L1Q96BM0 104 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 DPH3Q96FX2 82 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 ODF3Q96PU9 254 aa3.25□□□□□ -1.89
RFC1-204ENST00000502706 TIMM8BQ9Y5J9 83 aaPredicted RBP3.25□□□□□ -1.89
RFC1-204ENST00000502706 TRBV7-3A0A075B6L6 115 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 A8MTW9 85 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 HTN1P15515 57 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 FCER1GP30273 86 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 C9orf163Q8N9P6 203 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 COPS9Q8WXC6 57 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 LINC01600Q96MT4 127 aa3.24□□□□□ -1.89
RFC1-204ENST00000502706 MUC2Q02817 5179 aa3.23□□□□□ -1.89
RFC1-204ENST00000502706 TRAV12-2A0A075B6T6 113 aa3.23□□□□□ -1.89
RFC1-204ENST00000502706 A0A0J9YY99 117 aa3.23□□□□□ -1.89
RFC1-204ENST00000502706 IGKCP01834 107 aa3.23□□□□□ -1.89
RFC1-204ENST00000502706 TRGV9Q99603 122 aa3.23□□□□□ -1.89
RFC1-204ENST00000502706 NOP10Q9NPE3 64 aaKnown RBP3.23□□□□□ -1.89
RFC1-204ENST00000502706 LRP2P98164 4655 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 LINC01549A6NIU2 74 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 ATOX1O00244 68 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 ACYP1P07311 99 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 ZNF56Q15929 161 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 TMEM170BQ5T4T1 132 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 MIC13Q5XKP0 118 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 C2orf82Q6UX34 121 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 Q6ZRN7 208 aaPredicted RBP3.22□□□□□ -1.89
RFC1-204ENST00000502706 TMEM263Q8WUH6 116 aaKnown RBP3.22□□□□□ -1.89
RFC1-204ENST00000502706 MGST2Q99735 147 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 TIMM21Q9BVV7 248 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 AGPAT4-IT1Q9H0P7 198 aa3.22□□□□□ -1.89
RFC1-204ENST00000502706 A0A087WSZ3 146 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 H3BNG1 76 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 ERC2-IT1O76042 136 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.9
RFC1-204ENST00000502706 UBE2D1P51668 147 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 UBE2L3P68036 154 aaKnown RBP3.21□□□□□ -1.9
RFC1-204ENST00000502706 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.21□□□□□ -1.9
RFC1-204ENST00000502706 NXT2Q9NPJ8 142 aaKnown RBP3.21□□□□□ -1.9
RFC1-204ENST00000502706 A0A087WTM6 91 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 A0A096LPF7 62 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 A0A1B0GUT8 65 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 K7EMI3 77 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 IFI27P40305 119 aaPredicted RBP3.2□□□□□ -1.9
RFC1-204ENST00000502706 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
RFC1-204ENST00000502706 LINC00643Q86TS7 51 aa3.2□□□□□ -1.9
RFC1-204ENST00000502706 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 TRGV2A0A075B6R0 118 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 A0A0G2JQZ4 141 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 hADV29S1A0JD25 119 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 H3BRN7 92 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 PLNP26678 52 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 HAMPP81172 84 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 LINC00269Q8N2A0 174 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 FLG2Q5D862 2391 aaPredicted RBP3.19□□□□□ -1.9
RFC1-204ENST00000502706 PKHD1L1Q86WI1 4243 aa3.19□□□□□ -1.9
RFC1-204ENST00000502706 LINC01546A6NGU7 62 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 A6NN06 94 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 PRB4P10163 310 aaPredicted RBP3.18□□□□□ -1.9
RFC1-204ENST00000502706 CASC2Q6XLA1 102 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 DSCR8Q96T75 97 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 PRO1854Q9UHT4 67 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 SERP1Q9Y6X1 66 aa3.18□□□□□ -1.9
RFC1-204ENST00000502706 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms