RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
VCAN-204ENST00000502527 EPM2AB3EWF7 344 aa10.35□□□□□ -0.75
VCAN-204ENST00000502527 UBE2AP49459 152 aa10.35□□□□□ -0.75
VCAN-204ENST00000502527 DSCR10P59022 87 aa10.34□□□□□ -0.75
VCAN-204ENST00000502527 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
VCAN-204ENST00000502527 Q6ZRN7 208 aaPredicted RBP10.33□□□□□ -0.76
VCAN-204ENST00000502527 A0A0G2JQZ4 141 aa10.32□□□□□ -0.76
VCAN-204ENST00000502527 SPRR1BP22528 89 aa10.32□□□□□ -0.76
VCAN-204ENST00000502527 OXTP01178 125 aa10.31□□□□□ -0.76
VCAN-204ENST00000502527 K7EQZ3 153 aa10.29□□□□□ -0.76
VCAN-204ENST00000502527 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
VCAN-204ENST00000502527 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
VCAN-204ENST00000502527 A0A087WSZ3 146 aa10.28□□□□□ -0.76
VCAN-204ENST00000502527 A0A0U1RQV1 116 aa10.28□□□□□ -0.76
VCAN-204ENST00000502527 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
VCAN-204ENST00000502527 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
VCAN-204ENST00000502527 ATP5EP56381 51 aaPredicted RBP10.26□□□□□ -0.77
VCAN-204ENST00000502527 CSMD3Q7Z407 3707 aa10.26□□□□□ -0.77
VCAN-204ENST00000502527 PANO1I0J062 215 aa10.25□□□□□ -0.77
VCAN-204ENST00000502527 DNAH7Q8WXX0 4024 aa10.24□□□□□ -0.77
VCAN-204ENST00000502527 HCG22E2RYF7 251 aa10.24□□□□□ -0.77
VCAN-204ENST00000502527 LCE6AA0A183 80 aa10.22□□□□□ -0.77
VCAN-204ENST00000502527 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
VCAN-204ENST00000502527 DEFB116Q30KQ4 102 aa10.22□□□□□ -0.77
VCAN-204ENST00000502527 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
VCAN-204ENST00000502527 A0A087WTM6 91 aa10.2□□□□□ -0.78
VCAN-204ENST00000502527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
VCAN-204ENST00000502527 VPS13DQ5THJ4 4388 aa10.17□□□□□ -0.78
VCAN-204ENST00000502527 C5orf47Q569G3 176 aa10.16□□□□□ -0.78
VCAN-204ENST00000502527 Q5XG85 94 aa10.15□□□□□ -0.78
VCAN-204ENST00000502527 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
VCAN-204ENST00000502527 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
VCAN-204ENST00000502527 WFDC13Q8IUB5 93 aa10.13□□□□□ -0.79
VCAN-204ENST00000502527 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
VCAN-204ENST00000502527 RTL8CO15255 209 aa10.13□□□□□ -0.79
VCAN-204ENST00000502527 Q6ZR54 194 aa10.11□□□□□ -0.79
VCAN-204ENST00000502527 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
VCAN-204ENST00000502527 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
VCAN-204ENST00000502527 A8MWP4 228 aa10.11□□□□□ -0.79
VCAN-204ENST00000502527 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
VCAN-204ENST00000502527 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
VCAN-204ENST00000502527 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
VCAN-204ENST00000502527 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
VCAN-204ENST00000502527 LINC00483Q53H64 154 aa10.09□□□□□ -0.79
VCAN-204ENST00000502527 ZNF706Q9Y5V0 76 aaPredicted RBP10.08□□□□□ -0.8
VCAN-204ENST00000502527 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
VCAN-204ENST00000502527 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
VCAN-204ENST00000502527 IGLV9-49A0A0B4J1Y8 123 aa10.06□□□□□ -0.8
VCAN-204ENST00000502527 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
VCAN-204ENST00000502527 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
VCAN-204ENST00000502527 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
VCAN-204ENST00000502527 MP68P56378 58 aa10.05□□□□□ -0.8
VCAN-204ENST00000502527 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
VCAN-204ENST00000502527 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
VCAN-204ENST00000502527 NDUFB1O75438 58 aa10.02□□□□□ -0.81
VCAN-204ENST00000502527 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
VCAN-204ENST00000502527 MEGF8Q7Z7M0 2845 aa10.01□□□□□ -0.81
VCAN-204ENST00000502527 ZNF861PO60384 105 aa10.01□□□□□ -0.81
VCAN-204ENST00000502527 HECTD4Q9Y4D8 3996 aa9.99□□□□□ -0.81
VCAN-204ENST00000502527 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
VCAN-204ENST00000502527 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
VCAN-204ENST00000502527 MMP24-AS1A0A0U1RRL7 71 aa9.97□□□□□ -0.81
VCAN-204ENST00000502527 H3BPC8 53 aa9.97□□□□□ -0.81
VCAN-204ENST00000502527 Q96NJ1 140 aa9.97□□□□□ -0.81
VCAN-204ENST00000502527 DNAH2Q9P225 4427 aa9.96□□□□□ -0.81
VCAN-204ENST00000502527 MOBPQ13875 183 aa9.96□□□□□ -0.81
VCAN-204ENST00000502527 LINC00208Q96KT6 92 aa9.96□□□□□ -0.81
VCAN-204ENST00000502527 H0Y9P7 68 aa9.95□□□□□ -0.82
VCAN-204ENST00000502527 TRAV22A0A0B4J277 110 aa9.95□□□□□ -0.82
VCAN-204ENST00000502527 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
VCAN-204ENST00000502527 hDV103S1A0JD37 113 aa9.94□□□□□ -0.82
VCAN-204ENST00000502527 LY6G6CO95867 125 aa9.94□□□□□ -0.82
VCAN-204ENST00000502527 CYP4F30PQ9H0H9 118 aa9.92□□□□□ -0.82
VCAN-204ENST00000502527 ANAPC11Q9NYG5 84 aa9.92□□□□□ -0.82
VCAN-204ENST00000502527 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
VCAN-204ENST00000502527 C1orf64Q8NEQ6 169 aa9.91□□□□□ -0.82
VCAN-204ENST00000502527 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
VCAN-204ENST00000502527 J3QL48 77 aa9.89□□□□□ -0.83
VCAN-204ENST00000502527 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
VCAN-204ENST00000502527 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
VCAN-204ENST00000502527 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
VCAN-204ENST00000502527 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
VCAN-204ENST00000502527 FBN3Q75N90 2809 aa9.87□□□□□ -0.83
VCAN-204ENST00000502527 A0A1B0GVX0 72 aa9.87□□□□□ -0.83
VCAN-204ENST00000502527 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
VCAN-204ENST00000502527 PRR4Q16378 134 aa9.86□□□□□ -0.83
VCAN-204ENST00000502527 MPLKIPQ8TAP9 179 aa9.86□□□□□ -0.83
VCAN-204ENST00000502527 TGP01266 2768 aa9.86□□□□□ -0.83
VCAN-204ENST00000502527 SPANXA2-OT1Q8N9U9 137 aa9.85□□□□□ -0.83
VCAN-204ENST00000502527 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
VCAN-204ENST00000502527 DNHD1Q96M86 4753 aa9.84□□□□□ -0.83
VCAN-204ENST00000502527 CIRBP-AS1Q8TBR5 109 aa9.81□□□□□ -0.84
VCAN-204ENST00000502527 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
VCAN-204ENST00000502527 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
VCAN-204ENST00000502527 CD164Q04900 197 aa9.79□□□□□ -0.84
VCAN-204ENST00000502527 DNAH6Q9C0G6 4158 aa9.78□□□□□ -0.84
VCAN-204ENST00000502527 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
VCAN-204ENST00000502527 SSBP3-AS1Q7Z2R9 100 aa9.78□□□□□ -0.84
VCAN-204ENST00000502527 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
VCAN-204ENST00000502527 NDUFS5O43920 106 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms