RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 IGFL1Q6UW32 110 aa6.18□□□□□ -1.42
CLIP1-204ENST00000501271 PHF5AQ7RTV0 110 aaKnown RBP6.18□□□□□ -1.42
CLIP1-204ENST00000501271 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
CLIP1-204ENST00000501271 DSCR10P59022 87 aa6.17□□□□□ -1.42
CLIP1-204ENST00000501271 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
CLIP1-204ENST00000501271 K7EQZ3 153 aa6.16□□□□□ -1.42
CLIP1-204ENST00000501271 B9D2Q9BPU9 175 aa6.16□□□□□ -1.42
CLIP1-204ENST00000501271 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.42
CLIP1-204ENST00000501271 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
CLIP1-204ENST00000501271 MDFIQ99750 246 aa6.15□□□□□ -1.43
CLIP1-204ENST00000501271 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 NDUFC1O43677 76 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 C9orf163Q8N9P6 203 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 A0A0U1RQV1 116 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 FAM30AQ9NZY2 134 aa6.14□□□□□ -1.43
CLIP1-204ENST00000501271 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
CLIP1-204ENST00000501271 PANO1I0J062 215 aa6.13□□□□□ -1.43
CLIP1-204ENST00000501271 UBE2AP49459 152 aa6.13□□□□□ -1.43
CLIP1-204ENST00000501271 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
CLIP1-204ENST00000501271 SERP1Q9Y6X1 66 aa6.13□□□□□ -1.43
CLIP1-204ENST00000501271 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
CLIP1-204ENST00000501271 Q5XG85 94 aa6.12□□□□□ -1.43
CLIP1-204ENST00000501271 VPS13DQ5THJ4 4388 aa6.12□□□□□ -1.43
CLIP1-204ENST00000501271 A0A087WSZ3 146 aa6.11□□□□□ -1.43
CLIP1-204ENST00000501271 H0Y9J4 135 aa6.11□□□□□ -1.43
CLIP1-204ENST00000501271 PRKDCP78527 4128 aaKnown RBP6.11□□□□□ -1.43
CLIP1-204ENST00000501271 NUPR2A6NF83 97 aa6.1□□□□□ -1.43
CLIP1-204ENST00000501271 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
CLIP1-204ENST00000501271 SPRR1BP22528 89 aa6.09□□□□□ -1.43
CLIP1-204ENST00000501271 LCE6AA0A183 80 aa6.09□□□□□ -1.43
CLIP1-204ENST00000501271 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
CLIP1-204ENST00000501271 HECTD4Q9Y4D8 3996 aa6.09□□□□□ -1.43
CLIP1-204ENST00000501271 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
CLIP1-204ENST00000501271 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-204ENST00000501271 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
CLIP1-204ENST00000501271 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
CLIP1-204ENST00000501271 KRTAP13-1Q8IUC0 172 aa6.07□□□□□ -1.44
CLIP1-204ENST00000501271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-204ENST00000501271 PKIGQ9Y2B9 76 aa6.06□□□□□ -1.44
CLIP1-204ENST00000501271 KMT2AQ03164 3969 aa6.06□□□□□ -1.44
CLIP1-204ENST00000501271 WFDC13Q8IUB5 93 aa6.05□□□□□ -1.44
CLIP1-204ENST00000501271 SPACA4Q8TDM5 124 aa6.05□□□□□ -1.44
CLIP1-204ENST00000501271 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
CLIP1-204ENST00000501271 DNAH2Q9P225 4427 aa6.04□□□□□ -1.44
CLIP1-204ENST00000501271 SEC61GP60059 68 aa6.04□□□□□ -1.44
CLIP1-204ENST00000501271 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
CLIP1-204ENST00000501271 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
CLIP1-204ENST00000501271 FP248Q71RG6 208 aaPredicted RBP6.03□□□□□ -1.44
CLIP1-204ENST00000501271 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
CLIP1-204ENST00000501271 A0A087WTM6 91 aa6.02□□□□□ -1.45
CLIP1-204ENST00000501271 C5orf47Q569G3 176 aa6.02□□□□□ -1.45
CLIP1-204ENST00000501271 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
CLIP1-204ENST00000501271 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
CLIP1-204ENST00000501271 KRTAP29-1A8MX34 341 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-204ENST00000501271 FAM229BQ4G0N7 80 aa6.01□□□□□ -1.45
CLIP1-204ENST00000501271 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
CLIP1-204ENST00000501271 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
CLIP1-204ENST00000501271 FBN3Q75N90 2809 aa6□□□□□ -1.45
CLIP1-204ENST00000501271 PRR15Q8IV56 129 aa6□□□□□ -1.45
CLIP1-204ENST00000501271 MEGF8Q7Z7M0 2845 aa6□□□□□ -1.45
CLIP1-204ENST00000501271 A8MWP4 228 aa5.99□□□□□ -1.45
CLIP1-204ENST00000501271 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
CLIP1-204ENST00000501271 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
CLIP1-204ENST00000501271 RTL8CO15255 209 aa5.98□□□□□ -1.45
CLIP1-204ENST00000501271 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
CLIP1-204ENST00000501271 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
CLIP1-204ENST00000501271 Q6ZR54 194 aa5.97□□□□□ -1.45
CLIP1-204ENST00000501271 DNHD1Q96M86 4753 aa5.96□□□□□ -1.45
CLIP1-204ENST00000501271 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.45
CLIP1-204ENST00000501271 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
CLIP1-204ENST00000501271 H3BS24 57 aa5.95□□□□□ -1.46
CLIP1-204ENST00000501271 Q96NJ1 140 aa5.95□□□□□ -1.46
CLIP1-204ENST00000501271 TGP01266 2768 aa5.95□□□□□ -1.46
CLIP1-204ENST00000501271 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 MP68P56378 58 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 LINC00208Q96KT6 92 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 PLAC8Q9NZF1 115 aa5.94□□□□□ -1.46
CLIP1-204ENST00000501271 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 PRR4Q16378 134 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 ANAPC11Q9NYG5 84 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 H0Y9P7 68 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 MOBPQ13875 183 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 C1orf64Q8NEQ6 169 aa5.93□□□□□ -1.46
CLIP1-204ENST00000501271 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
CLIP1-204ENST00000501271 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-204ENST00000501271 DNAH6Q9C0G6 4158 aa5.92□□□□□ -1.46
CLIP1-204ENST00000501271 ZNF861PO60384 105 aa5.9□□□□□ -1.46
CLIP1-204ENST00000501271 NDUFB1O75438 58 aa5.9□□□□□ -1.46
CLIP1-204ENST00000501271 LINC00336Q6ZUF6 198 aa5.9□□□□□ -1.46
CLIP1-204ENST00000501271 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
CLIP1-204ENST00000501271 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.47
CLIP1-204ENST00000501271 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
CLIP1-204ENST00000501271 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
CLIP1-204ENST00000501271 C1orf134Q5TEV5 83 aa5.89□□□□□ -1.47
CLIP1-204ENST00000501271 H3BPC8 53 aa5.88□□□□□ -1.47
CLIP1-204ENST00000501271 ASB16-AS1Q495Z4 193 aa5.88□□□□□ -1.47
CLIP1-204ENST00000501271 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms