RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 Q75L30 129 aa7.52□□□□□ -1.21
SEC61A1-207ENST00000498837 A6NDN8 102 aa7.5□□□□□ -1.21
SEC61A1-207ENST00000498837 SCGB1D4Q6XE38 83 aa7.5□□□□□ -1.21
SEC61A1-207ENST00000498837 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
SEC61A1-207ENST00000498837 HIST1H2BLQ99880 126 aa7.49□□□□□ -1.21
SEC61A1-207ENST00000498837 A4D1N5 150 aa7.47□□□□□ -1.21
SEC61A1-207ENST00000498837 F8WEM9 126 aa7.47□□□□□ -1.21
SEC61A1-207ENST00000498837 IFITM1P13164 125 aa7.47□□□□□ -1.21
SEC61A1-207ENST00000498837 S100A1P23297 94 aa7.47□□□□□ -1.21
SEC61A1-207ENST00000498837 Q6ZVH6 145 aa7.47□□□□□ -1.21
SEC61A1-207ENST00000498837 TRBV7-7A0A0K0K1E9 115 aa7.46□□□□□ -1.22
SEC61A1-207ENST00000498837 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
SEC61A1-207ENST00000498837 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.22
SEC61A1-207ENST00000498837 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
SEC61A1-207ENST00000498837 MT2AP02795 61 aa7.45□□□□□ -1.22
SEC61A1-207ENST00000498837 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
SEC61A1-207ENST00000498837 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
SEC61A1-207ENST00000498837 SMIM11BQ8TCY0 68 aa7.45□□□□□ -1.22
SEC61A1-207ENST00000498837 LCE2BO14633 110 aa7.44□□□□□ -1.22
SEC61A1-207ENST00000498837 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
SEC61A1-207ENST00000498837 Q96NJ1 140 aa7.44□□□□□ -1.22
SEC61A1-207ENST00000498837 S100A2P29034 98 aa7.43□□□□□ -1.22
SEC61A1-207ENST00000498837 Q6JHZ5 121 aa7.43□□□□□ -1.22
SEC61A1-207ENST00000498837 CLEC2BQ92478 149 aa7.43□□□□□ -1.22
SEC61A1-207ENST00000498837 Q6ZQY7 126 aa7.4□□□□□ -1.22
SEC61A1-207ENST00000498837 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 TRAV13-2A0A0B4J235 113 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 MT1FP04733 61 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 OCIAD2Q56VL3 154 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
SEC61A1-207ENST00000498837 LST1O00453 97 aa7.38□□□□□ -1.23
SEC61A1-207ENST00000498837 S100A6P06703 90 aa7.38□□□□□ -1.23
SEC61A1-207ENST00000498837 A8MUU9 505 aa7.37□□□□□ -1.23
SEC61A1-207ENST00000498837 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
SEC61A1-207ENST00000498837 hADV29S1A0JD25 119 aa7.36□□□□□ -1.23
SEC61A1-207ENST00000498837 HSBP1L1C9JCN9 74 aa7.36□□□□□ -1.23
SEC61A1-207ENST00000498837 VAMP3Q15836 100 aa7.36□□□□□ -1.23
SEC61A1-207ENST00000498837 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
SEC61A1-207ENST00000498837 KRTAP16-1A8MUX0 517 aa7.32□□□□□ -1.24
SEC61A1-207ENST00000498837 H3BUT2 72 aa7.32□□□□□ -1.24
SEC61A1-207ENST00000498837 SCGB1D1O95968 90 aa7.32□□□□□ -1.24
SEC61A1-207ENST00000498837 FAM236DA0A1B0GTK5 79 aa7.31□□□□□ -1.24
SEC61A1-207ENST00000498837 FAM236CP0DP71 79 aa7.31□□□□□ -1.24
SEC61A1-207ENST00000498837 COX8AP10176 69 aa7.31□□□□□ -1.24
SEC61A1-207ENST00000498837 DLEU1O43261 78 aa7.29□□□□□ -1.24
SEC61A1-207ENST00000498837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.29□□□□□ -1.24
SEC61A1-207ENST00000498837 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
SEC61A1-207ENST00000498837 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
SEC61A1-207ENST00000498837 C12orf57Q99622 126 aa7.28□□□□□ -1.24
SEC61A1-207ENST00000498837 DSCR10P59022 87 aa7.27□□□□□ -1.25
SEC61A1-207ENST00000498837 HIST1H4GQ99525 98 aa7.27□□□□□ -1.25
SEC61A1-207ENST00000498837 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
SEC61A1-207ENST00000498837 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
SEC61A1-207ENST00000498837 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
SEC61A1-207ENST00000498837 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
SEC61A1-207ENST00000498837 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
SEC61A1-207ENST00000498837 HRES1P13985 223 aa7.24□□□□□ -1.25
SEC61A1-207ENST00000498837 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
SEC61A1-207ENST00000498837 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
SEC61A1-207ENST00000498837 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
SEC61A1-207ENST00000498837 PAM16Q9Y3D7 125 aa7.23□□□□□ -1.25
SEC61A1-207ENST00000498837 A0A087WSZ3 146 aa7.22□□□□□ -1.25
SEC61A1-207ENST00000498837 SPATA45Q537H7 98 aa7.22□□□□□ -1.25
SEC61A1-207ENST00000498837 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
SEC61A1-207ENST00000498837 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
SEC61A1-207ENST00000498837 BVES-AS1Q5T3Y7 98 aa7.21□□□□□ -1.26
SEC61A1-207ENST00000498837 VAMP8Q9BV40 100 aa7.19□□□□□ -1.26
SEC61A1-207ENST00000498837 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
SEC61A1-207ENST00000498837 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
SEC61A1-207ENST00000498837 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
SEC61A1-207ENST00000498837 LINC00313P59037 77 aa7.17□□□□□ -1.26
SEC61A1-207ENST00000498837 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
SEC61A1-207ENST00000498837 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
SEC61A1-207ENST00000498837 FAM218AQ96MZ4 157 aa7.16□□□□□ -1.26
SEC61A1-207ENST00000498837 CEND1Q8N111 149 aa7.15□□□□□ -1.26
SEC61A1-207ENST00000498837 RAB37Q96AX2 223 aa7.15□□□□□ -1.26
SEC61A1-207ENST00000498837 PYY3Q5JQD4 70 aa7.14□□□□□ -1.27
SEC61A1-207ENST00000498837 H0YGX0 51 aa7.12□□□□□ -1.27
SEC61A1-207ENST00000498837 H3BMG7 143 aa7.12□□□□□ -1.27
SEC61A1-207ENST00000498837 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
SEC61A1-207ENST00000498837 FXYD2P54710 66 aa7.12□□□□□ -1.27
SEC61A1-207ENST00000498837 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
SEC61A1-207ENST00000498837 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
SEC61A1-207ENST00000498837 SNCGO76070 127 aa7.1□□□□□ -1.27
SEC61A1-207ENST00000498837 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
SEC61A1-207ENST00000498837 TMEM238LA0A1B0GVL6 79 aa7.08□□□□□ -1.28
SEC61A1-207ENST00000498837 A6NJY4 79 aa7.08□□□□□ -1.28
SEC61A1-207ENST00000498837 DEFB116Q30KQ4 102 aa7.08□□□□□ -1.28
SEC61A1-207ENST00000498837 TRIAP1O43715 76 aa7.07□□□□□ -1.28
SEC61A1-207ENST00000498837 A0A1B0GX51 115 aa7.06□□□□□ -1.28
SEC61A1-207ENST00000498837 FABP2P12104 132 aa7.06□□□□□ -1.28
SEC61A1-207ENST00000498837 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
SEC61A1-207ENST00000498837 HSD52Q0P140 79 aa7.05□□□□□ -1.28
SEC61A1-207ENST00000498837 IGHV6-1A0A0B4J1U7 121 aa7.04□□□□□ -1.28
SEC61A1-207ENST00000498837 K7ERJ3 54 aa7.03□□□□□ -1.28
SEC61A1-207ENST00000498837 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
SEC61A1-207ENST00000498837 GHRHP01286 108 aa7.02□□□□□ -1.29
SEC61A1-207ENST00000498837 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
SEC61A1-207ENST00000498837 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms