RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 CXCL6P80162 114 aa6.5□□□□□ -1.37
TSPAN1-209ENST00000498443 Q6ZRP5 223 aa6.5□□□□□ -1.37
TSPAN1-209ENST00000498443 SERP2Q8N6R1 65 aa6.5□□□□□ -1.37
TSPAN1-209ENST00000498443 USP17L23D6RBM5 183 aa6.49□□□□□ -1.37
TSPAN1-209ENST00000498443 CRYGAP11844 174 aa6.49□□□□□ -1.37
TSPAN1-209ENST00000498443 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
TSPAN1-209ENST00000498443 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
TSPAN1-209ENST00000498443 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
TSPAN1-209ENST00000498443 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
TSPAN1-209ENST00000498443 SS18L2Q9UHA2 77 aa6.47□□□□□ -1.37
TSPAN1-209ENST00000498443 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
TSPAN1-209ENST00000498443 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 ETDCA0A1B0GVM5 59 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 LCE2BO14633 110 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 Q6ZVQ6 151 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 C7orf33Q8WU49 177 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 DNAH8Q96JB1 4490 aa6.46□□□□□ -1.38
TSPAN1-209ENST00000498443 SPRR1AP35321 89 aa6.44□□□□□ -1.38
TSPAN1-209ENST00000498443 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
TSPAN1-209ENST00000498443 Q6ZRX8 168 aa6.44□□□□□ -1.38
TSPAN1-209ENST00000498443 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
TSPAN1-209ENST00000498443 PANO1I0J062 215 aa6.42□□□□□ -1.38
TSPAN1-209ENST00000498443 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
TSPAN1-209ENST00000498443 MRPL55Q7Z7F7 128 aaKnown RBP6.42□□□□□ -1.38
TSPAN1-209ENST00000498443 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
TSPAN1-209ENST00000498443 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
TSPAN1-209ENST00000498443 A0A087WVE0 104 aa6.41□□□□□ -1.38
TSPAN1-209ENST00000498443 TMEM258P61165 79 aa6.41□□□□□ -1.38
TSPAN1-209ENST00000498443 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
TSPAN1-209ENST00000498443 NREPQ16612 68 aa6.4□□□□□ -1.38
TSPAN1-209ENST00000498443 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
TSPAN1-209ENST00000498443 F8WEM9 126 aa6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 CHTF8P0CG12 524 aa6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 Q8N377 158 aa6.38□□□□□ -1.39
TSPAN1-209ENST00000498443 DEFB105AQ8NG35 78 aa6.37□□□□□ -1.39
TSPAN1-209ENST00000498443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.37□□□□□ -1.39
TSPAN1-209ENST00000498443 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
TSPAN1-209ENST00000498443 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
TSPAN1-209ENST00000498443 BPY2O14599 106 aa6.36□□□□□ -1.39
TSPAN1-209ENST00000498443 UBE2BP63146 152 aa6.36□□□□□ -1.39
TSPAN1-209ENST00000498443 FAM19A5Q7Z5A7 132 aaPredicted RBP6.36□□□□□ -1.39
TSPAN1-209ENST00000498443 J3KT08 172 aa6.35□□□□□ -1.39
TSPAN1-209ENST00000498443 NDUFC1O43677 76 aa6.35□□□□□ -1.39
TSPAN1-209ENST00000498443 LINC00474Q9P2X8 69 aa6.35□□□□□ -1.39
TSPAN1-209ENST00000498443 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
TSPAN1-209ENST00000498443 ERC2-IT1O76042 136 aa6.34□□□□□ -1.39
TSPAN1-209ENST00000498443 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
TSPAN1-209ENST00000498443 Q6ZSA8 131 aa6.34□□□□□ -1.39
TSPAN1-209ENST00000498443 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
TSPAN1-209ENST00000498443 C9orf163Q8N9P6 203 aa6.34□□□□□ -1.39
TSPAN1-209ENST00000498443 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
TSPAN1-209ENST00000498443 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
TSPAN1-209ENST00000498443 Q8NBF4 154 aa6.33□□□□□ -1.4
TSPAN1-209ENST00000498443 Q9BRP9 147 aa6.33□□□□□ -1.4
TSPAN1-209ENST00000498443 H0Y9J4 135 aa6.32□□□□□ -1.4
TSPAN1-209ENST00000498443 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
TSPAN1-209ENST00000498443 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
TSPAN1-209ENST00000498443 SPRR4Q96PI1 79 aa6.31□□□□□ -1.4
TSPAN1-209ENST00000498443 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
TSPAN1-209ENST00000498443 A0A096LNI7 61 aa6.3□□□□□ -1.4
TSPAN1-209ENST00000498443 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
TSPAN1-209ENST00000498443 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
TSPAN1-209ENST00000498443 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
TSPAN1-209ENST00000498443 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
TSPAN1-209ENST00000498443 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
TSPAN1-209ENST00000498443 IGLV8-61A0A075B6I0 122 aa6.28□□□□□ -1.4
TSPAN1-209ENST00000498443 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
TSPAN1-209ENST00000498443 A0A1W2PNM2 257 aa6.27□□□□□ -1.41
TSPAN1-209ENST00000498443 IGKV4-1P06312 121 aa6.27□□□□□ -1.41
TSPAN1-209ENST00000498443 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
TSPAN1-209ENST00000498443 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
TSPAN1-209ENST00000498443 SPRR1BP22528 89 aa6.26□□□□□ -1.41
TSPAN1-209ENST00000498443 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
TSPAN1-209ENST00000498443 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
TSPAN1-209ENST00000498443 DPH3Q96FX2 82 aa6.26□□□□□ -1.41
TSPAN1-209ENST00000498443 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
TSPAN1-209ENST00000498443 FAM236CP0DP71 79 aa6.25□□□□□ -1.41
TSPAN1-209ENST00000498443 UBE2AP49459 152 aa6.25□□□□□ -1.41
TSPAN1-209ENST00000498443 OXTP01178 125 aa6.23□□□□□ -1.41
TSPAN1-209ENST00000498443 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
TSPAN1-209ENST00000498443 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
TSPAN1-209ENST00000498443 HIGD2AQ9BW72 106 aa6.23□□□□□ -1.41
TSPAN1-209ENST00000498443 H7BZZ5 65 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 PRLHP81277 87 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 TMEM254Q8TBM7 123 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 OCR1Q9BZK8 76 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
TSPAN1-209ENST00000498443 LRP2P98164 4655 aa6.2□□□□□ -1.42
TSPAN1-209ENST00000498443 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
TSPAN1-209ENST00000498443 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
TSPAN1-209ENST00000498443 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
TSPAN1-209ENST00000498443 PHF5AQ7RTV0 110 aaKnown RBP6.19□□□□□ -1.42
TSPAN1-209ENST00000498443 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
TSPAN1-209ENST00000498443 Q8N9L7 120 aa6.18□□□□□ -1.42
TSPAN1-209ENST00000498443 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
TSPAN1-209ENST00000498443 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms