RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
NXF3-207ENST00000497850 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
NXF3-207ENST00000497850 Q6ZRX8 168 aa8.24□□□□□ -1.09
NXF3-207ENST00000497850 KTN1-AS1Q86SY8 53 aa8.24□□□□□ -1.09
NXF3-207ENST00000497850 TNP2Q05952 138 aa8.23□□□□□ -1.09
NXF3-207ENST00000497850 Q8NBF4 154 aa8.23□□□□□ -1.09
NXF3-207ENST00000497850 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
NXF3-207ENST00000497850 KRTAP4-16G5E9R7 235 aaPredicted RBP8.22□□□□□ -1.09
NXF3-207ENST00000497850 NDUFB1O75438 58 aa8.22□□□□□ -1.09
NXF3-207ENST00000497850 UBE2AP49459 152 aa8.22□□□□□ -1.09
NXF3-207ENST00000497850 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
NXF3-207ENST00000497850 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
NXF3-207ENST00000497850 C16orf90A8MZG2 172 aa8.22□□□□□ -1.09
NXF3-207ENST00000497850 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
NXF3-207ENST00000497850 HCG22E2RYF7 251 aa8.21□□□□□ -1.1
NXF3-207ENST00000497850 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.1
NXF3-207ENST00000497850 C1orf137Q5JT78 98 aa8.2□□□□□ -1.1
NXF3-207ENST00000497850 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
NXF3-207ENST00000497850 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
NXF3-207ENST00000497850 DNAH9Q9NYC9 4486 aa8.2□□□□□ -1.1
NXF3-207ENST00000497850 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
NXF3-207ENST00000497850 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
NXF3-207ENST00000497850 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
NXF3-207ENST00000497850 CHKB-CPT1BH3BT56 60 aa8.19□□□□□ -1.1
NXF3-207ENST00000497850 DHRS4-AS1Q9P1J3 65 aa8.19□□□□□ -1.1
NXF3-207ENST00000497850 SPRR1AP35321 89 aa8.18□□□□□ -1.1
NXF3-207ENST00000497850 A0A096LNI7 61 aa8.18□□□□□ -1.1
NXF3-207ENST00000497850 A0A0G2JQZ4 141 aa8.17□□□□□ -1.1
NXF3-207ENST00000497850 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
NXF3-207ENST00000497850 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
NXF3-207ENST00000497850 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
NXF3-207ENST00000497850 LIMD2Q9BT23 127 aa8.17□□□□□ -1.1
NXF3-207ENST00000497850 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
NXF3-207ENST00000497850 REG3GQ6UW15 175 aa8.15□□□□□ -1.1
NXF3-207ENST00000497850 LCA10Q71F78 164 aa8.15□□□□□ -1.1
NXF3-207ENST00000497850 LINC00208Q96KT6 92 aa8.15□□□□□ -1.1
NXF3-207ENST00000497850 PRLHP81277 87 aa8.15□□□□□ -1.1
NXF3-207ENST00000497850 DNAH7Q8WXX0 4024 aa8.15□□□□□ -1.11
NXF3-207ENST00000497850 MP68P56378 58 aa8.14□□□□□ -1.11
NXF3-207ENST00000497850 SPANXA2-OT1Q8N9U9 137 aa8.14□□□□□ -1.11
NXF3-207ENST00000497850 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
NXF3-207ENST00000497850 A6NN06 94 aa8.13□□□□□ -1.11
NXF3-207ENST00000497850 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
NXF3-207ENST00000497850 TENM2Q9NT68 2774 aa8.13□□□□□ -1.11
NXF3-207ENST00000497850 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
NXF3-207ENST00000497850 Q75L30 129 aa8.12□□□□□ -1.11
NXF3-207ENST00000497850 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
NXF3-207ENST00000497850 APLNQ9ULZ1 77 aa8.12□□□□□ -1.11
NXF3-207ENST00000497850 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
NXF3-207ENST00000497850 NDUFS5O43920 106 aa8.1□□□□□ -1.11
NXF3-207ENST00000497850 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
NXF3-207ENST00000497850 MDFIQ99750 246 aa8.1□□□□□ -1.11
NXF3-207ENST00000497850 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.11
NXF3-207ENST00000497850 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
NXF3-207ENST00000497850 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
NXF3-207ENST00000497850 A6NED7 52 aa8.07□□□□□ -1.12
NXF3-207ENST00000497850 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
NXF3-207ENST00000497850 H0Y9P7 68 aa8.07□□□□□ -1.12
NXF3-207ENST00000497850 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
NXF3-207ENST00000497850 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
NXF3-207ENST00000497850 H3BPC8 53 aa8.05□□□□□ -1.12
NXF3-207ENST00000497850 SRRM2Q9UQ35 2752 aaKnown RBP8.05□□□□□ -1.12
NXF3-207ENST00000497850 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
NXF3-207ENST00000497850 PLECQ15149 4684 aaKnown RBP8.03□□□□□ -1.12
NXF3-207ENST00000497850 IGFL1Q6UW32 110 aa8.03□□□□□ -1.12
NXF3-207ENST00000497850 COA5Q86WW8 74 aa8.03□□□□□ -1.12
NXF3-207ENST00000497850 PANO1I0J062 215 aa8.02□□□□□ -1.13
NXF3-207ENST00000497850 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
NXF3-207ENST00000497850 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
NXF3-207ENST00000497850 DYNC2H1Q8NCM8 4307 aaKnown RBP8□□□□□ -1.13
NXF3-207ENST00000497850 NBDYA0A0U1RRE5 68 aa7.99□□□□□ -1.13
NXF3-207ENST00000497850 MOBPQ13875 183 aa7.99□□□□□ -1.13
NXF3-207ENST00000497850 A0A087WSZ3 146 aa7.99□□□□□ -1.13
NXF3-207ENST00000497850 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
NXF3-207ENST00000497850 CASC2Q6XLA1 102 aa7.99□□□□□ -1.13
NXF3-207ENST00000497850 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
NXF3-207ENST00000497850 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.13
NXF3-207ENST00000497850 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
NXF3-207ENST00000497850 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
NXF3-207ENST00000497850 STARD9Q9P2P6 4700 aa7.94□□□□□ -1.14
NXF3-207ENST00000497850 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
NXF3-207ENST00000497850 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
NXF3-207ENST00000497850 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
NXF3-207ENST00000497850 SPINK7P58062 85 aa7.91□□□□□ -1.14
NXF3-207ENST00000497850 PRKDCP78527 4128 aaKnown RBP7.91□□□□□ -1.14
NXF3-207ENST00000497850 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
NXF3-207ENST00000497850 A8MWP4 228 aa7.9□□□□□ -1.14
NXF3-207ENST00000497850 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
NXF3-207ENST00000497850 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
NXF3-207ENST00000497850 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
NXF3-207ENST00000497850 H0Y9J4 135 aa7.87□□□□□ -1.15
NXF3-207ENST00000497850 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
NXF3-207ENST00000497850 KMT2AQ03164 3969 aa7.86□□□□□ -1.15
NXF3-207ENST00000497850 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
NXF3-207ENST00000497850 SPRR1BP22528 89 aa7.86□□□□□ -1.15
NXF3-207ENST00000497850 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
NXF3-207ENST00000497850 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
NXF3-207ENST00000497850 VPS13DQ5THJ4 4388 aa7.85□□□□□ -1.15
NXF3-207ENST00000497850 A0A087WTM6 91 aa7.85□□□□□ -1.15
NXF3-207ENST00000497850 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms