RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-204ENST00000497755 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
CLIC4-204ENST00000497755 ANKRD39Q53RE8 183 aa11.1□□□□□ -0.63
CLIC4-204ENST00000497755 LINC00575Q6W349 94 aa11.09□□□□□ -0.63
CLIC4-204ENST00000497755 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
CLIC4-204ENST00000497755 Q96NJ1 140 aa11.08□□□□□ -0.64
CLIC4-204ENST00000497755 Q6ZQY7 126 aa11.07□□□□□ -0.64
CLIC4-204ENST00000497755 SLC7A5P1Q8MH63 180 aa11.07□□□□□ -0.64
CLIC4-204ENST00000497755 VAMP3Q15836 100 aa11.06□□□□□ -0.64
CLIC4-204ENST00000497755 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
CLIC4-204ENST00000497755 KRTDAPP60985 99 aa11.04□□□□□ -0.64
CLIC4-204ENST00000497755 C20orf166-AS1Q96NR2 134 aa11.03□□□□□ -0.64
CLIC4-204ENST00000497755 LST1O00453 97 aa11.02□□□□□ -0.65
CLIC4-204ENST00000497755 MT2AP02795 61 aa11.01□□□□□ -0.65
CLIC4-204ENST00000497755 SYNE2Q8WXH0 6885 aaKnown RBP11□□□□□ -0.65
CLIC4-204ENST00000497755 TRBV20-1A0A075B6N2 111 aa11□□□□□ -0.65
CLIC4-204ENST00000497755 A8MUU9 505 aa11□□□□□ -0.65
CLIC4-204ENST00000497755 KRTAP19-1Q8IUB9 90 aa10.99□□□□□ -0.65
CLIC4-204ENST00000497755 ATOH7Q8N100 152 aa10.99□□□□□ -0.65
CLIC4-204ENST00000497755 LCE2BO14633 110 aa10.98□□□□□ -0.65
CLIC4-204ENST00000497755 MACF1Q9UPN3 7388 aaKnown RBP10.97□□□□□ -0.65
CLIC4-204ENST00000497755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
CLIC4-204ENST00000497755 H3BUT2 72 aa10.94□□□□□ -0.66
CLIC4-204ENST00000497755 MT1FP04733 61 aa10.93□□□□□ -0.66
CLIC4-204ENST00000497755 SNHG12Q9BXW3 62 aa10.93□□□□□ -0.66
CLIC4-204ENST00000497755 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
CLIC4-204ENST00000497755 PPDPFLQ8WWR9 84 aa10.92□□□□□ -0.66
CLIC4-204ENST00000497755 KRTAP9-3Q9BYQ3 159 aa10.91□□□□□ -0.66
CLIC4-204ENST00000497755 KRTAP16-1A8MUX0 517 aa10.88□□□□□ -0.67
CLIC4-204ENST00000497755 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
CLIC4-204ENST00000497755 SCGB1D1O95968 90 aa10.87□□□□□ -0.67
CLIC4-204ENST00000497755 KRTAP10-10P60014 251 aa10.84□□□□□ -0.67
CLIC4-204ENST00000497755 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
CLIC4-204ENST00000497755 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
CLIC4-204ENST00000497755 DSCR10P59022 87 aa10.83□□□□□ -0.68
CLIC4-204ENST00000497755 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
CLIC4-204ENST00000497755 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
CLIC4-204ENST00000497755 TEN1Q86WV5 123 aa10.82□□□□□ -0.68
CLIC4-204ENST00000497755 MPLKIPQ8TAP9 179 aa10.8□□□□□ -0.68
CLIC4-204ENST00000497755 A0A087WSZ3 146 aa10.79□□□□□ -0.68
CLIC4-204ENST00000497755 C12orf57Q99622 126 aa10.77□□□□□ -0.69
CLIC4-204ENST00000497755 HRES1P13985 223 aa10.76□□□□□ -0.69
CLIC4-204ENST00000497755 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
CLIC4-204ENST00000497755 RBM12B-AS1Q9P1G2 102 aa10.75□□□□□ -0.69
CLIC4-204ENST00000497755 S100A1P23297 94 aa10.74□□□□□ -0.69
CLIC4-204ENST00000497755 LINC00313P59037 77 aa10.73□□□□□ -0.69
CLIC4-204ENST00000497755 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
CLIC4-204ENST00000497755 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
CLIC4-204ENST00000497755 HSBP1L1C9JCN9 74 aa10.67□□□□□ -0.7
CLIC4-204ENST00000497755 H3BMG7 143 aa10.67□□□□□ -0.7
CLIC4-204ENST00000497755 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
CLIC4-204ENST00000497755 HIST1H4GQ99525 98 aa10.67□□□□□ -0.7
CLIC4-204ENST00000497755 KRTAP19-6Q3LI70 58 aa10.66□□□□□ -0.7
CLIC4-204ENST00000497755 A0A1W2PNM2 257 aa10.65□□□□□ -0.7
CLIC4-204ENST00000497755 SNCGO76070 127 aa10.64□□□□□ -0.71
CLIC4-204ENST00000497755 H0YGX0 51 aa10.63□□□□□ -0.71
CLIC4-204ENST00000497755 IGKV4-1P06312 121 aa10.63□□□□□ -0.71
CLIC4-204ENST00000497755 LINC00846Q9NV44 126 aa10.63□□□□□ -0.71
CLIC4-204ENST00000497755 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
CLIC4-204ENST00000497755 FABP2P12104 132 aa10.58□□□□□ -0.72
CLIC4-204ENST00000497755 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
CLIC4-204ENST00000497755 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
CLIC4-204ENST00000497755 DEFB116Q30KQ4 102 aa10.55□□□□□ -0.72
CLIC4-204ENST00000497755 GHRHP01286 108 aa10.54□□□□□ -0.72
CLIC4-204ENST00000497755 TRBV7-4A0A0J9YYF1 115 aa10.53□□□□□ -0.72
CLIC4-204ENST00000497755 COX8AP10176 69 aa10.53□□□□□ -0.72
CLIC4-204ENST00000497755 LINC00472Q9H8W2 130 aa10.53□□□□□ -0.72
CLIC4-204ENST00000497755 A0A1B0GX51 115 aa10.52□□□□□ -0.73
CLIC4-204ENST00000497755 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
CLIC4-204ENST00000497755 IGHV6-1A0A0B4J1U7 121 aa10.51□□□□□ -0.73
CLIC4-204ENST00000497755 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
CLIC4-204ENST00000497755 S100A2P29034 98 aa10.51□□□□□ -0.73
CLIC4-204ENST00000497755 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
CLIC4-204ENST00000497755 DLEU1O43261 78 aa10.48□□□□□ -0.73
CLIC4-204ENST00000497755 KRTAP6-3Q3LI67 103 aa10.47□□□□□ -0.73
CLIC4-204ENST00000497755 SPINK7P58062 85 aa10.45□□□□□ -0.74
CLIC4-204ENST00000497755 A0A1B0GV72 72 aa10.44□□□□□ -0.74
CLIC4-204ENST00000497755 A8MWP4 228 aa10.42□□□□□ -0.74
CLIC4-204ENST00000497755 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
CLIC4-204ENST00000497755 C14orf144Q96I85 54 aa10.41□□□□□ -0.74
CLIC4-204ENST00000497755 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
CLIC4-204ENST00000497755 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
CLIC4-204ENST00000497755 A0A1B0GVX0 72 aa10.39□□□□□ -0.75
CLIC4-204ENST00000497755 C8orf87E5RJ46 101 aa10.39□□□□□ -0.75
CLIC4-204ENST00000497755 CCKP06307 115 aa10.39□□□□□ -0.75
CLIC4-204ENST00000497755 TRIAP1O43715 76 aa10.38□□□□□ -0.75
CLIC4-204ENST00000497755 TRACP01848 142 aa10.38□□□□□ -0.75
CLIC4-204ENST00000497755 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
CLIC4-204ENST00000497755 ORMDL1Q9P0S3 153 aa10.37□□□□□ -0.75
CLIC4-204ENST00000497755 NEBP20929 6669 aa10.36□□□□□ -0.75
CLIC4-204ENST00000497755 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms