RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 Q6ZRX8 168 aa9.6□□□□□ -0.87
CTDSP1-214ENST00000497677 B5MCH6 92 aa9.59□□□□□ -0.87
CTDSP1-214ENST00000497677 BCE1O60756 84 aa9.59□□□□□ -0.87
CTDSP1-214ENST00000497677 ETDBQ3ZM63 59 aa9.59□□□□□ -0.87
CTDSP1-214ENST00000497677 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
CTDSP1-214ENST00000497677 J3QR89 54 aa9.57□□□□□ -0.88
CTDSP1-214ENST00000497677 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
CTDSP1-214ENST00000497677 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
CTDSP1-214ENST00000497677 K7ERU9 68 aa9.55□□□□□ -0.88
CTDSP1-214ENST00000497677 Q6ZQY7 126 aa9.54□□□□□ -0.88
CTDSP1-214ENST00000497677 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
CTDSP1-214ENST00000497677 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
CTDSP1-214ENST00000497677 Q9BRP9 147 aa9.5□□□□□ -0.89
CTDSP1-214ENST00000497677 UBE2AP49459 152 aa9.49□□□□□ -0.89
CTDSP1-214ENST00000497677 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
CTDSP1-214ENST00000497677 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
CTDSP1-214ENST00000497677 OBSCN-AS1Q96MR7 158 aa9.47□□□□□ -0.89
CTDSP1-214ENST00000497677 PRLHP81277 87 aa9.46□□□□□ -0.9
CTDSP1-214ENST00000497677 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.9
CTDSP1-214ENST00000497677 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
CTDSP1-214ENST00000497677 A0A087X002 238 aa9.45□□□□□ -0.9
CTDSP1-214ENST00000497677 ANAPC11Q9NYG5 84 aa9.44□□□□□ -0.9
CTDSP1-214ENST00000497677 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
CTDSP1-214ENST00000497677 PDE6GP18545 87 aa9.43□□□□□ -0.9
CTDSP1-214ENST00000497677 LRP2P98164 4655 aa9.43□□□□□ -0.9
CTDSP1-214ENST00000497677 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
CTDSP1-214ENST00000497677 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
CTDSP1-214ENST00000497677 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
CTDSP1-214ENST00000497677 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
CTDSP1-214ENST00000497677 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
CTDSP1-214ENST00000497677 ACYP1P07311 99 aa9.4□□□□□ -0.9
CTDSP1-214ENST00000497677 CRYGAP11844 174 aa9.4□□□□□ -0.9
CTDSP1-214ENST00000497677 Q8N377 158 aa9.4□□□□□ -0.9
CTDSP1-214ENST00000497677 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 KRTAP13-2Q52LG2 175 aa9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 DEFB105AQ8NG35 78 aa9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
CTDSP1-214ENST00000497677 FAM229BQ4G0N7 80 aa9.38□□□□□ -0.91
CTDSP1-214ENST00000497677 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
CTDSP1-214ENST00000497677 SPRR1BP22528 89 aa9.37□□□□□ -0.91
CTDSP1-214ENST00000497677 ST20-AS1Q8NBB2 130 aa9.36□□□□□ -0.91
CTDSP1-214ENST00000497677 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
CTDSP1-214ENST00000497677 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
CTDSP1-214ENST00000497677 F8WEM9 126 aa9.35□□□□□ -0.91
CTDSP1-214ENST00000497677 CCKP06307 115 aa9.34□□□□□ -0.91
CTDSP1-214ENST00000497677 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
CTDSP1-214ENST00000497677 SPRR4Q96PI1 79 aa9.32□□□□□ -0.92
CTDSP1-214ENST00000497677 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
CTDSP1-214ENST00000497677 Q6ZQT0 140 aa9.31□□□□□ -0.92
CTDSP1-214ENST00000497677 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
CTDSP1-214ENST00000497677 A0A1B0GW54 56 aa9.29□□□□□ -0.92
CTDSP1-214ENST00000497677 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
CTDSP1-214ENST00000497677 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
CTDSP1-214ENST00000497677 A0A1B0GV72 72 aa9.28□□□□□ -0.92
CTDSP1-214ENST00000497677 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
CTDSP1-214ENST00000497677 VPS25Q9BRG1 176 aa9.28□□□□□ -0.92
CTDSP1-214ENST00000497677 LPAP08519 4548 aa9.27□□□□□ -0.92
CTDSP1-214ENST00000497677 Q6JHZ5 121 aa9.27□□□□□ -0.93
CTDSP1-214ENST00000497677 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
CTDSP1-214ENST00000497677 PRR4Q16378 134 aa9.22□□□□□ -0.93
CTDSP1-214ENST00000497677 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
CTDSP1-214ENST00000497677 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
CTDSP1-214ENST00000497677 LINC00643Q86TS7 51 aa9.19□□□□□ -0.94
CTDSP1-214ENST00000497677 Q8NBF4 154 aa9.19□□□□□ -0.94
CTDSP1-214ENST00000497677 LINC00846Q9NV44 126 aa9.18□□□□□ -0.94
CTDSP1-214ENST00000497677 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
CTDSP1-214ENST00000497677 SIGMAR1Q99720 223 aa9.17□□□□□ -0.94
CTDSP1-214ENST00000497677 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
CTDSP1-214ENST00000497677 Q6Q795 121 aa9.16□□□□□ -0.94
CTDSP1-214ENST00000497677 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
CTDSP1-214ENST00000497677 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
CTDSP1-214ENST00000497677 A0A1W2PNM2 257 aa9.14□□□□□ -0.95
CTDSP1-214ENST00000497677 C9orf153Q5TBE3 101 aa9.14□□□□□ -0.95
CTDSP1-214ENST00000497677 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
CTDSP1-214ENST00000497677 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
CTDSP1-214ENST00000497677 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
CTDSP1-214ENST00000497677 TRBV7-7A0A0K0K1E9 115 aa9.11□□□□□ -0.95
CTDSP1-214ENST00000497677 MOBPQ13875 183 aa9.11□□□□□ -0.95
CTDSP1-214ENST00000497677 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
CTDSP1-214ENST00000497677 NREPQ16612 68 aa9.09□□□□□ -0.95
CTDSP1-214ENST00000497677 Q6ZVQ6 151 aa9.09□□□□□ -0.95
CTDSP1-214ENST00000497677 IMUPQ9GZP8 106 aa9.09□□□□□ -0.95
CTDSP1-214ENST00000497677 SPINK1P00995 79 aa9.08□□□□□ -0.96
CTDSP1-214ENST00000497677 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
CTDSP1-214ENST00000497677 MT-ATP8P03928 68 aa9.06□□□□□ -0.96
CTDSP1-214ENST00000497677 CXCL6P80162 114 aa9.06□□□□□ -0.96
CTDSP1-214ENST00000497677 CD164Q04900 197 aa9.06□□□□□ -0.96
CTDSP1-214ENST00000497677 SS18L2Q9UHA2 77 aa9.04□□□□□ -0.96
CTDSP1-214ENST00000497677 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
CTDSP1-214ENST00000497677 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
CTDSP1-214ENST00000497677 A0A087WSZ3 146 aa9.02□□□□□ -0.97
CTDSP1-214ENST00000497677 SCGB1A1P11684 91 aa9.01□□□□□ -0.97
CTDSP1-214ENST00000497677 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
CTDSP1-214ENST00000497677 A0A0G2JQZ4 141 aa9□□□□□ -0.97
CTDSP1-214ENST00000497677 BPY2O14599 106 aa8.99□□□□□ -0.97
CTDSP1-214ENST00000497677 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
CTDSP1-214ENST00000497677 J3KT08 172 aa8.96□□□□□ -0.98
CTDSP1-214ENST00000497677 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms