RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 PLAC8Q9NZF1 115 aa12.25□□□□□ -0.45
ACTN4-208ENST00000497637 LRP2P98164 4655 aa12.24□□□□□ -0.45
ACTN4-208ENST00000497637 Q6ZSA8 131 aa12.24□□□□□ -0.45
ACTN4-208ENST00000497637 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
ACTN4-208ENST00000497637 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
ACTN4-208ENST00000497637 H0Y9J4 135 aa12.22□□□□□ -0.45
ACTN4-208ENST00000497637 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
ACTN4-208ENST00000497637 RBM3P98179 157 aaKnown RBP12.22□□□□□ -0.45
ACTN4-208ENST00000497637 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
ACTN4-208ENST00000497637 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
ACTN4-208ENST00000497637 Q8N377 158 aa12.21□□□□□ -0.45
ACTN4-208ENST00000497637 IGLV5-48A0A075B6I7 105 aa12.2□□□□□ -0.46
ACTN4-208ENST00000497637 ERC2-IT1O76042 136 aa12.2□□□□□ -0.46
ACTN4-208ENST00000497637 CCKP06307 115 aa12.2□□□□□ -0.46
ACTN4-208ENST00000497637 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
ACTN4-208ENST00000497637 LOC110117498A0A087WWA1 95 aa12.19□□□□□ -0.46
ACTN4-208ENST00000497637 GAGE2AQ6NT46 116 aa12.19□□□□□ -0.46
ACTN4-208ENST00000497637 A0A1B0GV72 72 aa12.18□□□□□ -0.46
ACTN4-208ENST00000497637 BCE1O60756 84 aa12.18□□□□□ -0.46
ACTN4-208ENST00000497637 KRTAP10-4P60372 401 aaPredicted RBP12.18□□□□□ -0.46
ACTN4-208ENST00000497637 SIGMAR1Q99720 223 aa12.18□□□□□ -0.46
ACTN4-208ENST00000497637 PDE6GP18545 87 aa12.17□□□□□ -0.46
ACTN4-208ENST00000497637 PRLHP81277 87 aa12.17□□□□□ -0.46
ACTN4-208ENST00000497637 ST20-AS1Q8NBB2 130 aa12.17□□□□□ -0.46
ACTN4-208ENST00000497637 DEFB105AQ8NG35 78 aa12.17□□□□□ -0.46
ACTN4-208ENST00000497637 Q6ZQT0 140 aa12.15□□□□□ -0.46
ACTN4-208ENST00000497637 PKHD1L1Q86WI1 4243 aa12.14□□□□□ -0.47
ACTN4-208ENST00000497637 UBE2AP49459 152 aa12.14□□□□□ -0.47
ACTN4-208ENST00000497637 DSCR8Q96T75 97 aa12.14□□□□□ -0.47
ACTN4-208ENST00000497637 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
ACTN4-208ENST00000497637 C21orf62-AS1Q17RA5 79 aa12.13□□□□□ -0.47
ACTN4-208ENST00000497637 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
ACTN4-208ENST00000497637 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
ACTN4-208ENST00000497637 SCXQ7RTU7 201 aa12.11□□□□□ -0.47
ACTN4-208ENST00000497637 MT-ATP8P03928 68 aa12.08□□□□□ -0.48
ACTN4-208ENST00000497637 SPRR1BP22528 89 aa12.06□□□□□ -0.48
ACTN4-208ENST00000497637 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
ACTN4-208ENST00000497637 LINC00643Q86TS7 51 aa12.06□□□□□ -0.48
ACTN4-208ENST00000497637 LINC00846Q9NV44 126 aa12.06□□□□□ -0.48
ACTN4-208ENST00000497637 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
ACTN4-208ENST00000497637 MT1HL1P0DM35 61 aa12.05□□□□□ -0.48
ACTN4-208ENST00000497637 C3orf22Q8N5N4 141 aa12.03□□□□□ -0.48
ACTN4-208ENST00000497637 CIRBP-AS1Q8TBR5 109 aa12.03□□□□□ -0.48
ACTN4-208ENST00000497637 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
ACTN4-208ENST00000497637 C1orf137Q5JT78 98 aa12□□□□□ -0.49
ACTN4-208ENST00000497637 KRTAP9-2Q9BYQ4 174 aa12□□□□□ -0.49
ACTN4-208ENST00000497637 TNXBP22105 4242 aa11.98□□□□□ -0.49
ACTN4-208ENST00000497637 IGLV8-61A0A075B6I0 122 aa11.98□□□□□ -0.49
ACTN4-208ENST00000497637 F8WEM9 126 aa11.98□□□□□ -0.49
ACTN4-208ENST00000497637 ZNF861PO60384 105 aa11.98□□□□□ -0.49
ACTN4-208ENST00000497637 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
ACTN4-208ENST00000497637 Q6JHZ5 121 aa11.96□□□□□ -0.49
ACTN4-208ENST00000497637 Q6Q795 121 aa11.95□□□□□ -0.5
ACTN4-208ENST00000497637 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
ACTN4-208ENST00000497637 A0A1B0GW54 56 aa11.94□□□□□ -0.5
ACTN4-208ENST00000497637 IGLV7-43P04211 117 aa11.94□□□□□ -0.5
ACTN4-208ENST00000497637 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
ACTN4-208ENST00000497637 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
ACTN4-208ENST00000497637 ZNF706Q9Y5V0 76 aaPredicted RBP11.94□□□□□ -0.5
ACTN4-208ENST00000497637 A0A1W2PNM2 257 aa11.92□□□□□ -0.5
ACTN4-208ENST00000497637 LINC00483Q53H64 154 aa11.92□□□□□ -0.5
ACTN4-208ENST00000497637 Q8NBF4 154 aa11.91□□□□□ -0.5
ACTN4-208ENST00000497637 IMUPQ9GZP8 106 aa11.91□□□□□ -0.5
ACTN4-208ENST00000497637 KRTAP9-6A0A140TA67 174 aa11.9□□□□□ -0.5
ACTN4-208ENST00000497637 ATP5EP2Q5VTU8 51 aa11.89□□□□□ -0.51
ACTN4-208ENST00000497637 IGFL1Q6UW32 110 aa11.88□□□□□ -0.51
ACTN4-208ENST00000497637 Q6ZVQ6 151 aa11.88□□□□□ -0.51
ACTN4-208ENST00000497637 IGKV3D-7A0A0C4DH55 119 aa11.85□□□□□ -0.51
ACTN4-208ENST00000497637 CRYGAP11844 174 aa11.84□□□□□ -0.51
ACTN4-208ENST00000497637 NREPQ16612 68 aa11.8□□□□□ -0.52
ACTN4-208ENST00000497637 A0A0G2JQZ4 141 aa11.79□□□□□ -0.52
ACTN4-208ENST00000497637 PCP4P48539 62 aa11.78□□□□□ -0.52
ACTN4-208ENST00000497637 CXCL6P80162 114 aa11.77□□□□□ -0.53
ACTN4-208ENST00000497637 IGLV9-49A0A0B4J1Y8 123 aa11.73□□□□□ -0.53
ACTN4-208ENST00000497637 C9orf153Q5TBE3 101 aa11.73□□□□□ -0.53
ACTN4-208ENST00000497637 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
ACTN4-208ENST00000497637 A0A0U1RQV1 116 aa11.69□□□□□ -0.54
ACTN4-208ENST00000497637 A0A087WSZ3 146 aa11.68□□□□□ -0.54
ACTN4-208ENST00000497637 BPY2O14599 106 aa11.68□□□□□ -0.54
ACTN4-208ENST00000497637 HIST1H4AP62805 103 aaKnown RBP11.68□□□□□ -0.54
ACTN4-208ENST00000497637 MOBPQ13875 183 aa11.68□□□□□ -0.54
ACTN4-208ENST00000497637 FAT4Q6V0I7 4981 aa11.67□□□□□ -0.54
ACTN4-208ENST00000497637 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
ACTN4-208ENST00000497637 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
ACTN4-208ENST00000497637 FAM229BQ4G0N7 80 aa11.65□□□□□ -0.54
ACTN4-208ENST00000497637 A0A087WVE0 104 aa11.64□□□□□ -0.55
ACTN4-208ENST00000497637 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
ACTN4-208ENST00000497637 MUC2Q02817 5179 aa11.63□□□□□ -0.55
ACTN4-208ENST00000497637 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
ACTN4-208ENST00000497637 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
ACTN4-208ENST00000497637 IGKV4-1P06312 121 aa11.58□□□□□ -0.56
ACTN4-208ENST00000497637 KRTAP1-4P0C5Y4 121 aa11.58□□□□□ -0.56
ACTN4-208ENST00000497637 KRTAP10-8P60410 259 aa11.58□□□□□ -0.56
ACTN4-208ENST00000497637 CD164Q04900 197 aa11.57□□□□□ -0.56
ACTN4-208ENST00000497637 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
ACTN4-208ENST00000497637 DSCR10P59022 87 aa11.56□□□□□ -0.56
ACTN4-208ENST00000497637 ATOX1O00244 68 aa11.55□□□□□ -0.56
ACTN4-208ENST00000497637 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
ACTN4-208ENST00000497637 HRCT1Q6UXD1 115 aa11.54□□□□□ -0.56
ACTN4-208ENST00000497637 SS18L2Q9UHA2 77 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms