RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 IGLV4-60A0A075B6I1 120 aa3.67□□□□□ -1.82
CACNA1C-229ENST00000496818 ERC2-IT1O76042 136 aa3.67□□□□□ -1.82
CACNA1C-229ENST00000496818 ENHOQ6UWT2 76 aa3.67□□□□□ -1.82
CACNA1C-229ENST00000496818 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
CACNA1C-229ENST00000496818 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
CACNA1C-229ENST00000496818 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 CNBPP62633 177 aaKnown RBP3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 CXCL6P80162 114 aa3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
CACNA1C-229ENST00000496818 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 A0A1B0GW54 56 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 LINC00158P58513 81 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 REG3AQ06141 175 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 SS18Q15532 418 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 Q8IZM0 81 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 LINC00269Q8N2A0 174 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 PRR34Q9NV39 138 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 LAMTOR3Q9UHA4 124 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 PKIGQ9Y2B9 76 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
CACNA1C-229ENST00000496818 IGLV10-54A0A075B6I4 117 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 IGKV2-28A0A075B6P5 120 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 IGKV2D-28P01615 120 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 SPACA4Q8TDM5 124 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 LINC00846Q9NV44 126 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 TOMM7Q9P0U1 55 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
CACNA1C-229ENST00000496818 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 A0A087WYN8 130 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 IGKV3OR2-268A0A0C4DH90 116 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 PANO1I0J062 215 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 C6orf226Q5I0X4 101 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 CD164L2Q6UWJ8 174 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 FAM218AQ96MZ4 157 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 C14orf132Q9NPU4 83 aa3.63□□□□□ -1.83
CACNA1C-229ENST00000496818 CHTF8P0CG12 524 aa3.62□□□□□ -1.83
CACNA1C-229ENST00000496818 XCL1P47992 114 aa3.62□□□□□ -1.83
CACNA1C-229ENST00000496818 PRR3P79522 188 aaKnown RBP3.62□□□□□ -1.83
CACNA1C-229ENST00000496818 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
CACNA1C-229ENST00000496818 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
CACNA1C-229ENST00000496818 IGKV2-24A0A0C4DH68 120 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 PFN2P35080 140 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 KRTAP26-1Q6PEX3 210 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
CACNA1C-229ENST00000496818 HIGD2BQ4VC39 106 aa3.6□□□□□ -1.83
CACNA1C-229ENST00000496818 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
CACNA1C-229ENST00000496818 CHCHD10Q8WYQ3 142 aaPredicted RBP3.6□□□□□ -1.83
CACNA1C-229ENST00000496818 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
CACNA1C-229ENST00000496818 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 IGKV3D-7A0A0C4DH55 119 aa3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 H7BZZ5 65 aa3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 Q5XG85 94 aa3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
CACNA1C-229ENST00000496818 GVQW2A0A096LPI5 108 aaPredicted RBP3.58□□□□□ -1.84
CACNA1C-229ENST00000496818 F8WDY8 70 aa3.58□□□□□ -1.84
CACNA1C-229ENST00000496818 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
CACNA1C-229ENST00000496818 Q6ZQT0 140 aa3.58□□□□□ -1.84
CACNA1C-229ENST00000496818 Q6ZRP5 223 aa3.58□□□□□ -1.84
CACNA1C-229ENST00000496818 A0A096LNI7 61 aa3.57□□□□□ -1.84
CACNA1C-229ENST00000496818 NCR3O14931 201 aa3.57□□□□□ -1.84
CACNA1C-229ENST00000496818 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
CACNA1C-229ENST00000496818 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
CACNA1C-229ENST00000496818 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
CACNA1C-229ENST00000496818 A0A087WVE0 104 aa3.55□□□□□ -1.84
CACNA1C-229ENST00000496818 TRBV7-4A0A0J9YYF1 115 aa3.55□□□□□ -1.84
CACNA1C-229ENST00000496818 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
CACNA1C-229ENST00000496818 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 A0A0U1RQV1 116 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 COX7BP24311 80 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 SYCNQ0VAF6 134 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 C9orf129Q5T035 196 aaKnown RBP3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 Q6ZVQ6 151 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 Q8NDZ9 215 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 V9GYY9 64 aa3.54□□□□□ -1.84
CACNA1C-229ENST00000496818 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
CACNA1C-229ENST00000496818 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
CACNA1C-229ENST00000496818 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
CACNA1C-229ENST00000496818 CAMK2N2Q96S95 79 aa3.53□□□□□ -1.84
CACNA1C-229ENST00000496818 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms