RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 F8WEM9 126 aa6.97□□□□□ -1.29
FN1-226ENST00000496542 SNRPEP62304 92 aaKnown RBP6.97□□□□□ -1.29
FN1-226ENST00000496542 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
FN1-226ENST00000496542 VAMP3Q15836 100 aa6.96□□□□□ -1.3
FN1-226ENST00000496542 TCL1BO95988 128 aa6.95□□□□□ -1.3
FN1-226ENST00000496542 MT1HP80294 61 aa6.95□□□□□ -1.3
FN1-226ENST00000496542 HSBP1L1C9JCN9 74 aa6.94□□□□□ -1.3
FN1-226ENST00000496542 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
FN1-226ENST00000496542 S100A2P29034 98 aa6.93□□□□□ -1.3
FN1-226ENST00000496542 RPL37P61927 97 aaKnown RBP6.93□□□□□ -1.3
FN1-226ENST00000496542 Q6ZQY7 126 aa6.93□□□□□ -1.3
FN1-226ENST00000496542 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
FN1-226ENST00000496542 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
FN1-226ENST00000496542 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
FN1-226ENST00000496542 Q6JHZ5 121 aa6.9□□□□□ -1.3
FN1-226ENST00000496542 C12orf57Q99622 126 aa6.9□□□□□ -1.3
FN1-226ENST00000496542 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
FN1-226ENST00000496542 CLEC2BQ92478 149 aa6.89□□□□□ -1.31
FN1-226ENST00000496542 TRBV7-7A0A0K0K1E9 115 aa6.88□□□□□ -1.31
FN1-226ENST00000496542 IGFL1Q6UW32 110 aa6.88□□□□□ -1.31
FN1-226ENST00000496542 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
FN1-226ENST00000496542 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
FN1-226ENST00000496542 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
FN1-226ENST00000496542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.86□□□□□ -1.31
FN1-226ENST00000496542 HIST1H4GQ99525 98 aa6.86□□□□□ -1.31
FN1-226ENST00000496542 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
FN1-226ENST00000496542 M0R2T5 61 aa6.85□□□□□ -1.31
FN1-226ENST00000496542 S100A6P06703 90 aa6.85□□□□□ -1.31
FN1-226ENST00000496542 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
FN1-226ENST00000496542 H3BUT2 72 aa6.84□□□□□ -1.31
FN1-226ENST00000496542 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
FN1-226ENST00000496542 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
FN1-226ENST00000496542 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
FN1-226ENST00000496542 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.31
FN1-226ENST00000496542 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
FN1-226ENST00000496542 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
FN1-226ENST00000496542 COX8AP10176 69 aa6.81□□□□□ -1.32
FN1-226ENST00000496542 LST1O00453 97 aa6.8□□□□□ -1.32
FN1-226ENST00000496542 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
FN1-226ENST00000496542 Q75L30 129 aa6.78□□□□□ -1.32
FN1-226ENST00000496542 RAB37Q96AX2 223 aa6.78□□□□□ -1.32
FN1-226ENST00000496542 DLEU1O43261 78 aa6.77□□□□□ -1.33
FN1-226ENST00000496542 CFC1P0CG37 223 aa6.77□□□□□ -1.33
FN1-226ENST00000496542 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
FN1-226ENST00000496542 Q6Q795 121 aa6.77□□□□□ -1.33
FN1-226ENST00000496542 S100A1P23297 94 aa6.76□□□□□ -1.33
FN1-226ENST00000496542 C14orf144Q96I85 54 aa6.76□□□□□ -1.33
FN1-226ENST00000496542 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
FN1-226ENST00000496542 SNCGO76070 127 aa6.75□□□□□ -1.33
FN1-226ENST00000496542 FAM218AQ96MZ4 157 aa6.75□□□□□ -1.33
FN1-226ENST00000496542 Q96NJ1 140 aa6.75□□□□□ -1.33
FN1-226ENST00000496542 PAM16Q9Y3D7 125 aa6.74□□□□□ -1.33
FN1-226ENST00000496542 A0A0B4J2C4 111 aa6.73□□□□□ -1.33
FN1-226ENST00000496542 H0YGX0 51 aa6.73□□□□□ -1.33
FN1-226ENST00000496542 NDUFV3P56181 108 aaKnown RBP6.73□□□□□ -1.33
FN1-226ENST00000496542 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
FN1-226ENST00000496542 SPATA45Q537H7 98 aa6.72□□□□□ -1.33
FN1-226ENST00000496542 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
FN1-226ENST00000496542 A0A087WSZ3 146 aa6.71□□□□□ -1.34
FN1-226ENST00000496542 C2orf91Q6ZV80 131 aa6.71□□□□□ -1.34
FN1-226ENST00000496542 H3BMG7 143 aa6.7□□□□□ -1.34
FN1-226ENST00000496542 FABP2P12104 132 aa6.7□□□□□ -1.34
FN1-226ENST00000496542 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
FN1-226ENST00000496542 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
FN1-226ENST00000496542 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
FN1-226ENST00000496542 A8MUU9 505 aa6.67□□□□□ -1.34
FN1-226ENST00000496542 CEND1Q8N111 149 aa6.67□□□□□ -1.34
FN1-226ENST00000496542 SIGMAR1Q99720 223 aa6.67□□□□□ -1.34
FN1-226ENST00000496542 A0A1B0GX51 115 aa6.66□□□□□ -1.34
FN1-226ENST00000496542 DSCR10P59022 87 aa6.66□□□□□ -1.34
FN1-226ENST00000496542 TRIAP1O43715 76 aa6.65□□□□□ -1.34
FN1-226ENST00000496542 FXYD2P54710 66 aa6.65□□□□□ -1.34
FN1-226ENST00000496542 A0A1B0GV72 72 aa6.64□□□□□ -1.35
FN1-226ENST00000496542 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
FN1-226ENST00000496542 KRTAP4-12Q9BQ66 201 aa6.64□□□□□ -1.35
FN1-226ENST00000496542 TRBV20-1A0A075B6N2 111 aa6.62□□□□□ -1.35
FN1-226ENST00000496542 DNAL4O96015 105 aa6.61□□□□□ -1.35
FN1-226ENST00000496542 IGKV4-1P06312 121 aa6.6□□□□□ -1.35
FN1-226ENST00000496542 ANKRD29Q8N6D5 301 aa6.6□□□□□ -1.35
FN1-226ENST00000496542 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
FN1-226ENST00000496542 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
FN1-226ENST00000496542 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
FN1-226ENST00000496542 K7ERJ3 54 aa6.59□□□□□ -1.35
FN1-226ENST00000496542 PSMB2P49721 201 aa6.59□□□□□ -1.35
FN1-226ENST00000496542 LINC00313P59037 77 aa6.59□□□□□ -1.35
FN1-226ENST00000496542 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
FN1-226ENST00000496542 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
FN1-226ENST00000496542 HSD52Q0P140 79 aa6.57□□□□□ -1.36
FN1-226ENST00000496542 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
FN1-226ENST00000496542 H3BQ85 93 aa6.56□□□□□ -1.36
FN1-226ENST00000496542 DEFB116Q30KQ4 102 aa6.56□□□□□ -1.36
FN1-226ENST00000496542 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
FN1-226ENST00000496542 H3BS24 57 aa6.55□□□□□ -1.36
FN1-226ENST00000496542 CCKP06307 115 aa6.55□□□□□ -1.36
FN1-226ENST00000496542 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
FN1-226ENST00000496542 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
FN1-226ENST00000496542 TMEM256-PLSCR3K7ERE1 68 aa6.54□□□□□ -1.36
FN1-226ENST00000496542 TRACP01848 142 aa6.54□□□□□ -1.36
FN1-226ENST00000496542 COX6CP09669 75 aa6.54□□□□□ -1.36
FN1-226ENST00000496542 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms