RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 LINC00474Q9P2X8 69 aa9.41□□□□□ -0.9
UBXN11-216ENST00000496466 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
UBXN11-216ENST00000496466 PKIGQ9Y2B9 76 aa9.4□□□□□ -0.9
UBXN11-216ENST00000496466 PLECQ15149 4684 aaKnown RBP9.39□□□□□ -0.91
UBXN11-216ENST00000496466 PRLHP81277 87 aa9.39□□□□□ -0.91
UBXN11-216ENST00000496466 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
UBXN11-216ENST00000496466 LINC00476Q8WZB0 136 aa9.39□□□□□ -0.91
UBXN11-216ENST00000496466 OCR1Q9BZK8 76 aa9.38□□□□□ -0.91
UBXN11-216ENST00000496466 C14orf177Q52M58 125 aa9.37□□□□□ -0.91
UBXN11-216ENST00000496466 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
UBXN11-216ENST00000496466 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
UBXN11-216ENST00000496466 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
UBXN11-216ENST00000496466 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
UBXN11-216ENST00000496466 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
UBXN11-216ENST00000496466 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
UBXN11-216ENST00000496466 DSCR10P59022 87 aa9.34□□□□□ -0.91
UBXN11-216ENST00000496466 IGFL1Q6UW32 110 aa9.34□□□□□ -0.91
UBXN11-216ENST00000496466 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
UBXN11-216ENST00000496466 KRTAP11-1Q8IUC1 163 aa9.34□□□□□ -0.91
UBXN11-216ENST00000496466 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
UBXN11-216ENST00000496466 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
UBXN11-216ENST00000496466 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
UBXN11-216ENST00000496466 IGLV8-61A0A075B6I0 122 aa9.32□□□□□ -0.92
UBXN11-216ENST00000496466 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
UBXN11-216ENST00000496466 MEGF8Q7Z7M0 2845 aa9.32□□□□□ -0.92
UBXN11-216ENST00000496466 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
UBXN11-216ENST00000496466 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
UBXN11-216ENST00000496466 V9GYY9 64 aa9.31□□□□□ -0.92
UBXN11-216ENST00000496466 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
UBXN11-216ENST00000496466 K7EQZ3 153 aa9.3□□□□□ -0.92
UBXN11-216ENST00000496466 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
UBXN11-216ENST00000496466 UBE2AP49459 152 aa9.28□□□□□ -0.92
UBXN11-216ENST00000496466 H0Y9J4 135 aa9.28□□□□□ -0.92
UBXN11-216ENST00000496466 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
UBXN11-216ENST00000496466 SPRR1BP22528 89 aa9.26□□□□□ -0.93
UBXN11-216ENST00000496466 SEC61GP60059 68 aa9.26□□□□□ -0.93
UBXN11-216ENST00000496466 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
UBXN11-216ENST00000496466 A0A087WSZ3 146 aa9.25□□□□□ -0.93
UBXN11-216ENST00000496466 PANO1I0J062 215 aa9.25□□□□□ -0.93
UBXN11-216ENST00000496466 DEFB116Q30KQ4 102 aa9.24□□□□□ -0.93
UBXN11-216ENST00000496466 LCE6AA0A183 80 aa9.23□□□□□ -0.93
UBXN11-216ENST00000496466 HCG22E2RYF7 251 aa9.22□□□□□ -0.93
UBXN11-216ENST00000496466 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
UBXN11-216ENST00000496466 A0A087WTM6 91 aa9.2□□□□□ -0.94
UBXN11-216ENST00000496466 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
UBXN11-216ENST00000496466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
UBXN11-216ENST00000496466 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
UBXN11-216ENST00000496466 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
UBXN11-216ENST00000496466 Q6ZR54 194 aa9.17□□□□□ -0.94
UBXN11-216ENST00000496466 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
UBXN11-216ENST00000496466 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
UBXN11-216ENST00000496466 Q1T7F1 81 aa9.16□□□□□ -0.94
UBXN11-216ENST00000496466 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
UBXN11-216ENST00000496466 KMT2AQ03164 3969 aa9.15□□□□□ -0.94
UBXN11-216ENST00000496466 WFDC13Q8IUB5 93 aa9.15□□□□□ -0.95
UBXN11-216ENST00000496466 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
UBXN11-216ENST00000496466 LINC00472Q9H8W2 130 aa9.13□□□□□ -0.95
UBXN11-216ENST00000496466 RTL8CO15255 209 aa9.12□□□□□ -0.95
UBXN11-216ENST00000496466 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
UBXN11-216ENST00000496466 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
UBXN11-216ENST00000496466 FBN3Q75N90 2809 aa9.11□□□□□ -0.95
UBXN11-216ENST00000496466 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
UBXN11-216ENST00000496466 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
UBXN11-216ENST00000496466 A8MWP4 228 aa9.09□□□□□ -0.95
UBXN11-216ENST00000496466 LY6G6CO95867 125 aa9.09□□□□□ -0.95
UBXN11-216ENST00000496466 C1orf134Q5TEV5 83 aa9.08□□□□□ -0.96
UBXN11-216ENST00000496466 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
UBXN11-216ENST00000496466 TGP01266 2768 aa9.08□□□□□ -0.96
UBXN11-216ENST00000496466 DNAH17Q9UFH2 4485 aa9.07□□□□□ -0.96
UBXN11-216ENST00000496466 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
UBXN11-216ENST00000496466 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
UBXN11-216ENST00000496466 IGLV9-49A0A0B4J1Y8 123 aa9.05□□□□□ -0.96
UBXN11-216ENST00000496466 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
UBXN11-216ENST00000496466 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
UBXN11-216ENST00000496466 MP68P56378 58 aa9.02□□□□□ -0.97
UBXN11-216ENST00000496466 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
UBXN11-216ENST00000496466 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
UBXN11-216ENST00000496466 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
UBXN11-216ENST00000496466 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
UBXN11-216ENST00000496466 Q96NJ1 140 aa9□□□□□ -0.97
UBXN11-216ENST00000496466 ZNF706Q9Y5V0 76 aaPredicted RBP8.99□□□□□ -0.97
UBXN11-216ENST00000496466 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
UBXN11-216ENST00000496466 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
UBXN11-216ENST00000496466 H0Y9P7 68 aa8.98□□□□□ -0.97
UBXN11-216ENST00000496466 WWC2-AS2Q96NR7 200 aa8.98□□□□□ -0.97
UBXN11-216ENST00000496466 FRAS1Q86XX4 4008 aa8.97□□□□□ -0.97
UBXN11-216ENST00000496466 NDUFB1O75438 58 aa8.97□□□□□ -0.97
UBXN11-216ENST00000496466 PSPHP1O15172 72 aa8.97□□□□□ -0.97
UBXN11-216ENST00000496466 MOBPQ13875 183 aa8.97□□□□□ -0.97
UBXN11-216ENST00000496466 ZNF861PO60384 105 aa8.96□□□□□ -0.97
UBXN11-216ENST00000496466 H3BPC8 53 aa8.95□□□□□ -0.98
UBXN11-216ENST00000496466 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
UBXN11-216ENST00000496466 PRR4Q16378 134 aa8.94□□□□□ -0.98
UBXN11-216ENST00000496466 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
UBXN11-216ENST00000496466 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
UBXN11-216ENST00000496466 CD164Q04900 197 aa8.93□□□□□ -0.98
UBXN11-216ENST00000496466 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
UBXN11-216ENST00000496466 A8MUN3 132 aa8.9□□□□□ -0.98
UBXN11-216ENST00000496466 C8orf17Q9NRJ1 99 aa8.89□□□□□ -0.99
UBXN11-216ENST00000496466 Q5VV11 94 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms