RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
RNF220-217ENST00000496262 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
RNF220-217ENST00000496262 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
RNF220-217ENST00000496262 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
RNF220-217ENST00000496262 UBL5Q9BZL1 73 aa6.77□□□□□ -1.33
RNF220-217ENST00000496262 LRP2P98164 4655 aa6.77□□□□□ -1.33
RNF220-217ENST00000496262 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 TRBV10-3A0A0K0K1G6 114 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 H3BQ85 93 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 LINC00575Q6W349 94 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 Q6ZRP5 223 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 CAMK2N2Q96S95 79 aa6.76□□□□□ -1.33
RNF220-217ENST00000496262 LOC110117498A0A087WWA1 95 aa6.75□□□□□ -1.33
RNF220-217ENST00000496262 LOC107984640A0A0U1RRK4 108 aa6.75□□□□□ -1.33
RNF220-217ENST00000496262 GHRHP01286 108 aa6.75□□□□□ -1.33
RNF220-217ENST00000496262 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
RNF220-217ENST00000496262 C6orf99Q4VX62 202 aa6.75□□□□□ -1.33
RNF220-217ENST00000496262 NDUFC2-KCTD14E9PQ53 114 aa6.73□□□□□ -1.33
RNF220-217ENST00000496262 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
RNF220-217ENST00000496262 Q6ZQT0 140 aa6.73□□□□□ -1.33
RNF220-217ENST00000496262 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
RNF220-217ENST00000496262 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
RNF220-217ENST00000496262 A0A1W2PNN7 141 aa6.72□□□□□ -1.33
RNF220-217ENST00000496262 BCE1O60756 84 aa6.72□□□□□ -1.33
RNF220-217ENST00000496262 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
RNF220-217ENST00000496262 Q8NDZ9 215 aa6.72□□□□□ -1.33
RNF220-217ENST00000496262 PDE6GP18545 87 aa6.71□□□□□ -1.34
RNF220-217ENST00000496262 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
RNF220-217ENST00000496262 FAM19A1Q7Z5A9 133 aa6.71□□□□□ -1.34
RNF220-217ENST00000496262 LAMTOR3Q9UHA4 124 aa6.71□□□□□ -1.34
RNF220-217ENST00000496262 IGLV6-57P01721 117 aa6.7□□□□□ -1.34
RNF220-217ENST00000496262 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
RNF220-217ENST00000496262 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
RNF220-217ENST00000496262 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
RNF220-217ENST00000496262 PHF5AQ7RTV0 110 aaKnown RBP6.7□□□□□ -1.34
RNF220-217ENST00000496262 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
RNF220-217ENST00000496262 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
RNF220-217ENST00000496262 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
RNF220-217ENST00000496262 DIRC1Q969H9 104 aa6.69□□□□□ -1.34
RNF220-217ENST00000496262 TRAV7A0A075B6U4 112 aa6.68□□□□□ -1.34
RNF220-217ENST00000496262 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
RNF220-217ENST00000496262 FAM168BA1KXE4 195 aa6.67□□□□□ -1.34
RNF220-217ENST00000496262 COX7BP24311 80 aa6.67□□□□□ -1.34
RNF220-217ENST00000496262 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
RNF220-217ENST00000496262 Q6ZQY7 126 aa6.67□□□□□ -1.34
RNF220-217ENST00000496262 Q6ZVQ6 151 aa6.67□□□□□ -1.34
RNF220-217ENST00000496262 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
RNF220-217ENST00000496262 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
RNF220-217ENST00000496262 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
RNF220-217ENST00000496262 CXCL6P80162 114 aa6.66□□□□□ -1.34
RNF220-217ENST00000496262 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
RNF220-217ENST00000496262 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
RNF220-217ENST00000496262 PRR26Q8N8Z3 221 aa6.64□□□□□ -1.35
RNF220-217ENST00000496262 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
RNF220-217ENST00000496262 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
RNF220-217ENST00000496262 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
RNF220-217ENST00000496262 KRTAP11-1Q8IUC1 163 aa6.63□□□□□ -1.35
RNF220-217ENST00000496262 ELOF1P60002 83 aaKnown RBP6.62□□□□□ -1.35
RNF220-217ENST00000496262 TRBV7-4A0A0J9YYF1 115 aa6.61□□□□□ -1.35
RNF220-217ENST00000496262 F8WDY8 70 aa6.61□□□□□ -1.35
RNF220-217ENST00000496262 M0R378 163 aa6.61□□□□□ -1.35
RNF220-217ENST00000496262 UBE2BP63146 152 aa6.61□□□□□ -1.35
RNF220-217ENST00000496262 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
RNF220-217ENST00000496262 H0Y9J4 135 aa6.6□□□□□ -1.35
RNF220-217ENST00000496262 TLX1NBP0CAT3 122 aa6.6□□□□□ -1.35
RNF220-217ENST00000496262 VPREB1P12018 145 aa6.6□□□□□ -1.35
RNF220-217ENST00000496262 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
RNF220-217ENST00000496262 LPAP08519 4548 aa6.6□□□□□ -1.35
RNF220-217ENST00000496262 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
RNF220-217ENST00000496262 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
RNF220-217ENST00000496262 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
RNF220-217ENST00000496262 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
RNF220-217ENST00000496262 H7BZZ5 65 aa6.57□□□□□ -1.36
RNF220-217ENST00000496262 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
RNF220-217ENST00000496262 Q5XG85 94 aa6.57□□□□□ -1.36
RNF220-217ENST00000496262 NDUFC1O43677 76 aa6.56□□□□□ -1.36
RNF220-217ENST00000496262 KRTAP1-4P0C5Y4 121 aa6.55□□□□□ -1.36
RNF220-217ENST00000496262 NREPQ16612 68 aa6.55□□□□□ -1.36
RNF220-217ENST00000496262 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
RNF220-217ENST00000496262 F8WEM9 126 aa6.54□□□□□ -1.36
RNF220-217ENST00000496262 SNURFQ9Y675 71 aa6.54□□□□□ -1.36
RNF220-217ENST00000496262 ERC2-IT1O76042 136 aa6.53□□□□□ -1.36
RNF220-217ENST00000496262 PRR4Q16378 134 aa6.53□□□□□ -1.36
RNF220-217ENST00000496262 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
RNF220-217ENST00000496262 HRCT1Q6UXD1 115 aa6.53□□□□□ -1.36
RNF220-217ENST00000496262 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
RNF220-217ENST00000496262 BPY2O14599 106 aa6.51□□□□□ -1.37
RNF220-217ENST00000496262 NKAPP1Q8N9T2 125 aa6.51□□□□□ -1.37
RNF220-217ENST00000496262 ZNF861PO60384 105 aa6.5□□□□□ -1.37
RNF220-217ENST00000496262 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
RNF220-217ENST00000496262 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
RNF220-217ENST00000496262 KCNQ1DNQ9H478 68 aa6.48□□□□□ -1.37
RNF220-217ENST00000496262 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
RNF220-217ENST00000496262 PRYO14603 147 aa6.47□□□□□ -1.37
RNF220-217ENST00000496262 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
RNF220-217ENST00000496262 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
RNF220-217ENST00000496262 A0A1B0GW54 56 aa6.46□□□□□ -1.38
RNF220-217ENST00000496262 Q8N9L7 120 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms