RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 PSENENQ9NZ42 101 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 HILPDAQ9Y5L2 63 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 LENEPQ9Y5L5 61 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 DNAH1Q9P2D7 4330 aa1.85□□□□□ -2.11
CCDC39-207ENST00000495817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.11
CCDC39-207ENST00000495817 MYMXA0A1B0GTQ4 84 aa1.84□□□□□ -2.11
CCDC39-207ENST00000495817 LOC101927531A0A1B0GV80 90 aa1.84□□□□□ -2.11
CCDC39-207ENST00000495817 ZNF815PA8K554 130 aa1.84□□□□□ -2.11
CCDC39-207ENST00000495817 HIGD1CA8MV81 97 aa1.84□□□□□ -2.11
CCDC39-207ENST00000495817 PPP1R17O96001 155 aa1.84□□□□□ -2.11
CCDC39-207ENST00000495817 ELOF1P60002 83 aaKnown RBP1.84□□□□□ -2.11
CCDC39-207ENST00000495817 SSBP1Q04837 148 aaKnown RBP1.84□□□□□ -2.11
CCDC39-207ENST00000495817 ROS1P08922 2347 aa1.84□□□□□ -2.12
CCDC39-207ENST00000495817 IGLV3-32A0A0A0MS00 114 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 LYNX1G3V0Z9 82 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 JMJD7-PLA2G4BH0Y9G9 81 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 IGHV3-30P01768 117 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 IGHV3-30-5P0DP03 117 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 CCL3L1P16619 93 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 PDE6GP18545 87 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 PLGLAQ15195 96 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 DEFB121Q5J5C9 76 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 XAF1Q6GPH4 301 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 PRR15LQ9BU68 103 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 ARL2-SNX15V9GYD0 113 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 ARFGEF3Q5TH69 2177 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 NOTCH1P46531 2555 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 HERC2O95714 4834 aa1.83□□□□□ -2.12
CCDC39-207ENST00000495817 ARMS2P0C7Q2 107 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 COX8AP10176 69 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 GCHFRP30047 84 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 RPL37AP61513 92 aaKnown RBP1.82□□□□□ -2.12
CCDC39-207ENST00000495817 SPAG11BQ08648 103 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 SPAG11AQ6PDA7 123 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 RPS27LQ71UM5 84 aaKnown RBP1.82□□□□□ -2.12
CCDC39-207ENST00000495817 C6orf201Q7Z4U5 140 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 WFDC10AQ9H1F0 79 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 V9GYH0 126 aa1.82□□□□□ -2.12
CCDC39-207ENST00000495817 HUWE1Q7Z6Z7 4374 aaKnown RBP1.82□□□□□ -2.12
CCDC39-207ENST00000495817 COL7A1Q02388 2944 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 LYSTQ99698 3801 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 NBDYA0A0U1RRE5 68 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 SAA2P0DJI9 122 aaPredicted RBP1.81□□□□□ -2.12
CCDC39-207ENST00000495817 CCL18P55774 89 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 Q6JHZ5 121 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 COX7B2Q8TF08 81 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 KLK9Q9UKQ9 250 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 STARD9Q9P2P6 4700 aa1.81□□□□□ -2.12
CCDC39-207ENST00000495817 DNAH7Q8WXX0 4024 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 A0A087WTM6 91 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 A0A087WVE0 104 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 A0A1B0GWA3 101 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 CEBPZOSA8MTT3 80 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 FXYD1O00168 92 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 LEPROTL1O95214 131 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 DNAL4O96015 105 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 C3orf79P0CE67 100 aa1.8□□□□□ -2.12
CCDC39-207ENST00000495817 CSMD3Q7Z407 3707 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 LOC110117498A0A087WWA1 95 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 M0R3E3 92 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 PIN1P1O15428 100 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 FAM74A4Q5TZK3 123 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 CADP27708 2225 aa1.79□□□□□ -2.12
CCDC39-207ENST00000495817 ALMS1Q8TCU4 4167 aa1.78□□□□□ -2.12
CCDC39-207ENST00000495817 FXYD3Q14802 87 aa1.78□□□□□ -2.12
CCDC39-207ENST00000495817 DEFB108BQ8NET1 73 aa1.78□□□□□ -2.12
CCDC39-207ENST00000495817 PPP1R1CQ8WVI7 109 aa1.78□□□□□ -2.12
CCDC39-207ENST00000495817 TENM3Q9P273 2699 aa1.78□□□□□ -2.12
CCDC39-207ENST00000495817 PLCE1Q9P212 2302 aa1.78□□□□□ -2.13
CCDC39-207ENST00000495817 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 RYR1P21817 5038 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 KIAA1109Q2LD37 5005 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 TENM2Q9NT68 2774 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 WNK1Q9H4A3 2382 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 F8VRH5 84 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 H3BVH4 76 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 Q86TA4 180 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 C5orf56Q8N8D9 126 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 AMELXQ99217 191 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
CCDC39-207ENST00000495817 PLECQ15149 4684 aaKnown RBP1.76□□□□□ -2.13
CCDC39-207ENST00000495817 HECTD4Q9Y4D8 3996 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-207ENST00000495817 FXYD6-FXYD2A0A087WZ82 144 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 TRBV7-4A0A0J9YYF1 115 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 D6R8Y8 96 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 K7EIL1 84 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 M0R2N4 97 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 MRPL33O75394 65 aaKnown RBP1.76□□□□□ -2.13
CCDC39-207ENST00000495817 S100A3P33764 101 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 PRB3Q04118 309 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-207ENST00000495817 DEFB112Q30KQ8 113 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 MUSTN1Q8IVN3 82 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 LINC01558Q9Y6Z2 57 aa1.76□□□□□ -2.13
CCDC39-207ENST00000495817 M0R135 149 aa1.75□□□□□ -2.13
CCDC39-207ENST00000495817 IFI27P40305 119 aaPredicted RBP1.75□□□□□ -2.13
CCDC39-207ENST00000495817 ATP5EP2Q5VTU8 51 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms