RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
COL1A1-209ENST00000495677 LITAFQ99732 161 aa6.87□□□□□ -1.31
COL1A1-209ENST00000495677 TIMM17BO60830 172 aa6.86□□□□□ -1.31
COL1A1-209ENST00000495677 MT2AP02795 61 aa6.86□□□□□ -1.31
COL1A1-209ENST00000495677 COX7BP24311 80 aa6.86□□□□□ -1.31
COL1A1-209ENST00000495677 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
COL1A1-209ENST00000495677 SPANXCQ9NY87 97 aa6.86□□□□□ -1.31
COL1A1-209ENST00000495677 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
COL1A1-209ENST00000495677 IGLV5-48A0A075B6I7 105 aa6.85□□□□□ -1.31
COL1A1-209ENST00000495677 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
COL1A1-209ENST00000495677 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
COL1A1-209ENST00000495677 SPANXDQ9BXN6 97 aa6.84□□□□□ -1.31
COL1A1-209ENST00000495677 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
COL1A1-209ENST00000495677 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
COL1A1-209ENST00000495677 C6orf99Q4VX62 202 aa6.83□□□□□ -1.32
COL1A1-209ENST00000495677 PAM16Q9Y3D7 125 aa6.83□□□□□ -1.32
COL1A1-209ENST00000495677 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
COL1A1-209ENST00000495677 LINC00518Q8N0U6 118 aa6.81□□□□□ -1.32
COL1A1-209ENST00000495677 VAMP8Q9BV40 100 aa6.81□□□□□ -1.32
COL1A1-209ENST00000495677 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
COL1A1-209ENST00000495677 MT1FP04733 61 aa6.8□□□□□ -1.32
COL1A1-209ENST00000495677 SPATA45Q537H7 98 aa6.8□□□□□ -1.32
COL1A1-209ENST00000495677 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
COL1A1-209ENST00000495677 COPS9Q8WXC6 57 aa6.8□□□□□ -1.32
COL1A1-209ENST00000495677 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
COL1A1-209ENST00000495677 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
COL1A1-209ENST00000495677 IFITM1P13164 125 aa6.78□□□□□ -1.32
COL1A1-209ENST00000495677 C14orf144Q96I85 54 aa6.78□□□□□ -1.32
COL1A1-209ENST00000495677 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
COL1A1-209ENST00000495677 A6NDN8 102 aa6.77□□□□□ -1.33
COL1A1-209ENST00000495677 COX8AP10176 69 aa6.77□□□□□ -1.33
COL1A1-209ENST00000495677 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
COL1A1-209ENST00000495677 C12orf57Q99622 126 aa6.77□□□□□ -1.33
COL1A1-209ENST00000495677 Q6ZVH6 145 aa6.76□□□□□ -1.33
COL1A1-209ENST00000495677 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
COL1A1-209ENST00000495677 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
COL1A1-209ENST00000495677 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
COL1A1-209ENST00000495677 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
COL1A1-209ENST00000495677 A4D1N5 150 aa6.74□□□□□ -1.33
COL1A1-209ENST00000495677 PYY3Q5JQD4 70 aa6.73□□□□□ -1.33
COL1A1-209ENST00000495677 TRBV7-7A0A0K0K1E9 115 aa6.72□□□□□ -1.33
COL1A1-209ENST00000495677 A8MUU9 505 aa6.72□□□□□ -1.33
COL1A1-209ENST00000495677 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
COL1A1-209ENST00000495677 Q6JHZ5 121 aa6.71□□□□□ -1.34
COL1A1-209ENST00000495677 Q96NJ1 140 aa6.71□□□□□ -1.34
COL1A1-209ENST00000495677 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.34
COL1A1-209ENST00000495677 DLEU1O43261 78 aa6.69□□□□□ -1.34
COL1A1-209ENST00000495677 F8WEM9 126 aa6.68□□□□□ -1.34
COL1A1-209ENST00000495677 IGFL1Q6UW32 110 aa6.68□□□□□ -1.34
COL1A1-209ENST00000495677 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
COL1A1-209ENST00000495677 SMIM11BQ8TCY0 68 aa6.68□□□□□ -1.34
COL1A1-209ENST00000495677 CLEC2BQ92478 149 aa6.68□□□□□ -1.34
COL1A1-209ENST00000495677 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
COL1A1-209ENST00000495677 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
COL1A1-209ENST00000495677 HIGD1BQ9P298 99 aa6.66□□□□□ -1.34
COL1A1-209ENST00000495677 LST1O00453 97 aa6.65□□□□□ -1.34
COL1A1-209ENST00000495677 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
COL1A1-209ENST00000495677 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
COL1A1-209ENST00000495677 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
COL1A1-209ENST00000495677 CEND1Q8N111 149 aa6.63□□□□□ -1.35
COL1A1-209ENST00000495677 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
COL1A1-209ENST00000495677 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 A6NJY4 79 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 FXYD2P54710 66 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 VAMP3Q15836 100 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
COL1A1-209ENST00000495677 HSD52Q0P140 79 aa6.6□□□□□ -1.35
COL1A1-209ENST00000495677 A0A0B4J2C4 111 aa6.59□□□□□ -1.35
COL1A1-209ENST00000495677 K7ERJ3 54 aa6.59□□□□□ -1.35
COL1A1-209ENST00000495677 HRES1P13985 223 aa6.59□□□□□ -1.35
COL1A1-209ENST00000495677 LINC00575Q6W349 94 aa6.59□□□□□ -1.35
COL1A1-209ENST00000495677 SMIM6P0DI80 62 aa6.57□□□□□ -1.36
COL1A1-209ENST00000495677 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
COL1A1-209ENST00000495677 Q6ZQY7 126 aa6.57□□□□□ -1.36
COL1A1-209ENST00000495677 SS18L2Q9UHA2 77 aa6.57□□□□□ -1.36
COL1A1-209ENST00000495677 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
COL1A1-209ENST00000495677 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
COL1A1-209ENST00000495677 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
COL1A1-209ENST00000495677 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
COL1A1-209ENST00000495677 PSMB2P49721 201 aa6.53□□□□□ -1.36
COL1A1-209ENST00000495677 LOC105371267A0A1B0GV96 52 aa6.52□□□□□ -1.37
COL1A1-209ENST00000495677 TRIAP1O43715 76 aa6.51□□□□□ -1.37
COL1A1-209ENST00000495677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.51□□□□□ -1.37
COL1A1-209ENST00000495677 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
COL1A1-209ENST00000495677 DSCR10P59022 87 aa6.5□□□□□ -1.37
COL1A1-209ENST00000495677 TEN1Q86WV5 123 aa6.5□□□□□ -1.37
COL1A1-209ENST00000495677 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
COL1A1-209ENST00000495677 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
COL1A1-209ENST00000495677 A8MWP4 228 aa6.48□□□□□ -1.37
COL1A1-209ENST00000495677 TSTD3H0UI37 97 aa6.48□□□□□ -1.37
COL1A1-209ENST00000495677 SNCGO76070 127 aa6.48□□□□□ -1.37
COL1A1-209ENST00000495677 LINC00313P59037 77 aa6.48□□□□□ -1.37
COL1A1-209ENST00000495677 H0YGX0 51 aa6.47□□□□□ -1.37
COL1A1-209ENST00000495677 M0R143 59 aa6.47□□□□□ -1.37
COL1A1-209ENST00000495677 H3BUT2 72 aa6.46□□□□□ -1.38
COL1A1-209ENST00000495677 BATFQ16520 125 aa6.46□□□□□ -1.38
COL1A1-209ENST00000495677 A0A1B0GV72 72 aa6.45□□□□□ -1.38
COL1A1-209ENST00000495677 DNAL4O96015 105 aa6.45□□□□□ -1.38
COL1A1-209ENST00000495677 A0A087WSZ3 146 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms