RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SFTA2Q6UW10 78 aa3.77□□□□□ -1.81
GARNL3-219ENST00000495172 SOSTDC1Q6X4U4 206 aa3.77□□□□□ -1.81
GARNL3-219ENST00000495172 COMMD7Q86VX2 200 aa3.77□□□□□ -1.81
GARNL3-219ENST00000495172 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
GARNL3-219ENST00000495172 K7EMI3 77 aa3.76□□□□□ -1.81
GARNL3-219ENST00000495172 LST1O00453 97 aa3.76□□□□□ -1.81
GARNL3-219ENST00000495172 HINT1P49773 126 aaPredicted RBP3.76□□□□□ -1.81
GARNL3-219ENST00000495172 SPINK7P58062 85 aa3.76□□□□□ -1.81
GARNL3-219ENST00000495172 FAM218AQ96MZ4 157 aa3.76□□□□□ -1.81
GARNL3-219ENST00000495172 MAP1LC3CQ9BXW4 147 aa3.76□□□□□ -1.81
GARNL3-219ENST00000495172 UQCC3Q6UW78 93 aa3.75□□□□□ -1.81
GARNL3-219ENST00000495172 IGLV5-48A0A075B6I7 105 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 A0A1B0GWB2 263 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 TMEM218A2RU14 115 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 COX7BP24311 80 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 ELOF1P60002 83 aaKnown RBP3.74□□□□□ -1.81
GARNL3-219ENST00000495172 FA2HQ7L5A8 372 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 SLC7A5P1Q8MH63 180 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 RPS10P5Q9NQ39 176 aa3.74□□□□□ -1.81
GARNL3-219ENST00000495172 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
GARNL3-219ENST00000495172 TMEM223A0PJW6 202 aa3.73□□□□□ -1.81
GARNL3-219ENST00000495172 G0S2P27469 103 aa3.73□□□□□ -1.81
GARNL3-219ENST00000495172 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
GARNL3-219ENST00000495172 PCP4P48539 62 aa3.72□□□□□ -1.81
GARNL3-219ENST00000495172 TSPEAR-AS2P59090 65 aa3.72□□□□□ -1.81
GARNL3-219ENST00000495172 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
GARNL3-219ENST00000495172 OR13C6PQ8NH95 151 aa3.72□□□□□ -1.81
GARNL3-219ENST00000495172 SEC11CQ9BY50 192 aa3.72□□□□□ -1.81
GARNL3-219ENST00000495172 COLCA2A8K830 154 aa3.7□□□□□ -1.82
GARNL3-219ENST00000495172 MT1XP80297 61 aa3.7□□□□□ -1.82
GARNL3-219ENST00000495172 BAGE3Q86Y29 109 aa3.7□□□□□ -1.82
GARNL3-219ENST00000495172 A0A096LNJ9 63 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 NDUFC2O95298 119 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 APOC3P02656 99 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 HERV-K104P63124 156 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 ATP5L2Q7Z4Y8 100 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 MIEN1Q9BRT3 115 aa3.69□□□□□ -1.82
GARNL3-219ENST00000495172 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
GARNL3-219ENST00000495172 MT-ND4LP03901 98 aa3.68□□□□□ -1.82
GARNL3-219ENST00000495172 LINC00313P59037 77 aa3.68□□□□□ -1.82
GARNL3-219ENST00000495172 SVBPQ8N300 66 aa3.68□□□□□ -1.82
GARNL3-219ENST00000495172 CLEC2BQ92478 149 aa3.68□□□□□ -1.82
GARNL3-219ENST00000495172 URB1-AS1Q96HZ7 61 aa3.68□□□□□ -1.82
GARNL3-219ENST00000495172 SNAPINO95295 136 aa3.67□□□□□ -1.82
GARNL3-219ENST00000495172 HBDP02042 147 aa3.67□□□□□ -1.82
GARNL3-219ENST00000495172 PMCHL1Q16048 86 aa3.67□□□□□ -1.82
GARNL3-219ENST00000495172 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
GARNL3-219ENST00000495172 LINC00518Q8N0U6 118 aa3.67□□□□□ -1.82
GARNL3-219ENST00000495172 LINC01546A6NGU7 62 aa3.66□□□□□ -1.82
GARNL3-219ENST00000495172 RHEBQ15382 184 aa3.66□□□□□ -1.82
GARNL3-219ENST00000495172 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
GARNL3-219ENST00000495172 MYMXA0A1B0GTQ4 84 aa3.65□□□□□ -1.83
GARNL3-219ENST00000495172 F8WEM9 126 aa3.65□□□□□ -1.83
GARNL3-219ENST00000495172 SIGMAR1Q99720 223 aa3.65□□□□□ -1.83
GARNL3-219ENST00000495172 S100PP25815 95 aa3.64□□□□□ -1.83
GARNL3-219ENST00000495172 LINC00587B1AMM8 73 aa3.63□□□□□ -1.83
GARNL3-219ENST00000495172 S100A1P23297 94 aa3.63□□□□□ -1.83
GARNL3-219ENST00000495172 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
GARNL3-219ENST00000495172 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
GARNL3-219ENST00000495172 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
GARNL3-219ENST00000495172 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
GARNL3-219ENST00000495172 H3BUT2 72 aa3.62□□□□□ -1.83
GARNL3-219ENST00000495172 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
GARNL3-219ENST00000495172 SMCO4Q9NRQ5 59 aa3.62□□□□□ -1.83
GARNL3-219ENST00000495172 Q6JHZ5 121 aa3.61□□□□□ -1.83
GARNL3-219ENST00000495172 YPEL4Q96NS1 127 aa3.61□□□□□ -1.83
GARNL3-219ENST00000495172 A0A0J9YXY3 114 aa3.59□□□□□ -1.83
GARNL3-219ENST00000495172 LINC01549A6NIU2 74 aa3.59□□□□□ -1.83
GARNL3-219ENST00000495172 COX19Q49B96 90 aa3.59□□□□□ -1.83
GARNL3-219ENST00000495172 OCIAD2Q56VL3 154 aa3.59□□□□□ -1.83
GARNL3-219ENST00000495172 FABP9Q0Z7S8 132 aa3.58□□□□□ -1.84
GARNL3-219ENST00000495172 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
GARNL3-219ENST00000495172 TRAPPC1Q9Y5R8 145 aa3.58□□□□□ -1.84
GARNL3-219ENST00000495172 A0A087WSZ3 146 aa3.57□□□□□ -1.84
GARNL3-219ENST00000495172 DEFB116Q30KQ4 102 aa3.57□□□□□ -1.84
GARNL3-219ENST00000495172 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
GARNL3-219ENST00000495172 TRGC2P03986 189 aa3.56□□□□□ -1.84
GARNL3-219ENST00000495172 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
GARNL3-219ENST00000495172 SPANXDQ9BXN6 97 aa3.56□□□□□ -1.84
GARNL3-219ENST00000495172 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
GARNL3-219ENST00000495172 IGHV6-1A0A0B4J1U7 121 aa3.55□□□□□ -1.84
GARNL3-219ENST00000495172 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
GARNL3-219ENST00000495172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
GARNL3-219ENST00000495172 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
GARNL3-219ENST00000495172 IGKV4-1P06312 121 aa3.54□□□□□ -1.84
GARNL3-219ENST00000495172 LINC00308Q8TCZ7 52 aa3.54□□□□□ -1.84
GARNL3-219ENST00000495172 NHP2Q9NX24 153 aaKnown RBP3.54□□□□□ -1.84
GARNL3-219ENST00000495172 SPANXCQ9NY87 97 aa3.54□□□□□ -1.84
GARNL3-219ENST00000495172 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
GARNL3-219ENST00000495172 J3QQQ9 107 aa3.53□□□□□ -1.84
GARNL3-219ENST00000495172 LEPROTO15243 131 aa3.53□□□□□ -1.84
GARNL3-219ENST00000495172 C18orf32Q8TCD1 76 aa3.53□□□□□ -1.84
GARNL3-219ENST00000495172 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
GARNL3-219ENST00000495172 TRBV7-6A0A0J9YX20 115 aa3.52□□□□□ -1.85
GARNL3-219ENST00000495172 Q6ZQY7 126 aa3.52□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BKO60814 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BJP06899 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 LINC00614P0C842 121 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BOP23527 126 aa3.51□□□□□ -1.85
GARNL3-219ENST00000495172 HIST1H2BBP33778 126 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms