RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 UBL5Q9BZL1 73 aa10.19□□□□□ -0.78
CBX4-204ENST00000495122 FAT1Q14517 4588 aa10.18□□□□□ -0.78
CBX4-204ENST00000495122 Q8N377 158 aa10.18□□□□□ -0.78
CBX4-204ENST00000495122 DNAH8Q96JB1 4490 aa10.18□□□□□ -0.78
CBX4-204ENST00000495122 HERC1Q15751 4861 aa10.16□□□□□ -0.78
CBX4-204ENST00000495122 A0A1B0GV72 72 aa10.16□□□□□ -0.78
CBX4-204ENST00000495122 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CBX4-204ENST00000495122 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
CBX4-204ENST00000495122 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
CBX4-204ENST00000495122 IGLV5-52A0A0A0MRZ9 124 aa10.12□□□□□ -0.79
CBX4-204ENST00000495122 BCE1O60756 84 aa10.11□□□□□ -0.79
CBX4-204ENST00000495122 Q5VSD8 79 aa10.11□□□□□ -0.79
CBX4-204ENST00000495122 DEFB105AQ8NG35 78 aa10.11□□□□□ -0.79
CBX4-204ENST00000495122 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
CBX4-204ENST00000495122 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
CBX4-204ENST00000495122 F8WEM9 126 aa10.09□□□□□ -0.79
CBX4-204ENST00000495122 ERC2-IT1O76042 136 aa10.09□□□□□ -0.79
CBX4-204ENST00000495122 SPRR1BP22528 89 aa10.09□□□□□ -0.79
CBX4-204ENST00000495122 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
CBX4-204ENST00000495122 UBE2AP49459 152 aa10.08□□□□□ -0.8
CBX4-204ENST00000495122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
CBX4-204ENST00000495122 IGLV8-61A0A075B6I0 122 aa10.07□□□□□ -0.8
CBX4-204ENST00000495122 HAMPP81172 84 aa10.07□□□□□ -0.8
CBX4-204ENST00000495122 PRLHP81277 87 aa10.07□□□□□ -0.8
CBX4-204ENST00000495122 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
CBX4-204ENST00000495122 PANO1I0J062 215 aa10.06□□□□□ -0.8
CBX4-204ENST00000495122 CXCL6P80162 114 aa10.06□□□□□ -0.8
CBX4-204ENST00000495122 MYCBP2O75592 4640 aa10.05□□□□□ -0.8
CBX4-204ENST00000495122 SMR3BP02814 79 aaPredicted RBP10.05□□□□□ -0.8
CBX4-204ENST00000495122 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
CBX4-204ENST00000495122 Q6ZVQ6 151 aa10.05□□□□□ -0.8
CBX4-204ENST00000495122 KRTAP13-1Q8IUC0 172 aa10.05□□□□□ -0.8
CBX4-204ENST00000495122 HIGD2AQ9BW72 106 aa10.05□□□□□ -0.8
CBX4-204ENST00000495122 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
CBX4-204ENST00000495122 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
CBX4-204ENST00000495122 SMIM29Q86T20 159 aa10.04□□□□□ -0.8
CBX4-204ENST00000495122 ANAPC13Q9BS18 74 aa10.04□□□□□ -0.8
CBX4-204ENST00000495122 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
CBX4-204ENST00000495122 Q8NBF4 154 aa10.03□□□□□ -0.8
CBX4-204ENST00000495122 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
CBX4-204ENST00000495122 SPRR4Q96PI1 79 aa10.02□□□□□ -0.81
CBX4-204ENST00000495122 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
CBX4-204ENST00000495122 FAM236AA0A1B0GUQ0 79 aa10.01□□□□□ -0.81
CBX4-204ENST00000495122 FAM236BA0A1B0GV22 79 aa10.01□□□□□ -0.81
CBX4-204ENST00000495122 HIST1H4AP62805 103 aaKnown RBP10.01□□□□□ -0.81
CBX4-204ENST00000495122 Q6ZSA8 131 aa10.01□□□□□ -0.81
CBX4-204ENST00000495122 FAM229AH3BQW9 127 aa10□□□□□ -0.81
CBX4-204ENST00000495122 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
CBX4-204ENST00000495122 ATOX1O00244 68 aa9.98□□□□□ -0.81
CBX4-204ENST00000495122 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
CBX4-204ENST00000495122 NREPQ16612 68 aa9.97□□□□□ -0.81
CBX4-204ENST00000495122 A0A1W2PNM2 257 aa9.96□□□□□ -0.82
CBX4-204ENST00000495122 CRYGAP11844 174 aa9.96□□□□□ -0.82
CBX4-204ENST00000495122 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
CBX4-204ENST00000495122 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.82
CBX4-204ENST00000495122 LINC00483Q53H64 154 aa9.93□□□□□ -0.82
CBX4-204ENST00000495122 PSORS1C2Q9UIG4 136 aa9.93□□□□□ -0.82
CBX4-204ENST00000495122 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
CBX4-204ENST00000495122 ZNF861PO60384 105 aa9.91□□□□□ -0.82
CBX4-204ENST00000495122 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
CBX4-204ENST00000495122 PLA2G1BP04054 148 aaKnown RBP9.9□□□□□ -0.82
CBX4-204ENST00000495122 BPY2O14599 106 aa9.88□□□□□ -0.83
CBX4-204ENST00000495122 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
CBX4-204ENST00000495122 A0A087WVE0 104 aa9.86□□□□□ -0.83
CBX4-204ENST00000495122 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
CBX4-204ENST00000495122 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
CBX4-204ENST00000495122 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
CBX4-204ENST00000495122 FAT3Q8TDW7 4589 aa9.84□□□□□ -0.83
CBX4-204ENST00000495122 UQCRQO14949 82 aa9.84□□□□□ -0.83
CBX4-204ENST00000495122 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
CBX4-204ENST00000495122 COX7CP15954 63 aa9.82□□□□□ -0.84
CBX4-204ENST00000495122 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
CBX4-204ENST00000495122 KRTAP29-1A8MX34 341 aaPredicted RBP9.81□□□□□ -0.84
CBX4-204ENST00000495122 J3QL48 77 aa9.81□□□□□ -0.84
CBX4-204ENST00000495122 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
CBX4-204ENST00000495122 A0A087WSZ3 146 aa9.77□□□□□ -0.85
CBX4-204ENST00000495122 CCDC179H3BU77 68 aa9.76□□□□□ -0.85
CBX4-204ENST00000495122 TRAV7A0A075B6U4 112 aa9.75□□□□□ -0.85
CBX4-204ENST00000495122 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
CBX4-204ENST00000495122 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
CBX4-204ENST00000495122 J3KT08 172 aa9.74□□□□□ -0.85
CBX4-204ENST00000495122 DSCR10P59022 87 aa9.72□□□□□ -0.85
CBX4-204ENST00000495122 IGLV9-49A0A0B4J1Y8 123 aa9.71□□□□□ -0.86
CBX4-204ENST00000495122 OXTP01178 125 aa9.71□□□□□ -0.86
CBX4-204ENST00000495122 CD164Q04900 197 aa9.7□□□□□ -0.86
CBX4-204ENST00000495122 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
CBX4-204ENST00000495122 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
CBX4-204ENST00000495122 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
CBX4-204ENST00000495122 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
CBX4-204ENST00000495122 MOBPQ13875 183 aa9.68□□□□□ -0.86
CBX4-204ENST00000495122 Q8N9L7 120 aa9.67□□□□□ -0.86
CBX4-204ENST00000495122 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
CBX4-204ENST00000495122 A8MWP4 228 aa9.64□□□□□ -0.87
CBX4-204ENST00000495122 K7EQZ3 153 aa9.64□□□□□ -0.87
CBX4-204ENST00000495122 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
CBX4-204ENST00000495122 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
CBX4-204ENST00000495122 NDUFB1O75438 58 aa9.61□□□□□ -0.87
CBX4-204ENST00000495122 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
CBX4-204ENST00000495122 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
CBX4-204ENST00000495122 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms