RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 C9orf116Q5BN46 136 aaPredicted RBP1.78□□□□□ -2.12
MDC1-208ENST00000494654 KPRPQ5T749 579 aaPredicted RBP1.78□□□□□ -2.12
MDC1-208ENST00000494654 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 COA5Q86WW8 74 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 CHCHD10Q8WYQ3 142 aaPredicted RBP1.78□□□□□ -2.12
MDC1-208ENST00000494654 MXRA5Q9NR99 2828 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 TGP01266 2768 aa1.78□□□□□ -2.12
MDC1-208ENST00000494654 ROS1P08922 2347 aa1.78□□□□□ -2.13
MDC1-208ENST00000494654 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.13
MDC1-208ENST00000494654 IGKV2D-24A0A075B6R9 120 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 A0A1W2PNM2 257 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 H0Y9P7 68 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 LINC00313P59037 77 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 PRR4Q16378 134 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 DEFB113Q30KQ7 82 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 KRTAP24-1Q3LI83 254 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 CLPSL2Q6UWE3 100 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 PRR26Q8N8Z3 221 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 CSNK1G2-AS1Q8NCQ2 148 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 TLN2Q9Y4G6 2542 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 NOTCH3Q9UM47 2321 aa1.77□□□□□ -2.13
MDC1-208ENST00000494654 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
MDC1-208ENST00000494654 ZANQ9Y493 2812 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 IGLV7-46A0A075B6I9 117 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 KRTAP29-1A8MX34 341 aaPredicted RBP1.76□□□□□ -2.13
MDC1-208ENST00000494654 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
MDC1-208ENST00000494654 REG3AQ06141 175 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 C1orf137Q5JT78 98 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 C10orf99Q6UWK7 81 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 C4orf3Q8WVX3 66 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 KRTAP17-1Q9BYP8 105 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 ZNF702PQ9H963 129 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 NOP10Q9NPE3 64 aaKnown RBP1.76□□□□□ -2.13
MDC1-208ENST00000494654 DHRS4-AS1Q9P1J3 65 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 C6orf48Q9UBA6 75 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 NBEAL2Q6ZNJ1 2754 aa1.76□□□□□ -2.13
MDC1-208ENST00000494654 IGLV5-37A0A075B6J1 123 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 A0A1W2PPR1 153 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 CMC4P56277 68 aaPredicted RBP1.75□□□□□ -2.13
MDC1-208ENST00000494654 DEFB112Q30KQ8 113 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 UNQ6190/PRO20217Q6UXQ8 127 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 C18orf65Q6ZTR6 163 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 Q8N377 158 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 HIVEP2P31629 2446 aa1.75□□□□□ -2.13
MDC1-208ENST00000494654 ANK2Q01484 3957 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 PRB2P02812 416 aaPredicted RBP1.74□□□□□ -2.13
MDC1-208ENST00000494654 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
MDC1-208ENST00000494654 MSMBP08118 114 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 SPRR1AP35321 89 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 SPINK7P58062 85 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 EGFEM1PQ0D2K5 195 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 DEFB136Q30KP8 78 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 Q6ZRX8 168 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 WFDC13Q8IUB5 93 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 PRR34Q9NV39 138 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
MDC1-208ENST00000494654 WNK1Q9H4A3 2382 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 IGLV8-61A0A075B6I0 122 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 IGLV10-54A0A075B6I4 117 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 DEFB131BA0A096LNP1 70 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 RTL8CO15255 209 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 GIG44P09565 113 aaPredicted RBP1.73□□□□□ -2.13
MDC1-208ENST00000494654 KRTAP1-1Q07627 177 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 SERTAD4-AS1Q5TG53 156 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 Q8NAQ8 132 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 PRAC1Q96KF2 57 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 CCL19Q99731 98 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 XAGE1AQ9HD64 81 aa1.73□□□□□ -2.13
MDC1-208ENST00000494654 MMP24-AS1A0A0U1RRL7 71 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 KRTAP4-16G5E9R7 235 aaPredicted RBP1.72□□□□□ -2.13
MDC1-208ENST00000494654 LELP1Q5T871 98 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 Q6ZR54 194 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 C7orf33Q8WU49 177 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 CAMK2N2Q96S95 79 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 TENM1Q9UKZ4 2725 aa1.72□□□□□ -2.13
MDC1-208ENST00000494654 NOTCH1P46531 2555 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 MGAM2Q2M2H8 2515 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 DNAJC9-AS1A6NH13 148 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 RPL37AP8A6NKH3 93 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 A8MWP4 228 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 B4DSR2 109 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 H0Y9J4 135 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 IGLV1-51P01701 117 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 TLX1NBP0CAT3 122 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 SPAG11AQ6PDA7 123 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 WFDC10BQ8IUB3 73 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 C15orf56Q8N910 161 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 RETNLBQ9BQ08 111 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 TP53AIP1Q9HCN2 124 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 VPS13DQ5THJ4 4388 aa1.71□□□□□ -2.14
MDC1-208ENST00000494654 TRRAPQ9Y4A5 3859 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 IGLV1-50A0A075B6I6 118 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 HRES1P13985 223 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 RYR3Q15413 4870 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
MDC1-208ENST00000494654 ADM2Q7Z4H4 148 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms