RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
ERCC3-209ENST00000494464 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
ERCC3-209ENST00000494464 BCE1O60756 84 aa7.92□□□□□ -1.14
ERCC3-209ENST00000494464 OBSCN-AS1Q96MR7 158 aa7.92□□□□□ -1.14
ERCC3-209ENST00000494464 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
ERCC3-209ENST00000494464 FAM240AA0A1B0GVK7 77 aa7.91□□□□□ -1.14
ERCC3-209ENST00000494464 TMEM256-PLSCR3K7ERE1 68 aa7.91□□□□□ -1.14
ERCC3-209ENST00000494464 SPRR1AP35321 89 aa7.91□□□□□ -1.14
ERCC3-209ENST00000494464 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.91□□□□□ -1.14
ERCC3-209ENST00000494464 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.14
ERCC3-209ENST00000494464 GHRHP01286 108 aa7.9□□□□□ -1.14
ERCC3-209ENST00000494464 LRP2P98164 4655 aa7.89□□□□□ -1.15
ERCC3-209ENST00000494464 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
ERCC3-209ENST00000494464 JMJD7-PLA2G4BH0Y9G9 81 aa7.87□□□□□ -1.15
ERCC3-209ENST00000494464 Q6ZQY7 126 aa7.87□□□□□ -1.15
ERCC3-209ENST00000494464 KRTAP13-1Q8IUC0 172 aa7.87□□□□□ -1.15
ERCC3-209ENST00000494464 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
ERCC3-209ENST00000494464 Q6ZRX8 168 aa7.86□□□□□ -1.15
ERCC3-209ENST00000494464 B5MCH6 92 aa7.85□□□□□ -1.15
ERCC3-209ENST00000494464 ACYP1P07311 99 aa7.85□□□□□ -1.15
ERCC3-209ENST00000494464 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
ERCC3-209ENST00000494464 ETDCA0A1B0GVM5 59 aa7.84□□□□□ -1.15
ERCC3-209ENST00000494464 UBE2AP49459 152 aa7.84□□□□□ -1.16
ERCC3-209ENST00000494464 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
ERCC3-209ENST00000494464 A0A087X002 238 aa7.8□□□□□ -1.16
ERCC3-209ENST00000494464 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
ERCC3-209ENST00000494464 Q9BRP9 147 aa7.8□□□□□ -1.16
ERCC3-209ENST00000494464 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 CRYGAP11844 174 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 PRLHP81277 87 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 C21orf62-AS1Q17RA5 79 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
ERCC3-209ENST00000494464 RBM3P98179 157 aaKnown RBP7.78□□□□□ -1.16
ERCC3-209ENST00000494464 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
ERCC3-209ENST00000494464 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
ERCC3-209ENST00000494464 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
ERCC3-209ENST00000494464 CCKP06307 115 aa7.77□□□□□ -1.17
ERCC3-209ENST00000494464 PDE6GP18545 87 aa7.76□□□□□ -1.17
ERCC3-209ENST00000494464 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
ERCC3-209ENST00000494464 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
ERCC3-209ENST00000494464 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
ERCC3-209ENST00000494464 LPAP08519 4548 aa7.76□□□□□ -1.17
ERCC3-209ENST00000494464 Q6ZQT0 140 aa7.75□□□□□ -1.17
ERCC3-209ENST00000494464 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
ERCC3-209ENST00000494464 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
ERCC3-209ENST00000494464 Q8N377 158 aa7.74□□□□□ -1.17
ERCC3-209ENST00000494464 DSCR8Q96T75 97 aa7.74□□□□□ -1.17
ERCC3-209ENST00000494464 TRBV7-4A0A0J9YYF1 115 aa7.73□□□□□ -1.17
ERCC3-209ENST00000494464 A0A1B0GV72 72 aa7.73□□□□□ -1.17
ERCC3-209ENST00000494464 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
ERCC3-209ENST00000494464 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
ERCC3-209ENST00000494464 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
ERCC3-209ENST00000494464 ERC2-IT1O76042 136 aa7.71□□□□□ -1.17
ERCC3-209ENST00000494464 LINC00643Q86TS7 51 aa7.71□□□□□ -1.17
ERCC3-209ENST00000494464 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.17
ERCC3-209ENST00000494464 ST20-AS1Q8NBB2 130 aa7.7□□□□□ -1.18
ERCC3-209ENST00000494464 PRR4Q16378 134 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 Q6Q795 121 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 DEFB105AQ8NG35 78 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 SPRR4Q96PI1 79 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
ERCC3-209ENST00000494464 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
ERCC3-209ENST00000494464 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
ERCC3-209ENST00000494464 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
ERCC3-209ENST00000494464 SPRR1BP22528 89 aa7.66□□□□□ -1.18
ERCC3-209ENST00000494464 Q6JHZ5 121 aa7.66□□□□□ -1.18
ERCC3-209ENST00000494464 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
ERCC3-209ENST00000494464 IMUPQ9GZP8 106 aa7.65□□□□□ -1.18
ERCC3-209ENST00000494464 ATP5EP2Q5VTU8 51 aa7.64□□□□□ -1.19
ERCC3-209ENST00000494464 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
ERCC3-209ENST00000494464 UBL5Q9BZL1 73 aa7.64□□□□□ -1.19
ERCC3-209ENST00000494464 A0A1B0GW54 56 aa7.63□□□□□ -1.19
ERCC3-209ENST00000494464 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
ERCC3-209ENST00000494464 F8WEM9 126 aa7.62□□□□□ -1.19
ERCC3-209ENST00000494464 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
ERCC3-209ENST00000494464 PCP4P48539 62 aa7.6□□□□□ -1.19
ERCC3-209ENST00000494464 SPAG11AQ6PDA7 123 aa7.6□□□□□ -1.19
ERCC3-209ENST00000494464 Q8NBF4 154 aa7.59□□□□□ -1.19
ERCC3-209ENST00000494464 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.2
ERCC3-209ENST00000494464 Q6ZVQ6 151 aa7.58□□□□□ -1.2
ERCC3-209ENST00000494464 A0A1W2PNM2 257 aa7.57□□□□□ -1.2
ERCC3-209ENST00000494464 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
ERCC3-209ENST00000494464 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
ERCC3-209ENST00000494464 CXCL6P80162 114 aa7.54□□□□□ -1.2
ERCC3-209ENST00000494464 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
ERCC3-209ENST00000494464 IGFL1Q6UW32 110 aa7.54□□□□□ -1.2
ERCC3-209ENST00000494464 SPINK1P00995 79 aa7.53□□□□□ -1.2
ERCC3-209ENST00000494464 IGLV7-46A0A075B6I9 117 aa7.52□□□□□ -1.21
ERCC3-209ENST00000494464 MOBPQ13875 183 aa7.52□□□□□ -1.21
ERCC3-209ENST00000494464 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
ERCC3-209ENST00000494464 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
ERCC3-209ENST00000494464 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
ERCC3-209ENST00000494464 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
ERCC3-209ENST00000494464 NREPQ16612 68 aa7.5□□□□□ -1.21
ERCC3-209ENST00000494464 FAM236AA0A1B0GUQ0 79 aa7.49□□□□□ -1.21
ERCC3-209ENST00000494464 FAM236BA0A1B0GV22 79 aa7.49□□□□□ -1.21
ERCC3-209ENST00000494464 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
ERCC3-209ENST00000494464 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms