RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 Q1T7F1 81 aa8.77□□□□□ -1
VCP-207ENST00000493886 Q6ZRX8 168 aa8.77□□□□□ -1
VCP-207ENST00000493886 TENM2Q9NT68 2774 aa8.77□□□□□ -1
VCP-207ENST00000493886 A0A096LNI7 61 aa8.77□□□□□ -1.01
VCP-207ENST00000493886 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
VCP-207ENST00000493886 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
VCP-207ENST00000493886 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.76□□□□□ -1.01
VCP-207ENST00000493886 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 NREPQ16612 68 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 Q8N377 158 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
VCP-207ENST00000493886 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
VCP-207ENST00000493886 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
VCP-207ENST00000493886 Q9BRP9 147 aa8.75□□□□□ -1.01
VCP-207ENST00000493886 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
VCP-207ENST00000493886 DNAH7Q8WXX0 4024 aa8.73□□□□□ -1.01
VCP-207ENST00000493886 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
VCP-207ENST00000493886 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
VCP-207ENST00000493886 BCE1O60756 84 aa8.72□□□□□ -1.01
VCP-207ENST00000493886 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
VCP-207ENST00000493886 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
VCP-207ENST00000493886 LCA10Q71F78 164 aa8.71□□□□□ -1.01
VCP-207ENST00000493886 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
VCP-207ENST00000493886 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
VCP-207ENST00000493886 PRKDCP78527 4128 aaKnown RBP8.7□□□□□ -1.02
VCP-207ENST00000493886 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
VCP-207ENST00000493886 ERC2-IT1O76042 136 aa8.7□□□□□ -1.02
VCP-207ENST00000493886 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
VCP-207ENST00000493886 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
VCP-207ENST00000493886 A6NN06 94 aa8.68□□□□□ -1.02
VCP-207ENST00000493886 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
VCP-207ENST00000493886 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
VCP-207ENST00000493886 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
VCP-207ENST00000493886 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
VCP-207ENST00000493886 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
VCP-207ENST00000493886 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
VCP-207ENST00000493886 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
VCP-207ENST00000493886 STARD9Q9P2P6 4700 aa8.66□□□□□ -1.02
VCP-207ENST00000493886 Q5VV11 94 aa8.66□□□□□ -1.02
VCP-207ENST00000493886 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
VCP-207ENST00000493886 VPS13DQ5THJ4 4388 aa8.64□□□□□ -1.03
VCP-207ENST00000493886 UBE2AP49459 152 aa8.64□□□□□ -1.03
VCP-207ENST00000493886 PRR4Q16378 134 aa8.64□□□□□ -1.03
VCP-207ENST00000493886 MEGF8Q7Z7M0 2845 aa8.63□□□□□ -1.03
VCP-207ENST00000493886 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
VCP-207ENST00000493886 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
VCP-207ENST00000493886 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
VCP-207ENST00000493886 PRLHP81277 87 aa8.62□□□□□ -1.03
VCP-207ENST00000493886 TNP2Q05952 138 aa8.62□□□□□ -1.03
VCP-207ENST00000493886 DNHD1Q96M86 4753 aa8.61□□□□□ -1.03
VCP-207ENST00000493886 PRAC1Q96KF2 57 aa8.61□□□□□ -1.03
VCP-207ENST00000493886 OCR1Q9BZK8 76 aa8.61□□□□□ -1.03
VCP-207ENST00000493886 LINC00313P59037 77 aa8.6□□□□□ -1.03
VCP-207ENST00000493886 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
VCP-207ENST00000493886 DEFB116Q30KQ4 102 aa8.6□□□□□ -1.03
VCP-207ENST00000493886 Q8NBF4 154 aa8.6□□□□□ -1.03
VCP-207ENST00000493886 A0A087WTM6 91 aa8.58□□□□□ -1.04
VCP-207ENST00000493886 PANO1I0J062 215 aa8.58□□□□□ -1.04
VCP-207ENST00000493886 K7EQZ3 153 aa8.57□□□□□ -1.04
VCP-207ENST00000493886 Q6ZR54 194 aa8.57□□□□□ -1.04
VCP-207ENST00000493886 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
VCP-207ENST00000493886 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
VCP-207ENST00000493886 A6NED7 52 aa8.55□□□□□ -1.04
VCP-207ENST00000493886 DSCR10P59022 87 aa8.55□□□□□ -1.04
VCP-207ENST00000493886 A0A1B0GW54 56 aa8.54□□□□□ -1.04
VCP-207ENST00000493886 H0Y9J4 135 aa8.54□□□□□ -1.04
VCP-207ENST00000493886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
VCP-207ENST00000493886 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
VCP-207ENST00000493886 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
VCP-207ENST00000493886 IGFL1Q6UW32 110 aa8.52□□□□□ -1.05
VCP-207ENST00000493886 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
VCP-207ENST00000493886 RTL8CO15255 209 aa8.51□□□□□ -1.05
VCP-207ENST00000493886 A0A087WSZ3 146 aa8.5□□□□□ -1.05
VCP-207ENST00000493886 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
VCP-207ENST00000493886 WFDC13Q8IUB5 93 aa8.5□□□□□ -1.05
VCP-207ENST00000493886 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
VCP-207ENST00000493886 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
VCP-207ENST00000493886 IGLV8-61A0A075B6I0 122 aa8.48□□□□□ -1.05
VCP-207ENST00000493886 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
VCP-207ENST00000493886 A0A0A0MQY5 61 aa8.48□□□□□ -1.05
VCP-207ENST00000493886 LY6G6CO95867 125 aa8.48□□□□□ -1.05
VCP-207ENST00000493886 SPRR1BP22528 89 aa8.47□□□□□ -1.05
VCP-207ENST00000493886 MOBPQ13875 183 aa8.47□□□□□ -1.05
VCP-207ENST00000493886 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
VCP-207ENST00000493886 MP68P56378 58 aa8.47□□□□□ -1.05
VCP-207ENST00000493886 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
VCP-207ENST00000493886 FBN3Q75N90 2809 aa8.46□□□□□ -1.05
VCP-207ENST00000493886 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
VCP-207ENST00000493886 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
VCP-207ENST00000493886 HECTD4Q9Y4D8 3996 aa8.44□□□□□ -1.06
VCP-207ENST00000493886 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
VCP-207ENST00000493886 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
VCP-207ENST00000493886 TGP01266 2768 aa8.43□□□□□ -1.06
VCP-207ENST00000493886 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
VCP-207ENST00000493886 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
VCP-207ENST00000493886 WWC2-AS2Q96NR7 200 aa8.41□□□□□ -1.06
VCP-207ENST00000493886 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.07
VCP-207ENST00000493886 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms