RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 A0A087X002 238 aa4.94□□□□□ -1.62
SEMA3F-209ENST00000493743 PRSS2P07478 247 aa4.94□□□□□ -1.62
SEMA3F-209ENST00000493743 S100A7L2Q5SY68 101 aa4.94□□□□□ -1.62
SEMA3F-209ENST00000493743 COX7B2Q8TF08 81 aa4.94□□□□□ -1.62
SEMA3F-209ENST00000493743 IGKV3OR2-268A0A0C4DH90 116 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 COX6CP09669 75 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 XCL1P47992 114 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 COX17Q14061 63 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 ASB16-AS1Q495Z4 193 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 C6orf99Q4VX62 202 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 C15orf56Q8N910 161 aa4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 ZNF625Q96I27 306 aaPredicted RBP4.93□□□□□ -1.62
SEMA3F-209ENST00000493743 LINC00313P59037 77 aa4.92□□□□□ -1.62
SEMA3F-209ENST00000493743 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
SEMA3F-209ENST00000493743 Q6JHZ5 121 aa4.92□□□□□ -1.62
SEMA3F-209ENST00000493743 C2orf82Q6UX34 121 aa4.92□□□□□ -1.62
SEMA3F-209ENST00000493743 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 IGKV2-24A0A0C4DH68 120 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 H7BZZ5 65 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 HIGD2BQ4VC39 106 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 LINC00337Q8N6G1 96 aa4.91□□□□□ -1.62
SEMA3F-209ENST00000493743 TNXBP22105 4242 aa4.9□□□□□ -1.62
SEMA3F-209ENST00000493743 TRAV7A0A075B6U4 112 aa4.9□□□□□ -1.63
SEMA3F-209ENST00000493743 GVQW2A0A096LPI5 108 aaPredicted RBP4.9□□□□□ -1.63
SEMA3F-209ENST00000493743 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
SEMA3F-209ENST00000493743 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.63
SEMA3F-209ENST00000493743 PRO1854Q9UHT4 67 aa4.9□□□□□ -1.63
SEMA3F-209ENST00000493743 A0A096LNI7 61 aa4.89□□□□□ -1.63
SEMA3F-209ENST00000493743 TRBV30A0A0K0K1B3 111 aa4.89□□□□□ -1.63
SEMA3F-209ENST00000493743 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
SEMA3F-209ENST00000493743 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
SEMA3F-209ENST00000493743 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
SEMA3F-209ENST00000493743 LITAFQ99732 161 aa4.88□□□□□ -1.63
SEMA3F-209ENST00000493743 TOMM7Q9P0U1 55 aa4.88□□□□□ -1.63
SEMA3F-209ENST00000493743 SPAG11BQ08648 103 aa4.87□□□□□ -1.63
SEMA3F-209ENST00000493743 SPINK6Q6UWN8 80 aa4.87□□□□□ -1.63
SEMA3F-209ENST00000493743 CYP4F30PQ9H0H9 118 aa4.87□□□□□ -1.63
SEMA3F-209ENST00000493743 LRP2P98164 4655 aa4.86□□□□□ -1.63
SEMA3F-209ENST00000493743 Q6ZRP5 223 aa4.86□□□□□ -1.63
SEMA3F-209ENST00000493743 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
SEMA3F-209ENST00000493743 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
SEMA3F-209ENST00000493743 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 LINC00158P58513 81 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 MUSTN1Q8IVN3 82 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 C20orf197Q8N268 126 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
SEMA3F-209ENST00000493743 CFC1BP0CG36 223 aa4.84□□□□□ -1.63
SEMA3F-209ENST00000493743 CFC1P0CG37 223 aa4.84□□□□□ -1.63
SEMA3F-209ENST00000493743 SYCNQ0VAF6 134 aa4.84□□□□□ -1.63
SEMA3F-209ENST00000493743 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
SEMA3F-209ENST00000493743 CAMK2N2Q96S95 79 aa4.84□□□□□ -1.63
SEMA3F-209ENST00000493743 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
SEMA3F-209ENST00000493743 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
SEMA3F-209ENST00000493743 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
SEMA3F-209ENST00000493743 A6NN06 94 aa4.82□□□□□ -1.64
SEMA3F-209ENST00000493743 CLEC2BQ92478 149 aa4.82□□□□□ -1.64
SEMA3F-209ENST00000493743 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
SEMA3F-209ENST00000493743 UNQ6190/PRO20217Q6UXQ8 127 aa4.81□□□□□ -1.64
SEMA3F-209ENST00000493743 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
SEMA3F-209ENST00000493743 SND1-IT1Q9HBX3 110 aa4.8□□□□□ -1.64
SEMA3F-209ENST00000493743 F8WEM9 126 aa4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 LIMD2Q9BT23 127 aa4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 C6orf48Q9UBA6 75 aa4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
SEMA3F-209ENST00000493743 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
SEMA3F-209ENST00000493743 SOSTDC1Q6X4U4 206 aa4.78□□□□□ -1.64
SEMA3F-209ENST00000493743 C1orf137Q5JT78 98 aa4.77□□□□□ -1.65
SEMA3F-209ENST00000493743 H0YGX0 51 aa4.76□□□□□ -1.65
SEMA3F-209ENST00000493743 RPL28P46779 137 aaKnown RBP4.76□□□□□ -1.65
SEMA3F-209ENST00000493743 Q1RN00 199 aa4.76□□□□□ -1.65
SEMA3F-209ENST00000493743 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
SEMA3F-209ENST00000493743 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
SEMA3F-209ENST00000493743 DNAL4O96015 105 aa4.75□□□□□ -1.65
SEMA3F-209ENST00000493743 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
SEMA3F-209ENST00000493743 IGKV2-28A0A075B6P5 120 aa4.74□□□□□ -1.65
SEMA3F-209ENST00000493743 IGKV2D-28P01615 120 aa4.74□□□□□ -1.65
SEMA3F-209ENST00000493743 LPAP08519 4548 aa4.74□□□□□ -1.65
SEMA3F-209ENST00000493743 IGLV6-57P01721 117 aa4.73□□□□□ -1.65
SEMA3F-209ENST00000493743 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
SEMA3F-209ENST00000493743 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
SEMA3F-209ENST00000493743 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
SEMA3F-209ENST00000493743 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
SEMA3F-209ENST00000493743 H3BQ85 93 aa4.72□□□□□ -1.65
SEMA3F-209ENST00000493743 IGLV9-49A0A0B4J1Y8 123 aa4.71□□□□□ -1.66
SEMA3F-209ENST00000493743 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
SEMA3F-209ENST00000493743 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
SEMA3F-209ENST00000493743 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
SEMA3F-209ENST00000493743 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
SEMA3F-209ENST00000493743 H7C2G1 150 aa4.7□□□□□ -1.66
SEMA3F-209ENST00000493743 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
SEMA3F-209ENST00000493743 C9orf129Q5T035 196 aaKnown RBP4.7□□□□□ -1.66
SEMA3F-209ENST00000493743 SMIM11BQ8TCY0 68 aa4.7□□□□□ -1.66
SEMA3F-209ENST00000493743 KRTAP7-1Q8IUC3 87 aa4.69□□□□□ -1.66
SEMA3F-209ENST00000493743 KCNQ1DNQ9H478 68 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms