RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 Q8N377 158 aa7.67□□□□□ -1.18
VPS52-220ENST00000493674 GHRHP01286 108 aa7.66□□□□□ -1.18
VPS52-220ENST00000493674 RPL37AP61513 92 aaKnown RBP7.65□□□□□ -1.18
VPS52-220ENST00000493674 TEN1Q86WV5 123 aa7.65□□□□□ -1.18
VPS52-220ENST00000493674 OBSCN-AS1Q96MR7 158 aa7.65□□□□□ -1.18
VPS52-220ENST00000493674 TEX49A0A1B0GTD5 131 aa7.64□□□□□ -1.19
VPS52-220ENST00000493674 SMR3BP02814 79 aaPredicted RBP7.64□□□□□ -1.19
VPS52-220ENST00000493674 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
VPS52-220ENST00000493674 SPRR4Q96PI1 79 aa7.64□□□□□ -1.19
VPS52-220ENST00000493674 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
VPS52-220ENST00000493674 SMIM29Q86T20 159 aa7.63□□□□□ -1.19
VPS52-220ENST00000493674 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
VPS52-220ENST00000493674 ABCA13Q86UQ4 5058 aa7.62□□□□□ -1.19
VPS52-220ENST00000493674 Q5VSD8 79 aa7.61□□□□□ -1.19
VPS52-220ENST00000493674 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
VPS52-220ENST00000493674 PCLOQ9Y6V0 5065 aa7.6□□□□□ -1.19
VPS52-220ENST00000493674 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
VPS52-220ENST00000493674 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
VPS52-220ENST00000493674 GAGE2AQ6NT46 116 aa7.59□□□□□ -1.19
VPS52-220ENST00000493674 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
VPS52-220ENST00000493674 JMJD7-PLA2G4BH0Y9G9 81 aa7.58□□□□□ -1.2
VPS52-220ENST00000493674 SPINK6Q6UWN8 80 aa7.58□□□□□ -1.2
VPS52-220ENST00000493674 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
VPS52-220ENST00000493674 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
VPS52-220ENST00000493674 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
VPS52-220ENST00000493674 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
VPS52-220ENST00000493674 LAMTOR3Q9UHA4 124 aa7.57□□□□□ -1.2
VPS52-220ENST00000493674 TRBV7-4A0A0J9YYF1 115 aa7.56□□□□□ -1.2
VPS52-220ENST00000493674 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
VPS52-220ENST00000493674 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
VPS52-220ENST00000493674 RBM3P98179 157 aaKnown RBP7.54□□□□□ -1.2
VPS52-220ENST00000493674 FAM229BQ4G0N7 80 aa7.54□□□□□ -1.2
VPS52-220ENST00000493674 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
VPS52-220ENST00000493674 Q6ZQT0 140 aa7.52□□□□□ -1.21
VPS52-220ENST00000493674 F8WEM9 126 aa7.51□□□□□ -1.21
VPS52-220ENST00000493674 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
VPS52-220ENST00000493674 PDE6GP18545 87 aa7.5□□□□□ -1.21
VPS52-220ENST00000493674 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
VPS52-220ENST00000493674 A0A087X002 238 aa7.49□□□□□ -1.21
VPS52-220ENST00000493674 Q6JHZ5 121 aa7.49□□□□□ -1.21
VPS52-220ENST00000493674 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
VPS52-220ENST00000493674 DSCR8Q96T75 97 aa7.49□□□□□ -1.21
VPS52-220ENST00000493674 CCKP06307 115 aa7.48□□□□□ -1.21
VPS52-220ENST00000493674 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
VPS52-220ENST00000493674 Q8NBF4 154 aa7.48□□□□□ -1.21
VPS52-220ENST00000493674 CDIP1Q9H305 208 aa7.48□□□□□ -1.21
VPS52-220ENST00000493674 FLG2Q5D862 2391 aaPredicted RBP7.48□□□□□ -1.21
VPS52-220ENST00000493674 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
VPS52-220ENST00000493674 IGLV9-49A0A0B4J1Y8 123 aa7.46□□□□□ -1.22
VPS52-220ENST00000493674 FAM240AA0A1B0GVK7 77 aa7.46□□□□□ -1.22
VPS52-220ENST00000493674 A0A1W2PNM2 257 aa7.46□□□□□ -1.22
VPS52-220ENST00000493674 MOBPQ13875 183 aa7.45□□□□□ -1.22
VPS52-220ENST00000493674 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
VPS52-220ENST00000493674 CRYGAP11844 174 aa7.44□□□□□ -1.22
VPS52-220ENST00000493674 C9orf153Q5TBE3 101 aa7.44□□□□□ -1.22
VPS52-220ENST00000493674 Q6Q795 121 aa7.44□□□□□ -1.22
VPS52-220ENST00000493674 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
VPS52-220ENST00000493674 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
VPS52-220ENST00000493674 LRP1Q07954 4544 aaKnown RBP7.42□□□□□ -1.22
VPS52-220ENST00000493674 A0A1B0GW54 56 aa7.42□□□□□ -1.22
VPS52-220ENST00000493674 MT-ATP8P03928 68 aa7.42□□□□□ -1.22
VPS52-220ENST00000493674 ACYP1P07311 99 aa7.41□□□□□ -1.22
VPS52-220ENST00000493674 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
VPS52-220ENST00000493674 TNXBP22105 4242 aa7.39□□□□□ -1.23
VPS52-220ENST00000493674 CD164Q04900 197 aa7.39□□□□□ -1.23
VPS52-220ENST00000493674 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
VPS52-220ENST00000493674 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
VPS52-220ENST00000493674 TRBV7-7A0A0K0K1E9 115 aa7.36□□□□□ -1.23
VPS52-220ENST00000493674 KRTAP29-1A8MX34 341 aaPredicted RBP7.36□□□□□ -1.23
VPS52-220ENST00000493674 OXTP01178 125 aa7.36□□□□□ -1.23
VPS52-220ENST00000493674 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
VPS52-220ENST00000493674 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
VPS52-220ENST00000493674 SS18L2Q9UHA2 77 aa7.33□□□□□ -1.24
VPS52-220ENST00000493674 A0A087WSZ3 146 aa7.32□□□□□ -1.24
VPS52-220ENST00000493674 Q5XG85 94 aa7.31□□□□□ -1.24
VPS52-220ENST00000493674 Q6ZVQ6 151 aa7.31□□□□□ -1.24
VPS52-220ENST00000493674 J3QL48 77 aa7.3□□□□□ -1.24
VPS52-220ENST00000493674 LINC00304Q8N9R0 145 aa7.3□□□□□ -1.24
VPS52-220ENST00000493674 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
VPS52-220ENST00000493674 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
VPS52-220ENST00000493674 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
VPS52-220ENST00000493674 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
VPS52-220ENST00000493674 HRCT1Q6UXD1 115 aa7.29□□□□□ -1.24
VPS52-220ENST00000493674 HERC1Q15751 4861 aa7.29□□□□□ -1.24
VPS52-220ENST00000493674 SPINK1P00995 79 aa7.28□□□□□ -1.24
VPS52-220ENST00000493674 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
VPS52-220ENST00000493674 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
VPS52-220ENST00000493674 Q96NJ1 140 aa7.27□□□□□ -1.25
VPS52-220ENST00000493674 LINC00472Q9H8W2 130 aa7.27□□□□□ -1.25
VPS52-220ENST00000493674 NREPQ16612 68 aa7.25□□□□□ -1.25
VPS52-220ENST00000493674 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
VPS52-220ENST00000493674 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
VPS52-220ENST00000493674 CCDC179H3BU77 68 aa7.23□□□□□ -1.25
VPS52-220ENST00000493674 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
VPS52-220ENST00000493674 CXCL6P80162 114 aa7.22□□□□□ -1.25
VPS52-220ENST00000493674 DSCR10P59022 87 aa7.19□□□□□ -1.26
VPS52-220ENST00000493674 C1orf195Q5TG92 126 aa7.19□□□□□ -1.26
VPS52-220ENST00000493674 SMIM20Q8N5G0 67 aa7.19□□□□□ -1.26
VPS52-220ENST00000493674 IMUPQ9GZP8 106 aa7.19□□□□□ -1.26
VPS52-220ENST00000493674 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms