RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
SMARCE1-211ENST00000493660 Q8IZM0 81 aa4.76□□□□□ -1.65
SMARCE1-211ENST00000493660 COX7B2Q8TF08 81 aa4.76□□□□□ -1.65
SMARCE1-211ENST00000493660 ZCCHC13Q8WW36 166 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-211ENST00000493660 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
SMARCE1-211ENST00000493660 IGKV4-1P06312 121 aa4.75□□□□□ -1.65
SMARCE1-211ENST00000493660 ELOF1P60002 83 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-211ENST00000493660 LINC00158P58513 81 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 M0R2N4 97 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 NDUFB1O75438 58 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
SMARCE1-211ENST00000493660 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
SMARCE1-211ENST00000493660 A6NED7 52 aa4.73□□□□□ -1.65
SMARCE1-211ENST00000493660 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
SMARCE1-211ENST00000493660 NBDYA0A0U1RRE5 68 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 PLECQ15149 4684 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 TOMM7Q9P0U1 55 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 J3QL48 77 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 LINC00313P59037 77 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 SPAG11BQ08648 103 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 CASC10Q5T4H9 136 aa4.72□□□□□ -1.65
SMARCE1-211ENST00000493660 MOBPQ13875 183 aa4.71□□□□□ -1.65
SMARCE1-211ENST00000493660 C9orf116Q5BN46 136 aaPredicted RBP4.71□□□□□ -1.65
SMARCE1-211ENST00000493660 LINC00575Q6W349 94 aa4.71□□□□□ -1.65
SMARCE1-211ENST00000493660 Q9BRP9 147 aa4.71□□□□□ -1.65
SMARCE1-211ENST00000493660 STARD9Q9P2P6 4700 aa4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 GVQW2A0A096LPI5 108 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 MP68P56378 58 aa4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
SMARCE1-211ENST00000493660 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
SMARCE1-211ENST00000493660 COX17Q14061 63 aa4.7□□□□□ -1.66
SMARCE1-211ENST00000493660 ASB16-AS1Q495Z4 193 aa4.7□□□□□ -1.66
SMARCE1-211ENST00000493660 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
SMARCE1-211ENST00000493660 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
SMARCE1-211ENST00000493660 Q6ZR54 194 aa4.69□□□□□ -1.66
SMARCE1-211ENST00000493660 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
SMARCE1-211ENST00000493660 C14orf177Q52M58 125 aa4.68□□□□□ -1.66
SMARCE1-211ENST00000493660 FAM30AQ9NZY2 134 aa4.68□□□□□ -1.66
SMARCE1-211ENST00000493660 COX7BP24311 80 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 CAMK2N2Q96S95 79 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 A0A087X002 238 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 ETDCA0A1B0GVM5 59 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 HIGD2BQ4VC39 106 aa4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-211ENST00000493660 LY6G6CO95867 125 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 UNQ6190/PRO20217Q6UXQ8 127 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 SMIM29Q86T20 159 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 C6orf48Q9UBA6 75 aa4.66□□□□□ -1.66
SMARCE1-211ENST00000493660 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.66
SMARCE1-211ENST00000493660 C6orf99Q4VX62 202 aa4.65□□□□□ -1.66
SMARCE1-211ENST00000493660 C10orf25Q5T742 122 aa4.65□□□□□ -1.66
SMARCE1-211ENST00000493660 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
SMARCE1-211ENST00000493660 Q8N9L7 120 aa4.65□□□□□ -1.67
SMARCE1-211ENST00000493660 TLX1NBP0CAT3 122 aa4.64□□□□□ -1.67
SMARCE1-211ENST00000493660 CNBPP62633 177 aaKnown RBP4.64□□□□□ -1.67
SMARCE1-211ENST00000493660 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SMARCE1-211ENST00000493660 C1orf134Q5TEV5 83 aa4.63□□□□□ -1.67
SMARCE1-211ENST00000493660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-211ENST00000493660 PRR4Q16378 134 aa4.63□□□□□ -1.67
SMARCE1-211ENST00000493660 LYSTQ99698 3801 aa4.63□□□□□ -1.67
SMARCE1-211ENST00000493660 TENM2Q9NT68 2774 aa4.62□□□□□ -1.67
SMARCE1-211ENST00000493660 H0Y9J4 135 aa4.62□□□□□ -1.67
SMARCE1-211ENST00000493660 Q6ZQY7 126 aa4.62□□□□□ -1.67
SMARCE1-211ENST00000493660 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
SMARCE1-211ENST00000493660 A0A1B0GW54 56 aa4.61□□□□□ -1.67
SMARCE1-211ENST00000493660 TGP01266 2768 aa4.61□□□□□ -1.67
SMARCE1-211ENST00000493660 A0A087WTM6 91 aa4.61□□□□□ -1.67
SMARCE1-211ENST00000493660 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
SMARCE1-211ENST00000493660 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
SMARCE1-211ENST00000493660 H3BPC8 53 aa4.6□□□□□ -1.67
SMARCE1-211ENST00000493660 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
SMARCE1-211ENST00000493660 PLA2G2DQ9UNK4 145 aa4.59□□□□□ -1.67
SMARCE1-211ENST00000493660 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
SMARCE1-211ENST00000493660 C9orf163Q8N9P6 203 aa4.58□□□□□ -1.68
SMARCE1-211ENST00000493660 ST20-AS1Q8NBB2 130 aa4.58□□□□□ -1.68
SMARCE1-211ENST00000493660 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
SMARCE1-211ENST00000493660 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SMARCE1-211ENST00000493660 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
SMARCE1-211ENST00000493660 DNAH17Q9UFH2 4485 aa4.57□□□□□ -1.68
SMARCE1-211ENST00000493660 IGLV5-37A0A075B6J1 123 aa4.57□□□□□ -1.68
SMARCE1-211ENST00000493660 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
SMARCE1-211ENST00000493660 RTL8CO15255 209 aa4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 COA5Q86WW8 74 aa4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 RETNLBQ9BQ08 111 aa4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 ZNF706Q9Y5V0 76 aaPredicted RBP4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
SMARCE1-211ENST00000493660 KRTAP19-1Q8IUB9 90 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms