RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 DEFB105AQ8NG35 78 aa6.37□□□□□ -1.39
LRTM1-202ENST00000493075 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
LRTM1-202ENST00000493075 PRO1933Q9H354 126 aa6.37□□□□□ -1.39
LRTM1-202ENST00000493075 S100A1P23297 94 aa6.36□□□□□ -1.39
LRTM1-202ENST00000493075 S100A2P29034 98 aa6.36□□□□□ -1.39
LRTM1-202ENST00000493075 SMIM29Q86T20 159 aa6.36□□□□□ -1.39
LRTM1-202ENST00000493075 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
LRTM1-202ENST00000493075 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
LRTM1-202ENST00000493075 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
LRTM1-202ENST00000493075 LINC01547P58512 204 aaPredicted RBP6.35□□□□□ -1.39
LRTM1-202ENST00000493075 Q1RN00 199 aa6.35□□□□□ -1.39
LRTM1-202ENST00000493075 Q5XG85 94 aa6.34□□□□□ -1.39
LRTM1-202ENST00000493075 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
LRTM1-202ENST00000493075 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.39
LRTM1-202ENST00000493075 H7C2G1 150 aa6.32□□□□□ -1.4
LRTM1-202ENST00000493075 S100A6P06703 90 aa6.32□□□□□ -1.4
LRTM1-202ENST00000493075 VAMP3Q15836 100 aa6.32□□□□□ -1.4
LRTM1-202ENST00000493075 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
LRTM1-202ENST00000493075 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
LRTM1-202ENST00000493075 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
LRTM1-202ENST00000493075 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
LRTM1-202ENST00000493075 hADV29S1A0JD25 119 aa6.26□□□□□ -1.41
LRTM1-202ENST00000493075 DLEU1O43261 78 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 COX8AP10176 69 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 F8WEM9 126 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 TCL1BO95988 128 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 Q6ZQY7 126 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 HIST1H4GQ99525 98 aa6.25□□□□□ -1.41
LRTM1-202ENST00000493075 IGLV8-61A0A075B6I0 122 aa6.24□□□□□ -1.41
LRTM1-202ENST00000493075 BVES-AS1Q5T3Y7 98 aa6.24□□□□□ -1.41
LRTM1-202ENST00000493075 Q6JHZ5 121 aa6.24□□□□□ -1.41
LRTM1-202ENST00000493075 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
LRTM1-202ENST00000493075 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
LRTM1-202ENST00000493075 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
LRTM1-202ENST00000493075 OCIAD2Q56VL3 154 aa6.22□□□□□ -1.41
LRTM1-202ENST00000493075 CLEC2BQ92478 149 aa6.2□□□□□ -1.42
LRTM1-202ENST00000493075 C12orf57Q99622 126 aa6.2□□□□□ -1.42
LRTM1-202ENST00000493075 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
LRTM1-202ENST00000493075 CFC1BP0CG36 223 aa6.19□□□□□ -1.42
LRTM1-202ENST00000493075 CFC1P0CG37 223 aa6.19□□□□□ -1.42
LRTM1-202ENST00000493075 IGFL1Q6UW32 110 aa6.19□□□□□ -1.42
LRTM1-202ENST00000493075 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
LRTM1-202ENST00000493075 H0YGX0 51 aa6.18□□□□□ -1.42
LRTM1-202ENST00000493075 SNCGO76070 127 aa6.18□□□□□ -1.42
LRTM1-202ENST00000493075 C14orf144Q96I85 54 aa6.18□□□□□ -1.42
LRTM1-202ENST00000493075 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
LRTM1-202ENST00000493075 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
LRTM1-202ENST00000493075 RAB37Q96AX2 223 aa6.17□□□□□ -1.42
LRTM1-202ENST00000493075 A0A0B4J2C4 111 aa6.16□□□□□ -1.42
LRTM1-202ENST00000493075 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
LRTM1-202ENST00000493075 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
LRTM1-202ENST00000493075 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.43
LRTM1-202ENST00000493075 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
LRTM1-202ENST00000493075 C2orf91Q6ZV80 131 aa6.14□□□□□ -1.43
LRTM1-202ENST00000493075 VAMP8Q9BV40 100 aa6.14□□□□□ -1.43
LRTM1-202ENST00000493075 A0A1B0GX51 115 aa6.12□□□□□ -1.43
LRTM1-202ENST00000493075 Q6Q795 121 aa6.12□□□□□ -1.43
LRTM1-202ENST00000493075 CEND1Q8N111 149 aa6.12□□□□□ -1.43
LRTM1-202ENST00000493075 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
LRTM1-202ENST00000493075 H3BUT2 72 aa6.11□□□□□ -1.43
LRTM1-202ENST00000493075 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
LRTM1-202ENST00000493075 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
LRTM1-202ENST00000493075 LST1O00453 97 aa6.1□□□□□ -1.43
LRTM1-202ENST00000493075 NDUFV3P56181 108 aaKnown RBP6.1□□□□□ -1.43
LRTM1-202ENST00000493075 MT1HP80294 61 aa6.1□□□□□ -1.43
LRTM1-202ENST00000493075 UBE2V1Q13404 147 aa6.09□□□□□ -1.43
LRTM1-202ENST00000493075 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
LRTM1-202ENST00000493075 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
LRTM1-202ENST00000493075 Q75L30 129 aa6.07□□□□□ -1.44
LRTM1-202ENST00000493075 H3BMG7 143 aa6.06□□□□□ -1.44
LRTM1-202ENST00000493075 FXYD2P54710 66 aa6.06□□□□□ -1.44
LRTM1-202ENST00000493075 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
LRTM1-202ENST00000493075 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
LRTM1-202ENST00000493075 H3BQ85 93 aa6.04□□□□□ -1.44
LRTM1-202ENST00000493075 FABP2P12104 132 aa6.04□□□□□ -1.44
LRTM1-202ENST00000493075 HSD52Q0P140 79 aa6.03□□□□□ -1.44
LRTM1-202ENST00000493075 PYY3Q5JQD4 70 aa6.03□□□□□ -1.44
LRTM1-202ENST00000493075 A0A087WSZ3 146 aa6.02□□□□□ -1.45
LRTM1-202ENST00000493075 Q96NJ1 140 aa6.02□□□□□ -1.45
LRTM1-202ENST00000493075 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
LRTM1-202ENST00000493075 COX6CP09669 75 aa6□□□□□ -1.45
LRTM1-202ENST00000493075 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
LRTM1-202ENST00000493075 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
LRTM1-202ENST00000493075 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 TMEM256-PLSCR3K7ERE1 68 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 DNAL4O96015 105 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 PSMB2P49721 201 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 TRBV7-4A0A0J9YYF1 115 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 A8MUU9 505 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
LRTM1-202ENST00000493075 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
LRTM1-202ENST00000493075 PCP4L1A6NKN8 68 aa5.98□□□□□ -1.45
LRTM1-202ENST00000493075 UQCR10Q9UDW1 63 aa5.98□□□□□ -1.45
LRTM1-202ENST00000493075 K7ERJ3 54 aa5.97□□□□□ -1.45
LRTM1-202ENST00000493075 M0R2T5 61 aa5.97□□□□□ -1.45
LRTM1-202ENST00000493075 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms