RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 LINC00158P58513 81 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 MIR7-3HGQ8N6C7 128 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 Q8NDZ9 215 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 BCE1O60756 84 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 Q6JHZ5 121 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 HSPG2P98160 4391 aa5.94□□□□□ -1.46
CSTF1-206ENST00000493039 UBE2AP49459 152 aa5.93□□□□□ -1.46
CSTF1-206ENST00000493039 CXCL6P80162 114 aa5.93□□□□□ -1.46
CSTF1-206ENST00000493039 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
CSTF1-206ENST00000493039 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
CSTF1-206ENST00000493039 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
CSTF1-206ENST00000493039 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
CSTF1-206ENST00000493039 RYR1P21817 5038 aa5.92□□□□□ -1.46
CSTF1-206ENST00000493039 HAMPP81172 84 aa5.91□□□□□ -1.46
CSTF1-206ENST00000493039 F8WEM9 126 aa5.91□□□□□ -1.46
CSTF1-206ENST00000493039 CFC1BP0CG36 223 aa5.91□□□□□ -1.46
CSTF1-206ENST00000493039 CFC1P0CG37 223 aa5.91□□□□□ -1.46
CSTF1-206ENST00000493039 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
CSTF1-206ENST00000493039 A0A087WYN8 130 aa5.9□□□□□ -1.46
CSTF1-206ENST00000493039 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
CSTF1-206ENST00000493039 PSPHP1O15172 72 aa5.9□□□□□ -1.46
CSTF1-206ENST00000493039 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.47
CSTF1-206ENST00000493039 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.47
CSTF1-206ENST00000493039 TRIAP1O43715 76 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 SCXQ7RTU7 201 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 CLEC2BQ92478 149 aa5.89□□□□□ -1.47
CSTF1-206ENST00000493039 MUSTN1Q8IVN3 82 aa5.88□□□□□ -1.47
CSTF1-206ENST00000493039 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
CSTF1-206ENST00000493039 KRTAP3-2Q9BYR7 98 aa5.88□□□□□ -1.47
CSTF1-206ENST00000493039 PLA2G2DQ9UNK4 145 aa5.88□□□□□ -1.47
CSTF1-206ENST00000493039 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
CSTF1-206ENST00000493039 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
CSTF1-206ENST00000493039 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
CSTF1-206ENST00000493039 IGLV5-37A0A075B6J1 123 aa5.85□□□□□ -1.47
CSTF1-206ENST00000493039 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
CSTF1-206ENST00000493039 A0A087WVE0 104 aa5.85□□□□□ -1.47
CSTF1-206ENST00000493039 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
CSTF1-206ENST00000493039 C7orf33Q8WU49 177 aa5.83□□□□□ -1.48
CSTF1-206ENST00000493039 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
CSTF1-206ENST00000493039 CDK2AP2O75956 126 aa5.83□□□□□ -1.48
CSTF1-206ENST00000493039 LINC00167Q96N53 147 aa5.83□□□□□ -1.48
CSTF1-206ENST00000493039 NCR3O14931 201 aa5.82□□□□□ -1.48
CSTF1-206ENST00000493039 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
CSTF1-206ENST00000493039 A8MU10 97 aa5.82□□□□□ -1.48
CSTF1-206ENST00000493039 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
CSTF1-206ENST00000493039 RPL37AP8A6NKH3 93 aa5.81□□□□□ -1.48
CSTF1-206ENST00000493039 HERC2O95714 4834 aa5.81□□□□□ -1.48
CSTF1-206ENST00000493039 IGKV3D-7A0A0C4DH55 119 aa5.8□□□□□ -1.48
CSTF1-206ENST00000493039 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
CSTF1-206ENST00000493039 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
CSTF1-206ENST00000493039 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
CSTF1-206ENST00000493039 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
CSTF1-206ENST00000493039 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
CSTF1-206ENST00000493039 COX6CP09669 75 aa5.79□□□□□ -1.48
CSTF1-206ENST00000493039 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
CSTF1-206ENST00000493039 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
CSTF1-206ENST00000493039 RPL28P46779 137 aaKnown RBP5.78□□□□□ -1.48
CSTF1-206ENST00000493039 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
CSTF1-206ENST00000493039 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
CSTF1-206ENST00000493039 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
CSTF1-206ENST00000493039 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
CSTF1-206ENST00000493039 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
CSTF1-206ENST00000493039 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
CSTF1-206ENST00000493039 Q1RN00 199 aa5.76□□□□□ -1.49
CSTF1-206ENST00000493039 LINC00528Q8N1L1 170 aa5.76□□□□□ -1.49
CSTF1-206ENST00000493039 TRAV23DV6A0A075B6W5 121 aa5.76□□□□□ -1.49
CSTF1-206ENST00000493039 KRTAP4-16G5E9R7 235 aaPredicted RBP5.75□□□□□ -1.49
CSTF1-206ENST00000493039 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
CSTF1-206ENST00000493039 Q5VV11 94 aa5.75□□□□□ -1.49
CSTF1-206ENST00000493039 SPRR1AP35321 89 aa5.75□□□□□ -1.49
CSTF1-206ENST00000493039 BAALC-AS2P0C853 105 aa5.74□□□□□ -1.49
CSTF1-206ENST00000493039 REG3GQ6UW15 175 aa5.73□□□□□ -1.49
CSTF1-206ENST00000493039 SMIM11BQ8TCY0 68 aa5.73□□□□□ -1.49
CSTF1-206ENST00000493039 H7C2G1 150 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 Q8N1X5 172 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
CSTF1-206ENST00000493039 RPL37AP61513 92 aaKnown RBP5.71□□□□□ -1.49
CSTF1-206ENST00000493039 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.49
CSTF1-206ENST00000493039 TRBV7-4A0A0J9YYF1 115 aa5.71□□□□□ -1.5
CSTF1-206ENST00000493039 Q5VSD8 79 aa5.71□□□□□ -1.5
CSTF1-206ENST00000493039 LINC00846Q9NV44 126 aa5.71□□□□□ -1.5
CSTF1-206ENST00000493039 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
CSTF1-206ENST00000493039 DNAL4O96015 105 aa5.7□□□□□ -1.5
CSTF1-206ENST00000493039 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
CSTF1-206ENST00000493039 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
CSTF1-206ENST00000493039 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
CSTF1-206ENST00000493039 PRLHP81277 87 aa5.7□□□□□ -1.5
CSTF1-206ENST00000493039 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
CSTF1-206ENST00000493039 Q9BRP9 147 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms