RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 TRAV13-2A0A0B4J235 113 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 TCL1BO95988 128 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 KRTDAPP60985 99 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 SNRPEP62304 92 aaKnown RBP2.82□□□□□ -1.96
SEC13-219ENST00000492602 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 YPEL4Q96NS1 127 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 Q9BRP9 147 aa2.82□□□□□ -1.96
SEC13-219ENST00000492602 A0A1B0GWB2 263 aa2.81□□□□□ -1.96
SEC13-219ENST00000492602 COLCA2A8K830 154 aa2.81□□□□□ -1.96
SEC13-219ENST00000492602 CD164Q04900 197 aa2.81□□□□□ -1.96
SEC13-219ENST00000492602 ADAMTSL4-AS1Q5T5F5 129 aa2.81□□□□□ -1.96
SEC13-219ENST00000492602 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
SEC13-219ENST00000492602 ERC2-IT1O76042 136 aa2.8□□□□□ -1.96
SEC13-219ENST00000492602 TSPEAR-AS2P59090 65 aa2.8□□□□□ -1.96
SEC13-219ENST00000492602 C6orf99Q4VX62 202 aa2.8□□□□□ -1.96
SEC13-219ENST00000492602 SLC7A5P1Q8MH63 180 aa2.8□□□□□ -1.96
SEC13-219ENST00000492602 KRTAP3-1Q9BYR8 98 aa2.8□□□□□ -1.96
SEC13-219ENST00000492602 S100A2P29034 98 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 ELOF1P60002 83 aaKnown RBP2.79□□□□□ -1.96
SEC13-219ENST00000492602 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 LINC01545Q5VT33 79 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 C12orf57Q99622 126 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BKO60814 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 S100A6P06703 90 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BJP06899 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BOP23527 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BBP33778 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BDP58876 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BCP62807 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST2H2BEQ16778 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 Q1RN00 199 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.78□□□□□ -1.96
SEC13-219ENST00000492602 ST20-AS1Q8NBB2 130 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BHQ93079 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BNQ99877 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 HIST1H2BMQ99879 126 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 SNHG12Q9BXW3 62 aa2.78□□□□□ -1.96
SEC13-219ENST00000492602 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
SEC13-219ENST00000492602 C3orf79P0CE67 100 aa2.77□□□□□ -1.97
SEC13-219ENST00000492602 SPRR1BP22528 89 aa2.77□□□□□ -1.97
SEC13-219ENST00000492602 Q6JHZ5 121 aa2.77□□□□□ -1.97
SEC13-219ENST00000492602 MUSTN1Q8IVN3 82 aa2.77□□□□□ -1.97
SEC13-219ENST00000492602 hADV29S1A0JD25 119 aa2.76□□□□□ -1.97
SEC13-219ENST00000492602 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
SEC13-219ENST00000492602 BVES-AS1Q5T3Y7 98 aa2.76□□□□□ -1.97
SEC13-219ENST00000492602 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
SEC13-219ENST00000492602 ATP11AUNQ6ZP68 121 aa2.76□□□□□ -1.97
SEC13-219ENST00000492602 S100A1P23297 94 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 RPL37P61927 97 aaKnown RBP2.75□□□□□ -1.97
SEC13-219ENST00000492602 OCIAD2Q56VL3 154 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 Q5XG85 94 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 HIST1H4GQ99525 98 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 LITAFQ99732 161 aa2.75□□□□□ -1.97
SEC13-219ENST00000492602 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
SEC13-219ENST00000492602 PCP2Q8IVA1 136 aa2.74□□□□□ -1.97
SEC13-219ENST00000492602 SMIM11BQ8TCY0 68 aa2.74□□□□□ -1.97
SEC13-219ENST00000492602 RAB37Q96AX2 223 aa2.74□□□□□ -1.97
SEC13-219ENST00000492602 H0YGX0 51 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 H3BQ85 93 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 LST1O00453 97 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.73□□□□□ -1.97
SEC13-219ENST00000492602 LINC00575Q6W349 94 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 ATOH7Q8N100 152 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 SS18L2Q9UHA2 77 aa2.73□□□□□ -1.97
SEC13-219ENST00000492602 IGLV5-48A0A075B6I7 105 aa2.72□□□□□ -1.97
SEC13-219ENST00000492602 TRBV20-1A0A075B6N2 111 aa2.72□□□□□ -1.97
SEC13-219ENST00000492602 C1orf195Q5TG92 126 aa2.72□□□□□ -1.97
SEC13-219ENST00000492602 SMIM29Q86T20 159 aa2.72□□□□□ -1.97
SEC13-219ENST00000492602 TTTY13Q9BZ97 58 aa2.72□□□□□ -1.97
SEC13-219ENST00000492602 Q6ZQY7 126 aa2.71□□□□□ -1.98
SEC13-219ENST00000492602 CLEC2BQ92478 149 aa2.71□□□□□ -1.98
SEC13-219ENST00000492602 A0A0G2JQZ4 141 aa2.7□□□□□ -1.98
SEC13-219ENST00000492602 COX6CP09669 75 aa2.7□□□□□ -1.98
SEC13-219ENST00000492602 TRBV7-7A0A0K0K1E9 115 aa2.69□□□□□ -1.98
SEC13-219ENST00000492602 DNAL4O96015 105 aa2.69□□□□□ -1.98
SEC13-219ENST00000492602 FABP2P12104 132 aa2.69□□□□□ -1.98
SEC13-219ENST00000492602 TEN1Q86WV5 123 aa2.69□□□□□ -1.98
SEC13-219ENST00000492602 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
SEC13-219ENST00000492602 SPRR2EP22531 72 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 SPRR2BP35325 72 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 SPRR2AP35326 72 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 Q96NJ1 140 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 HIST1H2BLQ99880 126 aa2.68□□□□□ -1.98
SEC13-219ENST00000492602 A0A1B0GX51 115 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 A6NN06 94 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 H3BMG7 143 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 DLEU1O43261 78 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 COX8AP10176 69 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 PSMB2P49721 201 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 NDUFV3P56181 108 aaKnown RBP2.67□□□□□ -1.98
SEC13-219ENST00000492602 Q75L30 129 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
SEC13-219ENST00000492602 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
SEC13-219ENST00000492602 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
SEC13-219ENST00000492602 IGFL1Q6UW32 110 aa2.66□□□□□ -1.98
SEC13-219ENST00000492602 MTURNQ8N3F0 131 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms