RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
TNFRSF1B-203ENST00000492361 DSCR10P59022 87 aa9.6□□□□□ -0.87
TNFRSF1B-203ENST00000492361 SMIM26A0A096LP01 95 aa9.6□□□□□ -0.87
TNFRSF1B-203ENST00000492361 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
TNFRSF1B-203ENST00000492361 PSPHP1O15172 72 aa9.59□□□□□ -0.87
TNFRSF1B-203ENST00000492361 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
TNFRSF1B-203ENST00000492361 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
TNFRSF1B-203ENST00000492361 C16orf90A8MZG2 172 aa9.58□□□□□ -0.88
TNFRSF1B-203ENST00000492361 NDUFC1O43677 76 aa9.58□□□□□ -0.88
TNFRSF1B-203ENST00000492361 MP68P56378 58 aa9.58□□□□□ -0.88
TNFRSF1B-203ENST00000492361 MDFIQ99750 246 aa9.58□□□□□ -0.88
TNFRSF1B-203ENST00000492361 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
TNFRSF1B-203ENST00000492361 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
TNFRSF1B-203ENST00000492361 F8WDY8 70 aa9.55□□□□□ -0.88
TNFRSF1B-203ENST00000492361 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF1B-203ENST00000492361 PCOTHQ58A44 107 aa9.55□□□□□ -0.88
TNFRSF1B-203ENST00000492361 PANO1I0J062 215 aa9.54□□□□□ -0.88
TNFRSF1B-203ENST00000492361 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
TNFRSF1B-203ENST00000492361 FP248Q71RG6 208 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF1B-203ENST00000492361 BCE1O60756 84 aa9.52□□□□□ -0.89
TNFRSF1B-203ENST00000492361 SPRR1AP35321 89 aa9.52□□□□□ -0.89
TNFRSF1B-203ENST00000492361 CDK2AP2O75956 126 aa9.51□□□□□ -0.89
TNFRSF1B-203ENST00000492361 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
TNFRSF1B-203ENST00000492361 C14orf177Q52M58 125 aa9.49□□□□□ -0.89
TNFRSF1B-203ENST00000492361 PLA2G2DQ9UNK4 145 aa9.49□□□□□ -0.89
TNFRSF1B-203ENST00000492361 H0Y9P7 68 aa9.48□□□□□ -0.89
TNFRSF1B-203ENST00000492361 NDUFB1O75438 58 aa9.48□□□□□ -0.89
TNFRSF1B-203ENST00000492361 TNP2Q05952 138 aa9.47□□□□□ -0.89
TNFRSF1B-203ENST00000492361 NBDYA0A0U1RRE5 68 aa9.47□□□□□ -0.89
TNFRSF1B-203ENST00000492361 C1orf64Q8NEQ6 169 aa9.47□□□□□ -0.89
TNFRSF1B-203ENST00000492361 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.89
TNFRSF1B-203ENST00000492361 MOBPQ13875 183 aa9.46□□□□□ -0.9
TNFRSF1B-203ENST00000492361 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
TNFRSF1B-203ENST00000492361 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
TNFRSF1B-203ENST00000492361 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
TNFRSF1B-203ENST00000492361 LY6G6CO95867 125 aa9.45□□□□□ -0.9
TNFRSF1B-203ENST00000492361 SPRR4Q96PI1 79 aa9.45□□□□□ -0.9
TNFRSF1B-203ENST00000492361 DNAH10Q8IVF4 4471 aa9.44□□□□□ -0.9
TNFRSF1B-203ENST00000492361 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
TNFRSF1B-203ENST00000492361 LYSTQ99698 3801 aa9.42□□□□□ -0.9
TNFRSF1B-203ENST00000492361 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
TNFRSF1B-203ENST00000492361 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1B-203ENST00000492361 FBN3Q75N90 2809 aa9.4□□□□□ -0.91
TNFRSF1B-203ENST00000492361 CNBPP62633 177 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1B-203ENST00000492361 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
TNFRSF1B-203ENST00000492361 hDV103S1A0JD37 113 aa9.35□□□□□ -0.91
TNFRSF1B-203ENST00000492361 RTL8CO15255 209 aa9.34□□□□□ -0.91
TNFRSF1B-203ENST00000492361 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
TNFRSF1B-203ENST00000492361 A8MUN3 132 aa9.34□□□□□ -0.91
TNFRSF1B-203ENST00000492361 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
TNFRSF1B-203ENST00000492361 NUPR2A6NF83 97 aa9.33□□□□□ -0.92
TNFRSF1B-203ENST00000492361 A8MWP4 228 aa9.33□□□□□ -0.92
TNFRSF1B-203ENST00000492361 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
TNFRSF1B-203ENST00000492361 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
TNFRSF1B-203ENST00000492361 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1B-203ENST00000492361 A0A1B0GW54 56 aa9.3□□□□□ -0.92
TNFRSF1B-203ENST00000492361 CHKB-CPT1BH3BT56 60 aa9.3□□□□□ -0.92
TNFRSF1B-203ENST00000492361 A0A087WTM6 91 aa9.29□□□□□ -0.92
TNFRSF1B-203ENST00000492361 PRR15LQ9BU68 103 aa9.29□□□□□ -0.92
TNFRSF1B-203ENST00000492361 TRAV22A0A0B4J277 110 aa9.28□□□□□ -0.92
TNFRSF1B-203ENST00000492361 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
TNFRSF1B-203ENST00000492361 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
TNFRSF1B-203ENST00000492361 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
TNFRSF1B-203ENST00000492361 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
TNFRSF1B-203ENST00000492361 A0A087X002 238 aa9.22□□□□□ -0.93
TNFRSF1B-203ENST00000492361 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
TNFRSF1B-203ENST00000492361 C1orf195Q5TG92 126 aa9.21□□□□□ -0.93
TNFRSF1B-203ENST00000492361 A6NED7 52 aa9.2□□□□□ -0.94
TNFRSF1B-203ENST00000492361 A8MU10 97 aa9.2□□□□□ -0.94
TNFRSF1B-203ENST00000492361 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
TNFRSF1B-203ENST00000492361 MMP24-AS1A0A0U1RRL7 71 aa9.19□□□□□ -0.94
TNFRSF1B-203ENST00000492361 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
TNFRSF1B-203ENST00000492361 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1B-203ENST00000492361 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF1B-203ENST00000492361 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
TNFRSF1B-203ENST00000492361 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
TNFRSF1B-203ENST00000492361 COA5Q86WW8 74 aa9.16□□□□□ -0.94
TNFRSF1B-203ENST00000492361 ZNF861PO60384 105 aa9.15□□□□□ -0.94
TNFRSF1B-203ENST00000492361 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1B-203ENST00000492361 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
TNFRSF1B-203ENST00000492361 A0A1B0GVX0 72 aa9.12□□□□□ -0.95
TNFRSF1B-203ENST00000492361 PMAIP1Q13794 54 aa9.12□□□□□ -0.95
TNFRSF1B-203ENST00000492361 SPRR1BP22528 89 aa9.11□□□□□ -0.95
TNFRSF1B-203ENST00000492361 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
TNFRSF1B-203ENST00000492361 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1B-203ENST00000492361 CD164Q04900 197 aa9.1□□□□□ -0.95
TNFRSF1B-203ENST00000492361 WWC2-AS2Q96NR7 200 aa9.09□□□□□ -0.95
TNFRSF1B-203ENST00000492361 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1B-203ENST00000492361 PRR26Q8N8Z3 221 aa9.08□□□□□ -0.96
TNFRSF1B-203ENST00000492361 LCE6AA0A183 80 aa9.07□□□□□ -0.96
TNFRSF1B-203ENST00000492361 DNAH7Q8WXX0 4024 aa9.07□□□□□ -0.96
TNFRSF1B-203ENST00000492361 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
TNFRSF1B-203ENST00000492361 IGKV2D-30A0A075B6S6 120 aa9.06□□□□□ -0.96
TNFRSF1B-203ENST00000492361 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
TNFRSF1B-203ENST00000492361 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
TNFRSF1B-203ENST00000492361 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
TNFRSF1B-203ENST00000492361 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
TNFRSF1B-203ENST00000492361 SPINK1P00995 79 aa9.03□□□□□ -0.96
TNFRSF1B-203ENST00000492361 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
TNFRSF1B-203ENST00000492361 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms