RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 C1orf134Q5TEV5 83 aa7.56□□□□□ -1.2
SRGAP3-210ENST00000491467 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
SRGAP3-210ENST00000491467 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
SRGAP3-210ENST00000491467 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-210ENST00000491467 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 H0Y9J4 135 aa7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 Q6ZR54 194 aa7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 Q8N377 158 aa7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 Q9BRP9 147 aa7.53□□□□□ -1.2
SRGAP3-210ENST00000491467 IGKV2-24A0A0C4DH68 120 aa7.52□□□□□ -1.21
SRGAP3-210ENST00000491467 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
SRGAP3-210ENST00000491467 UBE2BP63146 152 aa7.51□□□□□ -1.21
SRGAP3-210ENST00000491467 A0A087WTM6 91 aa7.5□□□□□ -1.21
SRGAP3-210ENST00000491467 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
SRGAP3-210ENST00000491467 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
SRGAP3-210ENST00000491467 CXCL6P80162 114 aa7.48□□□□□ -1.21
SRGAP3-210ENST00000491467 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
SRGAP3-210ENST00000491467 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
SRGAP3-210ENST00000491467 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
SRGAP3-210ENST00000491467 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
SRGAP3-210ENST00000491467 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
SRGAP3-210ENST00000491467 HIST1H4AP62805 103 aaKnown RBP7.47□□□□□ -1.21
SRGAP3-210ENST00000491467 Q6ZVQ6 151 aa7.47□□□□□ -1.21
SRGAP3-210ENST00000491467 LRP2P98164 4655 aa7.46□□□□□ -1.21
SRGAP3-210ENST00000491467 ATOX1O00244 68 aa7.46□□□□□ -1.22
SRGAP3-210ENST00000491467 MUC2Q02817 5179 aa7.46□□□□□ -1.22
SRGAP3-210ENST00000491467 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
SRGAP3-210ENST00000491467 BCE1O60756 84 aa7.45□□□□□ -1.22
SRGAP3-210ENST00000491467 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
SRGAP3-210ENST00000491467 F8WEM9 126 aa7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 ERC2-IT1O76042 136 aa7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 CHTF8P0CG12 524 aa7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 PHF5AQ7RTV0 110 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
SRGAP3-210ENST00000491467 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
SRGAP3-210ENST00000491467 SPRR1BP22528 89 aa7.43□□□□□ -1.22
SRGAP3-210ENST00000491467 C1orf137Q5JT78 98 aa7.43□□□□□ -1.22
SRGAP3-210ENST00000491467 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
SRGAP3-210ENST00000491467 HAMPP81172 84 aa7.42□□□□□ -1.22
SRGAP3-210ENST00000491467 SPRR4Q96PI1 79 aa7.42□□□□□ -1.22
SRGAP3-210ENST00000491467 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
SRGAP3-210ENST00000491467 NREPQ16612 68 aa7.41□□□□□ -1.22
SRGAP3-210ENST00000491467 SMIM29Q86T20 159 aa7.41□□□□□ -1.22
SRGAP3-210ENST00000491467 UBE2AP49459 152 aa7.4□□□□□ -1.22
SRGAP3-210ENST00000491467 Q8NBF4 154 aa7.4□□□□□ -1.22
SRGAP3-210ENST00000491467 HIGD2AQ9BW72 106 aa7.4□□□□□ -1.22
SRGAP3-210ENST00000491467 UQCRQO14949 82 aa7.39□□□□□ -1.23
SRGAP3-210ENST00000491467 PRLHP81277 87 aa7.39□□□□□ -1.23
SRGAP3-210ENST00000491467 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
SRGAP3-210ENST00000491467 SMIM20Q8N5G0 67 aa7.38□□□□□ -1.23
SRGAP3-210ENST00000491467 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
SRGAP3-210ENST00000491467 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 CRYGAP11844 174 aa7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 KRTAP13-1Q8IUC0 172 aa7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 C3orf22Q8N5N4 141 aa7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-210ENST00000491467 COX7CP15954 63 aa7.36□□□□□ -1.23
SRGAP3-210ENST00000491467 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
SRGAP3-210ENST00000491467 PANO1I0J062 215 aa7.35□□□□□ -1.23
SRGAP3-210ENST00000491467 SERP2Q8N6R1 65 aa7.35□□□□□ -1.23
SRGAP3-210ENST00000491467 A0A087WVE0 104 aa7.34□□□□□ -1.23
SRGAP3-210ENST00000491467 BPY2O14599 106 aa7.34□□□□□ -1.23
SRGAP3-210ENST00000491467 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-210ENST00000491467 PKHD1L1Q86WI1 4243 aa7.34□□□□□ -1.23
SRGAP3-210ENST00000491467 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
SRGAP3-210ENST00000491467 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-210ENST00000491467 IGFL1Q6UW32 110 aa7.32□□□□□ -1.24
SRGAP3-210ENST00000491467 FAT3Q8TDW7 4589 aa7.31□□□□□ -1.24
SRGAP3-210ENST00000491467 OXTP01178 125 aa7.29□□□□□ -1.24
SRGAP3-210ENST00000491467 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
SRGAP3-210ENST00000491467 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
SRGAP3-210ENST00000491467 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
SRGAP3-210ENST00000491467 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
SRGAP3-210ENST00000491467 ZNF861PO60384 105 aa7.27□□□□□ -1.25
SRGAP3-210ENST00000491467 IGKV4-1P06312 121 aa7.27□□□□□ -1.25
SRGAP3-210ENST00000491467 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
SRGAP3-210ENST00000491467 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-210ENST00000491467 SCXQ7RTU7 201 aa7.25□□□□□ -1.25
SRGAP3-210ENST00000491467 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
SRGAP3-210ENST00000491467 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
SRGAP3-210ENST00000491467 KRTAP10-1P60331 282 aa7.22□□□□□ -1.25
SRGAP3-210ENST00000491467 A0A087WSZ3 146 aa7.21□□□□□ -1.26
SRGAP3-210ENST00000491467 Q6ZSA8 131 aa7.21□□□□□ -1.26
SRGAP3-210ENST00000491467 J3KT08 172 aa7.2□□□□□ -1.26
SRGAP3-210ENST00000491467 DSCR10P59022 87 aa7.2□□□□□ -1.26
SRGAP3-210ENST00000491467 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
SRGAP3-210ENST00000491467 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
SRGAP3-210ENST00000491467 Q8N9L7 120 aa7.16□□□□□ -1.26
SRGAP3-210ENST00000491467 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
SRGAP3-210ENST00000491467 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
SRGAP3-210ENST00000491467 A0A0G2JQZ4 141 aa7.15□□□□□ -1.26
SRGAP3-210ENST00000491467 TMEM258P61165 79 aa7.15□□□□□ -1.26
SRGAP3-210ENST00000491467 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
SRGAP3-210ENST00000491467 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.26
SRGAP3-210ENST00000491467 NDUFC1O43677 76 aa7.14□□□□□ -1.27
SRGAP3-210ENST00000491467 CD164Q04900 197 aa7.14□□□□□ -1.27
SRGAP3-210ENST00000491467 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms