RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ANAPC11Q9NYG5 84 aa13□□□□□ -0.33
VCPKMT-204ENST00000491402 PPDPFLQ8WWR9 84 aa12.99□□□□□ -0.33
VCPKMT-204ENST00000491402 BAALC-AS2P0C853 105 aa12.99□□□□□ -0.33
VCPKMT-204ENST00000491402 MYCBP2O75592 4640 aa12.98□□□□□ -0.33
VCPKMT-204ENST00000491402 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
VCPKMT-204ENST00000491402 H3BQ85 93 aa12.97□□□□□ -0.33
VCPKMT-204ENST00000491402 C3orf22Q8N5N4 141 aa12.97□□□□□ -0.33
VCPKMT-204ENST00000491402 SMIM29Q86T20 159 aa12.96□□□□□ -0.34
VCPKMT-204ENST00000491402 H3BT86 120 aa12.94□□□□□ -0.34
VCPKMT-204ENST00000491402 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
VCPKMT-204ENST00000491402 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
VCPKMT-204ENST00000491402 FAM229BQ4G0N7 80 aa12.92□□□□□ -0.34
VCPKMT-204ENST00000491402 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
VCPKMT-204ENST00000491402 A0A087X002 238 aa12.91□□□□□ -0.34
VCPKMT-204ENST00000491402 SMCPP49901 116 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-204ENST00000491402 ANKRD29Q8N6D5 301 aa12.91□□□□□ -0.34
VCPKMT-204ENST00000491402 LAMTOR3Q9UHA4 124 aa12.91□□□□□ -0.34
VCPKMT-204ENST00000491402 NDUFV3P56181 108 aaKnown RBP12.9□□□□□ -0.34
VCPKMT-204ENST00000491402 IGLV9-49A0A0B4J1Y8 123 aa12.88□□□□□ -0.35
VCPKMT-204ENST00000491402 F8W1H4 67 aa12.88□□□□□ -0.35
VCPKMT-204ENST00000491402 CRYGAP11844 174 aa12.88□□□□□ -0.35
VCPKMT-204ENST00000491402 LINC01600Q96MT4 127 aa12.86□□□□□ -0.35
VCPKMT-204ENST00000491402 F8WEM9 126 aa12.86□□□□□ -0.35
VCPKMT-204ENST00000491402 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
VCPKMT-204ENST00000491402 KRTAP13-2Q52LG2 175 aa12.85□□□□□ -0.35
VCPKMT-204ENST00000491402 A0A1B0GV72 72 aa12.84□□□□□ -0.35
VCPKMT-204ENST00000491402 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
VCPKMT-204ENST00000491402 PRR26Q8N8Z3 221 aa12.84□□□□□ -0.35
VCPKMT-204ENST00000491402 MOBPQ13875 183 aa12.83□□□□□ -0.36
VCPKMT-204ENST00000491402 OXTP01178 125 aa12.81□□□□□ -0.36
VCPKMT-204ENST00000491402 KRTAP29-1A8MX34 341 aaPredicted RBP12.81□□□□□ -0.36
VCPKMT-204ENST00000491402 IGLV8-61A0A075B6I0 122 aa12.8□□□□□ -0.36
VCPKMT-204ENST00000491402 Q8NBF4 154 aa12.8□□□□□ -0.36
VCPKMT-204ENST00000491402 JMJD7-PLA2G4BH0Y9G9 81 aa12.78□□□□□ -0.36
VCPKMT-204ENST00000491402 RBM3P98179 157 aaKnown RBP12.77□□□□□ -0.36
VCPKMT-204ENST00000491402 OBSCN-AS1Q96MR7 158 aa12.77□□□□□ -0.36
VCPKMT-204ENST00000491402 TYMSOSQ8TAI1 123 aa12.76□□□□□ -0.37
VCPKMT-204ENST00000491402 DMBT1Q9UGM3 2413 aaPredicted RBP12.76□□□□□ -0.37
VCPKMT-204ENST00000491402 J3QL48 77 aa12.74□□□□□ -0.37
VCPKMT-204ENST00000491402 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
VCPKMT-204ENST00000491402 SSBP3-AS1Q7Z2R9 100 aa12.74□□□□□ -0.37
VCPKMT-204ENST00000491402 TEN1Q86WV5 123 aa12.74□□□□□ -0.37
VCPKMT-204ENST00000491402 A0A0G2JQZ4 141 aa12.73□□□□□ -0.37
VCPKMT-204ENST00000491402 Q6JHZ5 121 aa12.73□□□□□ -0.37
VCPKMT-204ENST00000491402 IGFL1Q6UW32 110 aa12.73□□□□□ -0.37
VCPKMT-204ENST00000491402 DSCR8Q96T75 97 aa12.73□□□□□ -0.37
VCPKMT-204ENST00000491402 TRBV7-4A0A0J9YYF1 115 aa12.71□□□□□ -0.37
VCPKMT-204ENST00000491402 MT1HL1P0DM35 61 aa12.71□□□□□ -0.37
VCPKMT-204ENST00000491402 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.37
VCPKMT-204ENST00000491402 KRTAP10-8P60410 259 aa12.69□□□□□ -0.38
VCPKMT-204ENST00000491402 TNXBP22105 4242 aa12.68□□□□□ -0.38
VCPKMT-204ENST00000491402 LOC110117498A0A087WWA1 95 aa12.66□□□□□ -0.38
VCPKMT-204ENST00000491402 Q6ZQT0 140 aa12.64□□□□□ -0.39
VCPKMT-204ENST00000491402 CCKP06307 115 aa12.63□□□□□ -0.39
VCPKMT-204ENST00000491402 PDE6GP18545 87 aa12.63□□□□□ -0.39
VCPKMT-204ENST00000491402 A0A1W2PNM2 257 aa12.62□□□□□ -0.39
VCPKMT-204ENST00000491402 LINC00304Q8N9R0 145 aa12.62□□□□□ -0.39
VCPKMT-204ENST00000491402 HRCT1Q6UXD1 115 aa12.61□□□□□ -0.39
VCPKMT-204ENST00000491402 VPS25Q9BRG1 176 aa12.6□□□□□ -0.39
VCPKMT-204ENST00000491402 CD164Q04900 197 aa12.59□□□□□ -0.39
VCPKMT-204ENST00000491402 Q6Q795 121 aa12.58□□□□□ -0.39
VCPKMT-204ENST00000491402 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
VCPKMT-204ENST00000491402 SPAG11AQ6PDA7 123 aa12.56□□□□□ -0.4
VCPKMT-204ENST00000491402 HERC1Q15751 4861 aa12.56□□□□□ -0.4
VCPKMT-204ENST00000491402 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
VCPKMT-204ENST00000491402 SPINK1P00995 79 aa12.54□□□□□ -0.4
VCPKMT-204ENST00000491402 C21orf62-AS1Q17RA5 79 aa12.54□□□□□ -0.4
VCPKMT-204ENST00000491402 A0A087WSZ3 146 aa12.5□□□□□ -0.41
VCPKMT-204ENST00000491402 RPS29P62273 56 aaKnown RBP12.48□□□□□ -0.41
VCPKMT-204ENST00000491402 A0A1B0GW54 56 aa12.47□□□□□ -0.41
VCPKMT-204ENST00000491402 LIMD2Q9BT23 127 aa12.45□□□□□ -0.42
VCPKMT-204ENST00000491402 Q5XG85 94 aa12.43□□□□□ -0.42
VCPKMT-204ENST00000491402 SS18L2Q9UHA2 77 aa12.42□□□□□ -0.42
VCPKMT-204ENST00000491402 FAM240AA0A1B0GVK7 77 aa12.38□□□□□ -0.43
VCPKMT-204ENST00000491402 J3QR89 54 aa12.38□□□□□ -0.43
VCPKMT-204ENST00000491402 LINC00846Q9NV44 126 aa12.38□□□□□ -0.43
VCPKMT-204ENST00000491402 ASB16-AS1Q495Z4 193 aa12.36□□□□□ -0.43
VCPKMT-204ENST00000491402 ACYP1P07311 99 aa12.35□□□□□ -0.43
VCPKMT-204ENST00000491402 NREPQ16612 68 aa12.32□□□□□ -0.44
VCPKMT-204ENST00000491402 Q96NJ1 140 aa12.31□□□□□ -0.44
VCPKMT-204ENST00000491402 RETNLBQ9BQ08 111 aa12.31□□□□□ -0.44
VCPKMT-204ENST00000491402 C1orf195Q5TG92 126 aa12.3□□□□□ -0.44
VCPKMT-204ENST00000491402 Q6ZVQ6 151 aa12.3□□□□□ -0.44
VCPKMT-204ENST00000491402 UBL5Q9BZL1 73 aa12.3□□□□□ -0.44
VCPKMT-204ENST00000491402 K7ERU9 68 aa12.29□□□□□ -0.44
VCPKMT-204ENST00000491402 LINC00472Q9H8W2 130 aa12.29□□□□□ -0.44
VCPKMT-204ENST00000491402 DEFB116Q30KQ4 102 aa12.26□□□□□ -0.45
VCPKMT-204ENST00000491402 IGKV4-1P06312 121 aa12.21□□□□□ -0.45
VCPKMT-204ENST00000491402 HMCN2Q8NDA2 5059 aa12.21□□□□□ -0.45
VCPKMT-204ENST00000491402 SIGMAR1Q99720 223 aa12.18□□□□□ -0.46
VCPKMT-204ENST00000491402 J3KT08 172 aa12.18□□□□□ -0.46
VCPKMT-204ENST00000491402 BPY2O14599 106 aa12.17□□□□□ -0.46
VCPKMT-204ENST00000491402 FP248Q71RG6 208 aaPredicted RBP12.17□□□□□ -0.46
VCPKMT-204ENST00000491402 PRR4Q16378 134 aa12.16□□□□□ -0.46
VCPKMT-204ENST00000491402 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
VCPKMT-204ENST00000491402 DSCR10P59022 87 aa12.12□□□□□ -0.47
VCPKMT-204ENST00000491402 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
VCPKMT-204ENST00000491402 A8MWP4 228 aa12.1□□□□□ -0.47
VCPKMT-204ENST00000491402 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
VCPKMT-204ENST00000491402 CXCL6P80162 114 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms