RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ZNF815P	A8K554	130 aa		9.52	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	TRAV13-2	A0A0B4J235	113 aa		9.51	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	SLC7A5P1	Q8MH63	180 aa		9.5	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	SNAPIN	O95295	136 aa		9.49	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	APOC3	P02656	99 aa		9.49	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	LINC00310	P59036	64 aa		9.49	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	OCIAD2	Q56VL3	154 aa		9.49	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	COPS9	Q8WXC6	57 aa		9.49	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	YPEL4	Q96NS1	127 aa		9.48	□□□□□ -0.89
CDK5RAP2-218	ENST00000491334	SVBP	Q8N300	66 aa		9.45	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	MPLKIP	Q8TAP9	179 aa		9.45	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	SMIM11B	Q8TCY0	68 aa		9.44	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	TRGC2	P03986	189 aa		9.43	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	IFITM1	P13164	125 aa		9.43	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	VAMP3	Q15836	100 aa		9.43	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	KRTAP16-1	A8MUX0	517 aa		9.42	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	NDUFA5	Q16718	116 aa		9.42	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	SS18L2	Q9UHA2	77 aa		9.42	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	HRES1	P13985	223 aa		9.41	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	LINC00575	Q6W349	94 aa		9.41	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334		Q6ZQY7	126 aa		9.41	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	TTTY13	Q9BZ97	58 aa		9.41	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	SCGB1D4	Q6XE38	83 aa		9.4	□□□□□ -0.9
CDK5RAP2-218	ENST00000491334	hADV29S1	A0JD25	119 aa		9.39	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334		Q6ZVH6	145 aa		9.38	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	NEB	P20929	6669 aa		9.37	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	SYS1-DBNDD2	H3BUS1	97 aa		9.37	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	SCGB1D1	O95968	90 aa		9.36	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	DSCR10	P59022	87 aa		9.36	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	MUSTN1	Q8IVN3	82 aa		9.36	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	MTURN	Q8N3F0	131 aa		9.36	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	SNHG12	Q9BXW3	62 aa		9.36	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	NOTCH2NL	Q7Z3S9	236 aa		9.34	□□□□□ -0.91
CDK5RAP2-218	ENST00000491334	ANKRD39	Q53RE8	183 aa		9.33	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	LINC01545	Q5VT33	79 aa		9.32	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	PPDPFL	Q8WWR9	84 aa		9.32	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334		H3BUT2	72 aa		9.31	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	9.31	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	LINC00313	P59037	77 aa		9.3	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	KRTAP20-1	Q3LI63	56 aa		9.29	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334		A8MWP4	228 aa		9.28	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	PET117	Q6UWS5	81 aa		9.28	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334	TEN1	Q86WV5	123 aa		9.28	□□□□□ -0.92
CDK5RAP2-218	ENST00000491334		A0A087WSZ3	146 aa		9.24	□□□□□ -0.93
CDK5RAP2-218	ENST00000491334		Q8N9P0	234 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP2-218	ENST00000491334	COLCA2	A8K830	154 aa		9.23	□□□□□ -0.93
CDK5RAP2-218	ENST00000491334	SIGMAR1	Q99720	223 aa		9.22	□□□□□ -0.93
CDK5RAP2-218	ENST00000491334	C12orf57	Q99622	126 aa		9.16	□□□□□ -0.94
CDK5RAP2-218	ENST00000491334	MUC12	Q9UKN1	5478 aa		9.15	□□□□□ -0.94
CDK5RAP2-218	ENST00000491334	BVES-AS1	Q5T3Y7	98 aa		9.15	□□□□□ -0.94
CDK5RAP2-218	ENST00000491334	IGKV4-1	P06312	121 aa		9.14	□□□□□ -0.95
CDK5RAP2-218	ENST00000491334	C3orf79	P0CE67	100 aa		9.14	□□□□□ -0.95
CDK5RAP2-218	ENST00000491334	NDUFV3	P56181	108 aa	Known RBP	9.12	□□□□□ -0.95
CDK5RAP2-218	ENST00000491334	SNCG	O76070	127 aa		9.09	□□□□□ -0.95
CDK5RAP2-218	ENST00000491334	SPINK7	P58062	85 aa		9.09	□□□□□ -0.95
CDK5RAP2-218	ENST00000491334	KRTDAP	P60985	99 aa		9.08	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334		H3BMG7	143 aa		9.06	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	IGHV6-1	A0A0B4J1U7	121 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BK	O60814	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BJ	P06899	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BO	P23527	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BB	P33778	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BD	P58876	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BC	P62807	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST2H2BE	Q16778	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	ATOH7	Q8N100	152 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BH	Q93079	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BN	Q99877	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334	HIST1H2BM	Q99879	126 aa		9.04	□□□□□ -0.96
CDK5RAP2-218	ENST00000491334		A0A1W2PNM2	257 aa		9.02	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	GHRH	P01286	108 aa		9.02	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	ZCCHC13	Q8WW36	166 aa	Known RBP	9.02	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334		A6NN06	94 aa		9	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	DEFB116	Q30KQ4	102 aa		9	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	SNRPE	P62304	92 aa	Known RBP	8.97	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	WFDC13	Q8IUB5	93 aa		8.97	□□□□□ -0.97
CDK5RAP2-218	ENST00000491334	TRBV7-4	A0A0J9YYF1	115 aa		8.96	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	FABP2	P12104	132 aa		8.96	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	LINC00472	Q9H8W2	130 aa		8.96	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	C8orf87	E5RJ46	101 aa		8.95	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334		H0YGX0	51 aa		8.95	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	FAM218A	Q96MZ4	157 aa		8.93	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	ANKRD29	Q8N6D5	301 aa		8.92	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	RAB37	Q96AX2	223 aa		8.92	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334	KRTAP5-9	P26371	169 aa		8.91	□□□□□ -0.98
CDK5RAP2-218	ENST00000491334		A0A1B0GVX0	72 aa		8.89	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	KRTAP2-3	P0C7H8	128 aa		8.89	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	KRTAP2-4	Q9BYR9	128 aa		8.89	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	HIST1H4G	Q99525	98 aa		8.87	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	H1FX-AS1	Q4G0G2	97 aa		8.86	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	COA6	Q5JTJ3	125 aa	Known RBP	8.85	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	MDN1	Q9NU22	5596 aa		8.85	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334		A0A1B0GX51	115 aa		8.84	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	KMT2D	O14686	5537 aa		8.84	□□□□□ -0.99
CDK5RAP2-218	ENST00000491334	TRAC	P01848	142 aa		8.83	□□□□□ -1
CDK5RAP2-218	ENST00000491334	LYRM7	Q5U5X0	104 aa		8.83	□□□□□ -1
CDK5RAP2-218	ENST00000491334	HSBP1L1	C9JCN9	74 aa		8.82	□□□□□ -1
CDK5RAP2-218	ENST00000491334	CCK	P06307	115 aa		8.8	□□□□□ -1
CDK5RAP2-218	ENST00000491334		A0A1B0GV72	72 aa		8.77	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms