RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 COX7CP15954 63 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 SEC61GP60059 68 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 CLPSL2Q6UWE3 100 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 Q6ZRN7 208 aaPredicted RBP3.06□□□□□ -1.92
CSTF1-205ENST00000490539 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 PRR34Q9NV39 138 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 TOMM7Q9P0U1 55 aa3.06□□□□□ -1.92
CSTF1-205ENST00000490539 IGLV10-54A0A075B6I4 117 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 LECT2O14960 151 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 CRYGAP11844 174 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 RPL18AQ02543 176 aaKnown RBP3.05□□□□□ -1.92
CSTF1-205ENST00000490539 ENHOQ6UWT2 76 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 Q8IZM0 81 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 DPH3Q96FX2 82 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 ORMDL1Q9P0S3 153 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 LRP2P98164 4655 aa3.05□□□□□ -1.92
CSTF1-205ENST00000490539 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.04□□□□□ -1.92
CSTF1-205ENST00000490539 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 NDUFC2O95298 119 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 CCKP06307 115 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 PFN2P35080 140 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 XCL1P47992 114 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 COX17Q14061 63 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 C6orf226Q5I0X4 101 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 S100A7L2Q5SY68 101 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 C9orf129Q5T035 196 aaKnown RBP3.04□□□□□ -1.92
CSTF1-205ENST00000490539 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 OR13C6PQ8NH95 151 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
CSTF1-205ENST00000490539 C14orf132Q9NPU4 83 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 LINC00846Q9NV44 126 aa3.04□□□□□ -1.92
CSTF1-205ENST00000490539 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
CSTF1-205ENST00000490539 NCR3O14931 201 aa3.03□□□□□ -1.92
CSTF1-205ENST00000490539 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.92
CSTF1-205ENST00000490539 SERP2Q8N6R1 65 aa3.03□□□□□ -1.92
CSTF1-205ENST00000490539 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 TRBV10-3A0A0K0K1G6 114 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 J3KT08 172 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 TMEM258P61165 79 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 KIAA0087Q14695 138 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 LINC00474Q9P2X8 69 aa3.02□□□□□ -1.93
CSTF1-205ENST00000490539 IGKV3D-7A0A0C4DH55 119 aa3.01□□□□□ -1.93
CSTF1-205ENST00000490539 H3BQ85 93 aa3.01□□□□□ -1.93
CSTF1-205ENST00000490539 BCE1O60756 84 aa3.01□□□□□ -1.93
CSTF1-205ENST00000490539 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
CSTF1-205ENST00000490539 GVQW2A0A096LPI5 108 aaPredicted RBP3□□□□□ -1.93
CSTF1-205ENST00000490539 hADV29S1A0JD25 119 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 EPM2AB3EWF7 344 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 NDUFC2-KCTD14E9PQ53 114 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 DSCR10P59022 87 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
CSTF1-205ENST00000490539 HIGD2BQ4VC39 106 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 LINC00575Q6W349 94 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 CAMK2N2Q96S95 79 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 UBL5Q9BZL1 73 aa3□□□□□ -1.93
CSTF1-205ENST00000490539 A0A087WVE0 104 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 LOC110117498A0A087WWA1 95 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 PDE6GP18545 87 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 FUSP35637 526 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSTF1-205ENST00000490539 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CSTF1-205ENST00000490539 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
CSTF1-205ENST00000490539 RBM3P98179 157 aaKnown RBP2.98□□□□□ -1.93
CSTF1-205ENST00000490539 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 C6orf99Q4VX62 202 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 KRTAP26-1Q6PEX3 210 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 Q6ZQT0 140 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 Q6ZRP5 223 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 C7orf33Q8WU49 177 aa2.98□□□□□ -1.93
CSTF1-205ENST00000490539 LOC107984640A0A0U1RRK4 108 aa2.97□□□□□ -1.93
CSTF1-205ENST00000490539 IGLV6-57P01721 117 aa2.97□□□□□ -1.93
CSTF1-205ENST00000490539 C5orf47Q569G3 176 aa2.97□□□□□ -1.93
CSTF1-205ENST00000490539 C9orf116Q5BN46 136 aaPredicted RBP2.97□□□□□ -1.93
CSTF1-205ENST00000490539 FAM19A5Q7Z5A7 132 aaPredicted RBP2.97□□□□□ -1.93
CSTF1-205ENST00000490539 C15orf56Q8N910 161 aa2.97□□□□□ -1.93
CSTF1-205ENST00000490539 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
CSTF1-205ENST00000490539 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 TRBV7-6A0A0J9YX20 115 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 SMR3BP02814 79 aaPredicted RBP2.96□□□□□ -1.94
CSTF1-205ENST00000490539 CXCL6P80162 114 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 Q5VSD8 79 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.96□□□□□ -1.94
CSTF1-205ENST00000490539 Q6ZSA8 131 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 FAM19A1Q7Z5A9 133 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 Q8NBF4 154 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 Q8NDZ9 215 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 LAMTOR3Q9UHA4 124 aa2.96□□□□□ -1.94
CSTF1-205ENST00000490539 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
CSTF1-205ENST00000490539 TRAV23DV6A0A075B6W5 121 aa2.95□□□□□ -1.94
CSTF1-205ENST00000490539 CIRBP-AS1Q8TBR5 109 aa2.95□□□□□ -1.94
CSTF1-205ENST00000490539 DIRC1Q969H9 104 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms