RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
TTC28-207ENST00000490475 M0R378 163 aa6.16□□□□□ -1.42
TTC28-207ENST00000490475 NCR3O14931 201 aa6.15□□□□□ -1.42
TTC28-207ENST00000490475 BAALC-AS2P0C853 105 aa6.15□□□□□ -1.42
TTC28-207ENST00000490475 NPC2P61916 151 aa6.15□□□□□ -1.42
TTC28-207ENST00000490475 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
TTC28-207ENST00000490475 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
TTC28-207ENST00000490475 UBE2AP49459 152 aa6.14□□□□□ -1.43
TTC28-207ENST00000490475 DNAL4O96015 105 aa6.13□□□□□ -1.43
TTC28-207ENST00000490475 FAM229BQ4G0N7 80 aa6.13□□□□□ -1.43
TTC28-207ENST00000490475 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
TTC28-207ENST00000490475 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
TTC28-207ENST00000490475 H3BQ85 93 aa6.12□□□□□ -1.43
TTC28-207ENST00000490475 NDUFC2O95298 119 aa6.12□□□□□ -1.43
TTC28-207ENST00000490475 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
TTC28-207ENST00000490475 KRTAP13-1Q8IUC0 172 aa6.12□□□□□ -1.43
TTC28-207ENST00000490475 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
TTC28-207ENST00000490475 PRLHP81277 87 aa6.11□□□□□ -1.43
TTC28-207ENST00000490475 S100A7L2Q5SY68 101 aa6.11□□□□□ -1.43
TTC28-207ENST00000490475 OR13C6PQ8NH95 151 aa6.11□□□□□ -1.43
TTC28-207ENST00000490475 J3KT08 172 aa6.1□□□□□ -1.43
TTC28-207ENST00000490475 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
TTC28-207ENST00000490475 ANAPC11Q9NYG5 84 aa6.1□□□□□ -1.43
TTC28-207ENST00000490475 A0A087X002 238 aa6.09□□□□□ -1.43
TTC28-207ENST00000490475 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
TTC28-207ENST00000490475 LINC00337Q8N6G1 96 aa6.09□□□□□ -1.43
TTC28-207ENST00000490475 CCDC179H3BU77 68 aa6.08□□□□□ -1.44
TTC28-207ENST00000490475 PRYO14603 147 aa6.08□□□□□ -1.44
TTC28-207ENST00000490475 UQCRQO14949 82 aa6.08□□□□□ -1.44
TTC28-207ENST00000490475 SMIM11BQ8TCY0 68 aa6.08□□□□□ -1.44
TTC28-207ENST00000490475 ATOX1O00244 68 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 IGLV6-57P01721 117 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 SPRR1AP35321 89 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 Q6JHZ5 121 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 FAM218AQ96MZ4 157 aa6.07□□□□□ -1.44
TTC28-207ENST00000490475 ETDCA0A1B0GVM5 59 aa6.06□□□□□ -1.44
TTC28-207ENST00000490475 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
TTC28-207ENST00000490475 GHRHP01286 108 aa6.06□□□□□ -1.44
TTC28-207ENST00000490475 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
TTC28-207ENST00000490475 HIGD2AQ9BW72 106 aa6.06□□□□□ -1.44
TTC28-207ENST00000490475 ORMDL1Q9P0S3 153 aa6.06□□□□□ -1.44
TTC28-207ENST00000490475 LPAP08519 4548 aa6.06□□□□□ -1.44
TTC28-207ENST00000490475 TMEM256-PLSCR3K7ERE1 68 aa6.05□□□□□ -1.44
TTC28-207ENST00000490475 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
TTC28-207ENST00000490475 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
TTC28-207ENST00000490475 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
TTC28-207ENST00000490475 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
TTC28-207ENST00000490475 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
TTC28-207ENST00000490475 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
TTC28-207ENST00000490475 TRAV23DV6A0A075B6W5 121 aa6.03□□□□□ -1.44
TTC28-207ENST00000490475 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
TTC28-207ENST00000490475 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
TTC28-207ENST00000490475 GAGE2AQ6NT46 116 aa6.03□□□□□ -1.44
TTC28-207ENST00000490475 ZNF73O43830 326 aaPredicted RBP6.02□□□□□ -1.45
TTC28-207ENST00000490475 ERC2-IT1O76042 136 aa6.02□□□□□ -1.45
TTC28-207ENST00000490475 CCKP06307 115 aa6.02□□□□□ -1.45
TTC28-207ENST00000490475 COX7CP15954 63 aa6.02□□□□□ -1.45
TTC28-207ENST00000490475 PDE6GP18545 87 aa6.02□□□□□ -1.45
TTC28-207ENST00000490475 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
TTC28-207ENST00000490475 Q9BRP9 147 aa6.01□□□□□ -1.45
TTC28-207ENST00000490475 Q6ZRX8 168 aa6□□□□□ -1.45
TTC28-207ENST00000490475 SPRR4Q96PI1 79 aa6□□□□□ -1.45
TTC28-207ENST00000490475 IGLV7-46A0A075B6I9 117 aa5.99□□□□□ -1.45
TTC28-207ENST00000490475 C9orf153Q5TBE3 101 aa5.99□□□□□ -1.45
TTC28-207ENST00000490475 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
TTC28-207ENST00000490475 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
TTC28-207ENST00000490475 C14orf132Q9NPU4 83 aa5.98□□□□□ -1.45
TTC28-207ENST00000490475 MUC2Q02817 5179 aa5.98□□□□□ -1.45
TTC28-207ENST00000490475 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
TTC28-207ENST00000490475 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
TTC28-207ENST00000490475 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
TTC28-207ENST00000490475 hADV29S1A0JD25 119 aa5.96□□□□□ -1.46
TTC28-207ENST00000490475 C6orf99Q4VX62 202 aa5.96□□□□□ -1.46
TTC28-207ENST00000490475 LINC00575Q6W349 94 aa5.96□□□□□ -1.46
TTC28-207ENST00000490475 UBL5Q9BZL1 73 aa5.96□□□□□ -1.46
TTC28-207ENST00000490475 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
TTC28-207ENST00000490475 SPINK1P00995 79 aa5.95□□□□□ -1.46
TTC28-207ENST00000490475 COX7BP24311 80 aa5.95□□□□□ -1.46
TTC28-207ENST00000490475 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
TTC28-207ENST00000490475 TMEM258P61165 79 aa5.94□□□□□ -1.46
TTC28-207ENST00000490475 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
TTC28-207ENST00000490475 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
TTC28-207ENST00000490475 RBM3P98179 157 aaKnown RBP5.93□□□□□ -1.46
TTC28-207ENST00000490475 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
TTC28-207ENST00000490475 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
TTC28-207ENST00000490475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.92□□□□□ -1.46
TTC28-207ENST00000490475 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
TTC28-207ENST00000490475 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
TTC28-207ENST00000490475 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
TTC28-207ENST00000490475 Q8NBF4 154 aa5.91□□□□□ -1.46
TTC28-207ENST00000490475 CXCL6P80162 114 aa5.9□□□□□ -1.46
TTC28-207ENST00000490475 Q6ZQT0 140 aa5.9□□□□□ -1.46
TTC28-207ENST00000490475 A0A1B0GW54 56 aa5.89□□□□□ -1.47
TTC28-207ENST00000490475 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
TTC28-207ENST00000490475 DEFB105AQ8NG35 78 aa5.89□□□□□ -1.47
TTC28-207ENST00000490475 DSCR8Q96T75 97 aa5.89□□□□□ -1.47
TTC28-207ENST00000490475 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
TTC28-207ENST00000490475 MOBPQ13875 183 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms