RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TRBV7-6A0A0J9YX20 115 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 A4D1N5 150 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 CFC1P0CG37 223 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 COX7BP24311 80 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 KRTDAPP60985 99 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 COA6Q5JTJ3 125 aaKnown RBP3.97□□□□□ -1.77
COL9A1-209ENST00000489861 ADAMTSL4-AS1Q5T5F5 129 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 Q8N377 158 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 Q9BRP9 147 aa3.97□□□□□ -1.77
COL9A1-209ENST00000489861 NHP2Q9NX24 153 aaKnown RBP3.97□□□□□ -1.77
COL9A1-209ENST00000489861 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
COL9A1-209ENST00000489861 C3orf79P0CE67 100 aa3.96□□□□□ -1.78
COL9A1-209ENST00000489861 TAL2Q16559 108 aa3.96□□□□□ -1.78
COL9A1-209ENST00000489861 SOSTDC1Q6X4U4 206 aa3.96□□□□□ -1.78
COL9A1-209ENST00000489861 TRAV13-2A0A0B4J235 113 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 A0A1B0GWB2 263 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 SPRR1BP22528 89 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 S100A2P29034 98 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 ELOF1P60002 83 aaKnown RBP3.95□□□□□ -1.78
COL9A1-209ENST00000489861 LITAFQ99732 161 aa3.95□□□□□ -1.78
COL9A1-209ENST00000489861 TEX49A0A1B0GTD5 131 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 CD164Q04900 197 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 VAMP3Q15836 100 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 PRO1933Q9H354 126 aa3.94□□□□□ -1.78
COL9A1-209ENST00000489861 A6NDN8 102 aa3.93□□□□□ -1.78
COL9A1-209ENST00000489861 H7C2G1 150 aa3.92□□□□□ -1.78
COL9A1-209ENST00000489861 S100A6P06703 90 aa3.92□□□□□ -1.78
COL9A1-209ENST00000489861 S100A1P23297 94 aa3.92□□□□□ -1.78
COL9A1-209ENST00000489861 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
COL9A1-209ENST00000489861 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
COL9A1-209ENST00000489861 F8WEM9 126 aa3.91□□□□□ -1.78
COL9A1-209ENST00000489861 SNCGO76070 127 aa3.91□□□□□ -1.78
COL9A1-209ENST00000489861 KMT2DO14686 5537 aa3.9□□□□□ -1.78
COL9A1-209ENST00000489861 TCL1BO95988 128 aa3.9□□□□□ -1.79
COL9A1-209ENST00000489861 MUSTN1Q8IVN3 82 aa3.9□□□□□ -1.79
COL9A1-209ENST00000489861 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
COL9A1-209ENST00000489861 Q5XG85 94 aa3.89□□□□□ -1.79
COL9A1-209ENST00000489861 TTTY13Q9BZ97 58 aa3.89□□□□□ -1.79
COL9A1-209ENST00000489861 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
COL9A1-209ENST00000489861 SCGB1D1O95968 90 aa3.88□□□□□ -1.79
COL9A1-209ENST00000489861 Q1RN00 199 aa3.88□□□□□ -1.79
COL9A1-209ENST00000489861 BVES-AS1Q5T3Y7 98 aa3.88□□□□□ -1.79
COL9A1-209ENST00000489861 ATOH7Q8N100 152 aa3.88□□□□□ -1.79
COL9A1-209ENST00000489861 MT2AP02795 61 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 HRCT1Q6UXD1 115 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 HIST3H2BBQ8N257 126 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 LINC00846Q9NV44 126 aa3.87□□□□□ -1.79
COL9A1-209ENST00000489861 hADV29S1A0JD25 119 aa3.86□□□□□ -1.79
COL9A1-209ENST00000489861 Q6JHZ5 121 aa3.86□□□□□ -1.79
COL9A1-209ENST00000489861 SMIM11BQ8TCY0 68 aa3.86□□□□□ -1.79
COL9A1-209ENST00000489861 HIST1H2BLQ99880 126 aa3.86□□□□□ -1.79
COL9A1-209ENST00000489861 C9orf118A6NHY6 69 aa3.85□□□□□ -1.79
COL9A1-209ENST00000489861 MT1FP04733 61 aa3.85□□□□□ -1.79
COL9A1-209ENST00000489861 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
COL9A1-209ENST00000489861 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
COL9A1-209ENST00000489861 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
COL9A1-209ENST00000489861 OCIAD2Q56VL3 154 aa3.84□□□□□ -1.79
COL9A1-209ENST00000489861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.84□□□□□ -1.79
COL9A1-209ENST00000489861 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
COL9A1-209ENST00000489861 C12orf57Q99622 126 aa3.84□□□□□ -1.79
COL9A1-209ENST00000489861 DLEU1O43261 78 aa3.83□□□□□ -1.8
COL9A1-209ENST00000489861 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
COL9A1-209ENST00000489861 H0YGX0 51 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 COX8AP10176 69 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
COL9A1-209ENST00000489861 Q6ZQY7 126 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 SNHG12Q9BXW3 62 aa3.82□□□□□ -1.8
COL9A1-209ENST00000489861 TRIAP1O43715 76 aa3.81□□□□□ -1.8
COL9A1-209ENST00000489861 PCP4P48539 62 aa3.81□□□□□ -1.8
COL9A1-209ENST00000489861 C1orf195Q5TG92 126 aa3.81□□□□□ -1.8
COL9A1-209ENST00000489861 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
COL9A1-209ENST00000489861 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
COL9A1-209ENST00000489861 A0A1B0GX51 115 aa3.8□□□□□ -1.8
COL9A1-209ENST00000489861 H3BQ85 93 aa3.8□□□□□ -1.8
COL9A1-209ENST00000489861 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
COL9A1-209ENST00000489861 HIGD1BQ9P298 99 aa3.8□□□□□ -1.8
COL9A1-209ENST00000489861 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 TRBV7-7A0A0K0K1E9 115 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 Q6Q795 121 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
COL9A1-209ENST00000489861 LST1O00453 97 aa3.77□□□□□ -1.81
COL9A1-209ENST00000489861 SPATA45Q537H7 98 aa3.77□□□□□ -1.81
COL9A1-209ENST00000489861 TRBV20-1A0A075B6N2 111 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 IGFL1Q6UW32 110 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 PAM16Q9Y3D7 125 aa3.76□□□□□ -1.81
COL9A1-209ENST00000489861 DNAL4O96015 105 aa3.75□□□□□ -1.81
COL9A1-209ENST00000489861 COX6CP09669 75 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms