RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 LINC00483Q53H64 154 aa12.58□□□□□ -0.4
SND1-214ENST00000489417 KRTAP10-4P60372 401 aaPredicted RBP12.56□□□□□ -0.4
SND1-214ENST00000489417 RBM3P98179 157 aaKnown RBP12.56□□□□□ -0.4
SND1-214ENST00000489417 F8WEM9 126 aa12.54□□□□□ -0.4
SND1-214ENST00000489417 FAM229AH3BQW9 127 aa12.54□□□□□ -0.4
SND1-214ENST00000489417 C14orf132Q9NPU4 83 aa12.54□□□□□ -0.4
SND1-214ENST00000489417 PLA2G1BP04054 148 aaKnown RBP12.54□□□□□ -0.4
SND1-214ENST00000489417 SPINK6Q6UWN8 80 aa12.54□□□□□ -0.4
SND1-214ENST00000489417 SRRM2Q9UQ35 2752 aaKnown RBP12.53□□□□□ -0.4
SND1-214ENST00000489417 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
SND1-214ENST00000489417 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
SND1-214ENST00000489417 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
SND1-214ENST00000489417 RYR1P21817 5038 aa12.5□□□□□ -0.41
SND1-214ENST00000489417 DSCR8Q96T75 97 aa12.5□□□□□ -0.41
SND1-214ENST00000489417 ANAPC11Q9NYG5 84 aa12.5□□□□□ -0.41
SND1-214ENST00000489417 FAT1Q14517 4588 aa12.48□□□□□ -0.41
SND1-214ENST00000489417 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
SND1-214ENST00000489417 Q5VSD8 79 aa12.48□□□□□ -0.41
SND1-214ENST00000489417 IGLV8-61A0A075B6I0 122 aa12.47□□□□□ -0.41
SND1-214ENST00000489417 LOC110117498A0A087WWA1 95 aa12.47□□□□□ -0.41
SND1-214ENST00000489417 HSPG2P98160 4391 aa12.47□□□□□ -0.41
SND1-214ENST00000489417 IGLV9-49A0A0B4J1Y8 123 aa12.45□□□□□ -0.42
SND1-214ENST00000489417 Q6ZQT0 140 aa12.45□□□□□ -0.42
SND1-214ENST00000489417 J3QR89 54 aa12.45□□□□□ -0.42
SND1-214ENST00000489417 PDE6GP18545 87 aa12.45□□□□□ -0.42
SND1-214ENST00000489417 KRTAP1-4P0C5Y4 121 aa12.44□□□□□ -0.42
SND1-214ENST00000489417 FAM229BQ4G0N7 80 aa12.43□□□□□ -0.42
SND1-214ENST00000489417 C9orf153Q5TBE3 101 aa12.43□□□□□ -0.42
SND1-214ENST00000489417 K7ERU9 68 aa12.42□□□□□ -0.42
SND1-214ENST00000489417 CCKP06307 115 aa12.42□□□□□ -0.42
SND1-214ENST00000489417 Q6JHZ5 121 aa12.41□□□□□ -0.42
SND1-214ENST00000489417 IGFL1Q6UW32 110 aa12.4□□□□□ -0.42
SND1-214ENST00000489417 Q8N1X5 172 aa12.4□□□□□ -0.42
SND1-214ENST00000489417 MOBPQ13875 183 aa12.39□□□□□ -0.43
SND1-214ENST00000489417 C21orf62-AS1Q17RA5 79 aa12.39□□□□□ -0.43
SND1-214ENST00000489417 Q8NBF4 154 aa12.39□□□□□ -0.43
SND1-214ENST00000489417 KIAA1109Q2LD37 5005 aa12.39□□□□□ -0.43
SND1-214ENST00000489417 KRTAP17-1Q9BYP8 105 aa12.38□□□□□ -0.43
SND1-214ENST00000489417 VPS25Q9BRG1 176 aa12.37□□□□□ -0.43
SND1-214ENST00000489417 A0A087X002 238 aa12.37□□□□□ -0.43
SND1-214ENST00000489417 A0A0G2JQZ4 141 aa12.37□□□□□ -0.43
SND1-214ENST00000489417 CRYGAP11844 174 aa12.37□□□□□ -0.43
SND1-214ENST00000489417 A0A1W2PNM2 257 aa12.35□□□□□ -0.43
SND1-214ENST00000489417 FAM240AA0A1B0GVK7 77 aa12.34□□□□□ -0.43
SND1-214ENST00000489417 KRTAP13-2Q52LG2 175 aa12.34□□□□□ -0.43
SND1-214ENST00000489417 PKHD1L1Q86WI1 4243 aa12.33□□□□□ -0.44
SND1-214ENST00000489417 ACYP1P07311 99 aa12.31□□□□□ -0.44
SND1-214ENST00000489417 SSBP3-AS1Q7Z2R9 100 aa12.31□□□□□ -0.44
SND1-214ENST00000489417 Q6Q795 121 aa12.27□□□□□ -0.45
SND1-214ENST00000489417 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
SND1-214ENST00000489417 A0A1B0GW54 56 aa12.25□□□□□ -0.45
SND1-214ENST00000489417 TYMSOSQ8TAI1 123 aa12.25□□□□□ -0.45
SND1-214ENST00000489417 LINC00846Q9NV44 126 aa12.25□□□□□ -0.45
SND1-214ENST00000489417 HRCT1Q6UXD1 115 aa12.21□□□□□ -0.45
SND1-214ENST00000489417 TRBV7-7A0A0K0K1E9 115 aa12.2□□□□□ -0.46
SND1-214ENST00000489417 CD164Q04900 197 aa12.2□□□□□ -0.46
SND1-214ENST00000489417 CDIP1Q9H305 208 aa12.2□□□□□ -0.46
SND1-214ENST00000489417 A0A087WSZ3 146 aa12.19□□□□□ -0.46
SND1-214ENST00000489417 HERC2O95714 4834 aa12.18□□□□□ -0.46
SND1-214ENST00000489417 UBL5Q9BZL1 73 aa12.17□□□□□ -0.46
SND1-214ENST00000489417 Q6ZVQ6 151 aa12.14□□□□□ -0.47
SND1-214ENST00000489417 NREPQ16612 68 aa12.12□□□□□ -0.47
SND1-214ENST00000489417 KRTAP4-5Q9BYR2 181 aa12.12□□□□□ -0.47
SND1-214ENST00000489417 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
SND1-214ENST00000489417 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
SND1-214ENST00000489417 LINC00643Q86TS7 51 aa12.1□□□□□ -0.47
SND1-214ENST00000489417 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
SND1-214ENST00000489417 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
SND1-214ENST00000489417 SPAG11AQ6PDA7 123 aa12.07□□□□□ -0.48
SND1-214ENST00000489417 SPINK1P00995 79 aa12.04□□□□□ -0.48
SND1-214ENST00000489417 LIMD2Q9BT23 127 aa12.03□□□□□ -0.48
SND1-214ENST00000489417 FAT3Q8TDW7 4589 aa12.02□□□□□ -0.49
SND1-214ENST00000489417 Q5XG85 94 aa12.02□□□□□ -0.49
SND1-214ENST00000489417 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
SND1-214ENST00000489417 IGKV3D-7A0A0C4DH55 119 aa12□□□□□ -0.49
SND1-214ENST00000489417 RPS29P62273 56 aaKnown RBP12□□□□□ -0.49
SND1-214ENST00000489417 LINC00472Q9H8W2 130 aa12□□□□□ -0.49
SND1-214ENST00000489417 BPY2O14599 106 aa11.99□□□□□ -0.49
SND1-214ENST00000489417 OXTP01178 125 aa11.99□□□□□ -0.49
SND1-214ENST00000489417 MT-ATP8P03928 68 aa11.99□□□□□ -0.49
SND1-214ENST00000489417 ASB16-AS1Q495Z4 193 aa11.99□□□□□ -0.49
SND1-214ENST00000489417 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
SND1-214ENST00000489417 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
SND1-214ENST00000489417 Q96NJ1 140 aa11.97□□□□□ -0.49
SND1-214ENST00000489417 CXCL6P80162 114 aa11.96□□□□□ -0.49
SND1-214ENST00000489417 SIGMAR1Q99720 223 aa11.96□□□□□ -0.49
SND1-214ENST00000489417 MT1HL1P0DM35 61 aa11.95□□□□□ -0.5
SND1-214ENST00000489417 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
SND1-214ENST00000489417 J3KT08 172 aa11.93□□□□□ -0.5
SND1-214ENST00000489417 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
SND1-214ENST00000489417 IGKV4-1P06312 121 aa11.9□□□□□ -0.5
SND1-214ENST00000489417 C1orf195Q5TG92 126 aa11.9□□□□□ -0.5
SND1-214ENST00000489417 TNXBP22105 4242 aa11.89□□□□□ -0.51
SND1-214ENST00000489417 DSCR10P59022 87 aa11.89□□□□□ -0.51
SND1-214ENST00000489417 PCLOQ9Y6V0 5065 aa11.88□□□□□ -0.51
SND1-214ENST00000489417 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
SND1-214ENST00000489417 MYCBP2O75592 4640 aa11.86□□□□□ -0.51
SND1-214ENST00000489417 Q8N9L7 120 aa11.86□□□□□ -0.51
SND1-214ENST00000489417 HIST1H4AP62805 103 aaKnown RBP11.85□□□□□ -0.51
SND1-214ENST00000489417 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms