RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 SMIM29Q86T20 159 aa11.05□□□□□ -0.64
CD40-206ENST00000489304 C3orf22Q8N5N4 141 aa11.05□□□□□ -0.64
CD40-206ENST00000489304 SPRR1BP22528 89 aa11.04□□□□□ -0.64
CD40-206ENST00000489304 C21orf62-AS1Q17RA5 79 aa11.03□□□□□ -0.64
CD40-206ENST00000489304 ZNF861PO60384 105 aa11.01□□□□□ -0.65
CD40-206ENST00000489304 XGP55808 180 aa11.01□□□□□ -0.65
CD40-206ENST00000489304 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
CD40-206ENST00000489304 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
CD40-206ENST00000489304 APOBP04114 4563 aaKnown RBP10.99□□□□□ -0.65
CD40-206ENST00000489304 IGLV7-43P04211 117 aa10.98□□□□□ -0.65
CD40-206ENST00000489304 F8WEM9 126 aa10.97□□□□□ -0.65
CD40-206ENST00000489304 IGLV8-61A0A075B6I0 122 aa10.96□□□□□ -0.65
CD40-206ENST00000489304 SPRR4Q96PI1 79 aa10.96□□□□□ -0.65
CD40-206ENST00000489304 MT-ATP8P03928 68 aa10.95□□□□□ -0.66
CD40-206ENST00000489304 LINC00643Q86TS7 51 aa10.95□□□□□ -0.66
CD40-206ENST00000489304 ZNF706Q9Y5V0 76 aaPredicted RBP10.95□□□□□ -0.66
CD40-206ENST00000489304 LINC00483Q53H64 154 aa10.93□□□□□ -0.66
CD40-206ENST00000489304 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
CD40-206ENST00000489304 A0A1W2PNM2 257 aa10.89□□□□□ -0.67
CD40-206ENST00000489304 A0A1B0GW54 56 aa10.89□□□□□ -0.67
CD40-206ENST00000489304 IGFL1Q6UW32 110 aa10.88□□□□□ -0.67
CD40-206ENST00000489304 Q8NBF4 154 aa10.88□□□□□ -0.67
CD40-206ENST00000489304 UBL5Q9BZL1 73 aa10.88□□□□□ -0.67
CD40-206ENST00000489304 Q6JHZ5 121 aa10.87□□□□□ -0.67
CD40-206ENST00000489304 Q6ZVQ6 151 aa10.84□□□□□ -0.67
CD40-206ENST00000489304 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
CD40-206ENST00000489304 A0A0G2JQZ4 141 aa10.82□□□□□ -0.68
CD40-206ENST00000489304 CRYGAP11844 174 aa10.82□□□□□ -0.68
CD40-206ENST00000489304 RPL37AP61513 92 aaKnown RBP10.81□□□□□ -0.68
CD40-206ENST00000489304 Q6Q795 121 aa10.81□□□□□ -0.68
CD40-206ENST00000489304 SVIPQ8NHG7 77 aa10.81□□□□□ -0.68
CD40-206ENST00000489304 EPPK1P58107 5090 aaKnown RBP10.81□□□□□ -0.68
CD40-206ENST00000489304 FAT1Q14517 4588 aa10.81□□□□□ -0.68
CD40-206ENST00000489304 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
CD40-206ENST00000489304 ANAPC11Q9NYG5 84 aa10.81□□□□□ -0.68
CD40-206ENST00000489304 IMUPQ9GZP8 106 aa10.8□□□□□ -0.68
CD40-206ENST00000489304 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
CD40-206ENST00000489304 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
CD40-206ENST00000489304 SCGB1A1P11684 91 aa10.78□□□□□ -0.68
CD40-206ENST00000489304 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
CD40-206ENST00000489304 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CD40-206ENST00000489304 NREPQ16612 68 aa10.76□□□□□ -0.69
CD40-206ENST00000489304 RYR1P21817 5038 aa10.75□□□□□ -0.69
CD40-206ENST00000489304 KRTAP10-4P60372 401 aaPredicted RBP10.75□□□□□ -0.69
CD40-206ENST00000489304 MOBPQ13875 183 aa10.73□□□□□ -0.69
CD40-206ENST00000489304 HSPG2P98160 4391 aa10.73□□□□□ -0.69
CD40-206ENST00000489304 CXCL6P80162 114 aa10.72□□□□□ -0.69
CD40-206ENST00000489304 CDK2AP2O75956 126 aa10.71□□□□□ -0.69
CD40-206ENST00000489304 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
CD40-206ENST00000489304 A0A087WSZ3 146 aa10.7□□□□□ -0.7
CD40-206ENST00000489304 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
CD40-206ENST00000489304 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
CD40-206ENST00000489304 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
CD40-206ENST00000489304 SSBP3-AS1Q7Z2R9 100 aa10.67□□□□□ -0.7
CD40-206ENST00000489304 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
CD40-206ENST00000489304 BPY2O14599 106 aa10.65□□□□□ -0.7
CD40-206ENST00000489304 A0A087X002 238 aa10.64□□□□□ -0.71
CD40-206ENST00000489304 HIST1H4AP62805 103 aaKnown RBP10.64□□□□□ -0.71
CD40-206ENST00000489304 KRTAP13-2Q52LG2 175 aa10.64□□□□□ -0.71
CD40-206ENST00000489304 A0A087WVE0 104 aa10.61□□□□□ -0.71
CD40-206ENST00000489304 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
CD40-206ENST00000489304 PCP4P48539 62 aa10.61□□□□□ -0.71
CD40-206ENST00000489304 Q5VSD8 79 aa10.61□□□□□ -0.71
CD40-206ENST00000489304 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
CD40-206ENST00000489304 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
CD40-206ENST00000489304 CD164Q04900 197 aa10.6□□□□□ -0.71
CD40-206ENST00000489304 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
CD40-206ENST00000489304 PKHD1L1Q86WI1 4243 aa10.59□□□□□ -0.71
CD40-206ENST00000489304 PLA2G1BP04054 148 aaKnown RBP10.59□□□□□ -0.71
CD40-206ENST00000489304 LINC00472Q9H8W2 130 aa10.58□□□□□ -0.72
CD40-206ENST00000489304 SS18L2Q9UHA2 77 aa10.57□□□□□ -0.72
CD40-206ENST00000489304 IGKV4-1P06312 121 aa10.56□□□□□ -0.72
CD40-206ENST00000489304 DSCR10P59022 87 aa10.56□□□□□ -0.72
CD40-206ENST00000489304 Q8N9L7 120 aa10.55□□□□□ -0.72
CD40-206ENST00000489304 DEFB116Q30KQ4 102 aa10.53□□□□□ -0.72
CD40-206ENST00000489304 Q96NJ1 140 aa10.52□□□□□ -0.73
CD40-206ENST00000489304 PRR26Q8N8Z3 221 aa10.51□□□□□ -0.73
CD40-206ENST00000489304 Q8N1X5 172 aa10.5□□□□□ -0.73
CD40-206ENST00000489304 J3KT08 172 aa10.5□□□□□ -0.73
CD40-206ENST00000489304 TYMSOSQ8TAI1 123 aa10.5□□□□□ -0.73
CD40-206ENST00000489304 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
CD40-206ENST00000489304 K7EQZ3 153 aa10.48□□□□□ -0.73
CD40-206ENST00000489304 ATOX1O00244 68 aa10.47□□□□□ -0.73
CD40-206ENST00000489304 BIRC6Q9NR09 4857 aa10.47□□□□□ -0.73
CD40-206ENST00000489304 ASB16-AS1Q495Z4 193 aa10.47□□□□□ -0.73
CD40-206ENST00000489304 A8MWP4 228 aa10.45□□□□□ -0.74
CD40-206ENST00000489304 Q5XG85 94 aa10.45□□□□□ -0.74
CD40-206ENST00000489304 PRR15Q8IV56 129 aa10.42□□□□□ -0.74
CD40-206ENST00000489304 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
CD40-206ENST00000489304 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
CD40-206ENST00000489304 NDUFB1O75438 58 aa10.38□□□□□ -0.75
CD40-206ENST00000489304 SPINK1P00995 79 aa10.38□□□□□ -0.75
CD40-206ENST00000489304 LIMD2Q9BT23 127 aa10.38□□□□□ -0.75
CD40-206ENST00000489304 LINC00304Q8N9R0 145 aa10.38□□□□□ -0.75
CD40-206ENST00000489304 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
CD40-206ENST00000489304 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
CD40-206ENST00000489304 SPAG11AQ6PDA7 123 aa10.36□□□□□ -0.75
CD40-206ENST00000489304 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
CD40-206ENST00000489304 RPS29P62273 56 aaKnown RBP10.35□□□□□ -0.75
CD40-206ENST00000489304 SMIM20Q8N5G0 67 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms