RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PAM16Q9Y3D7 125 aa13.69□□□□□ -0.22
HMGN1-217ENST00000489072 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
HMGN1-217ENST00000489072 C9orf92A6NGG3 77 aa13.66□□□□□ -0.22
HMGN1-217ENST00000489072 C1orf195Q5TG92 126 aa13.66□□□□□ -0.22
HMGN1-217ENST00000489072 F8WEM9 126 aa13.64□□□□□ -0.23
HMGN1-217ENST00000489072 CFC1BP0CG36 223 aa13.64□□□□□ -0.23
HMGN1-217ENST00000489072 CFC1P0CG37 223 aa13.64□□□□□ -0.23
HMGN1-217ENST00000489072 HIGD1BQ9P298 99 aa13.64□□□□□ -0.23
HMGN1-217ENST00000489072 BVES-AS1Q5T3Y7 98 aa13.63□□□□□ -0.23
HMGN1-217ENST00000489072 C2orf91Q6ZV80 131 aa13.63□□□□□ -0.23
HMGN1-217ENST00000489072 VAMP8Q9BV40 100 aa13.62□□□□□ -0.23
HMGN1-217ENST00000489072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-217ENST00000489072 IGLV8-61A0A075B6I0 122 aa13.59□□□□□ -0.23
HMGN1-217ENST00000489072 RAB37Q96AX2 223 aa13.57□□□□□ -0.24
HMGN1-217ENST00000489072 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
HMGN1-217ENST00000489072 OCIAD2Q56VL3 154 aa13.56□□□□□ -0.24
HMGN1-217ENST00000489072 Q6JHZ5 121 aa13.56□□□□□ -0.24
HMGN1-217ENST00000489072 IGFL1Q6UW32 110 aa13.56□□□□□ -0.24
HMGN1-217ENST00000489072 TCL1BO95988 128 aa13.54□□□□□ -0.24
HMGN1-217ENST00000489072 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
HMGN1-217ENST00000489072 PCOTHQ58A44 107 aa13.53□□□□□ -0.24
HMGN1-217ENST00000489072 PPDPFLQ8WWR9 84 aa13.53□□□□□ -0.24
HMGN1-217ENST00000489072 CEND1Q8N111 149 aa13.51□□□□□ -0.25
HMGN1-217ENST00000489072 TRBV7-7A0A0K0K1E9 115 aa13.5□□□□□ -0.25
HMGN1-217ENST00000489072 FAM218AQ96MZ4 157 aa13.5□□□□□ -0.25
HMGN1-217ENST00000489072 SNHG12Q9BXW3 62 aa13.5□□□□□ -0.25
HMGN1-217ENST00000489072 H0YGX0 51 aa13.47□□□□□ -0.25
HMGN1-217ENST00000489072 H3BUT2 72 aa13.47□□□□□ -0.25
HMGN1-217ENST00000489072 FXYD2P54710 66 aa13.46□□□□□ -0.25
HMGN1-217ENST00000489072 PYY3Q5JQD4 70 aa13.46□□□□□ -0.25
HMGN1-217ENST00000489072 PRO1854Q9UHT4 67 aa13.44□□□□□ -0.26
HMGN1-217ENST00000489072 TMEM238LA0A1B0GVL6 79 aa13.42□□□□□ -0.26
HMGN1-217ENST00000489072 A6NJY4 79 aa13.42□□□□□ -0.26
HMGN1-217ENST00000489072 KRTAP9-2Q9BYQ4 174 aa13.41□□□□□ -0.26
HMGN1-217ENST00000489072 SNCGO76070 127 aa13.4□□□□□ -0.26
HMGN1-217ENST00000489072 RPL37P61927 97 aaKnown RBP13.39□□□□□ -0.27
HMGN1-217ENST00000489072 LCE2CQ5TA81 110 aa13.39□□□□□ -0.27
HMGN1-217ENST00000489072 KRTAP19-2Q3LHN2 52 aa13.38□□□□□ -0.27
HMGN1-217ENST00000489072 TRIAP1O43715 76 aa13.36□□□□□ -0.27
HMGN1-217ENST00000489072 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
HMGN1-217ENST00000489072 A0A1B0GX51 115 aa13.35□□□□□ -0.27
HMGN1-217ENST00000489072 HSD52Q0P140 79 aa13.33□□□□□ -0.28
HMGN1-217ENST00000489072 TMA7Q9Y2S6 64 aaKnown RBP13.33□□□□□ -0.28
HMGN1-217ENST00000489072 Q6Q795 121 aa13.32□□□□□ -0.28
HMGN1-217ENST00000489072 K7ERJ3 54 aa13.3□□□□□ -0.28
HMGN1-217ENST00000489072 LST1O00453 97 aa13.29□□□□□ -0.28
HMGN1-217ENST00000489072 FABP2P12104 132 aa13.28□□□□□ -0.28
HMGN1-217ENST00000489072 TEN1Q86WV5 123 aa13.28□□□□□ -0.28
HMGN1-217ENST00000489072 H3BMG7 143 aa13.27□□□□□ -0.29
HMGN1-217ENST00000489072 OBSCN-AS1Q96MR7 158 aa13.25□□□□□ -0.29
HMGN1-217ENST00000489072 SS18L2Q9UHA2 77 aa13.25□□□□□ -0.29
HMGN1-217ENST00000489072 GHRHP01286 108 aa13.24□□□□□ -0.29
HMGN1-217ENST00000489072 UQCR10Q9UDW1 63 aa13.23□□□□□ -0.29
HMGN1-217ENST00000489072 PSMB2P49721 201 aa13.22□□□□□ -0.29
HMGN1-217ENST00000489072 A0A087WSZ3 146 aa13.21□□□□□ -0.29
HMGN1-217ENST00000489072 MT1HP80294 61 aa13.2□□□□□ -0.3
HMGN1-217ENST00000489072 A0A1W2PNM2 257 aa13.18□□□□□ -0.3
HMGN1-217ENST00000489072 DNAL4O96015 105 aa13.17□□□□□ -0.3
HMGN1-217ENST00000489072 Q96NJ1 140 aa13.17□□□□□ -0.3
HMGN1-217ENST00000489072 ORMDL1Q9P0S3 153 aa13.17□□□□□ -0.3
HMGN1-217ENST00000489072 Q75L30 129 aa13.16□□□□□ -0.3
HMGN1-217ENST00000489072 COX6CP09669 75 aa13.14□□□□□ -0.31
HMGN1-217ENST00000489072 A0A1B0GV72 72 aa13.13□□□□□ -0.31
HMGN1-217ENST00000489072 H3BQ85 93 aa13.11□□□□□ -0.31
HMGN1-217ENST00000489072 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
HMGN1-217ENST00000489072 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
HMGN1-217ENST00000489072 ATP11AUNQ6ZP68 121 aa13.09□□□□□ -0.31
HMGN1-217ENST00000489072 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
HMGN1-217ENST00000489072 C20orf166-AS1Q96NR2 134 aa13.05□□□□□ -0.32
HMGN1-217ENST00000489072 FLGP20930 4061 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-217ENST00000489072 TRACP01848 142 aa13.03□□□□□ -0.32
HMGN1-217ENST00000489072 A8MUU9 505 aa13.02□□□□□ -0.33
HMGN1-217ENST00000489072 DSCR10P59022 87 aa13.02□□□□□ -0.33
HMGN1-217ENST00000489072 UBE2V1Q13404 147 aa13.02□□□□□ -0.33
HMGN1-217ENST00000489072 COX6B2Q6YFQ2 88 aa13.02□□□□□ -0.33
HMGN1-217ENST00000489072 SIGMAR1Q99720 223 aa13.02□□□□□ -0.33
HMGN1-217ENST00000489072 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
HMGN1-217ENST00000489072 CCKP06307 115 aa12.99□□□□□ -0.33
HMGN1-217ENST00000489072 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
HMGN1-217ENST00000489072 KRTAP9-6A0A140TA67 174 aa12.94□□□□□ -0.34
HMGN1-217ENST00000489072 LORP23490 312 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-217ENST00000489072 KRTAP10-6P60371 365 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-217ENST00000489072 LINC00472Q9H8W2 130 aa12.94□□□□□ -0.34
HMGN1-217ENST00000489072 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
HMGN1-217ENST00000489072 M0R2T5 61 aa12.9□□□□□ -0.34
HMGN1-217ENST00000489072 LINC00313P59037 77 aa12.9□□□□□ -0.34
HMGN1-217ENST00000489072 RBM3P98179 157 aaKnown RBP12.9□□□□□ -0.34
HMGN1-217ENST00000489072 KRTAP16-1A8MUX0 517 aa12.89□□□□□ -0.35
HMGN1-217ENST00000489072 NOTCH2NLQ7Z3S9 236 aa12.89□□□□□ -0.35
HMGN1-217ENST00000489072 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
HMGN1-217ENST00000489072 VPS25Q9BRG1 176 aa12.88□□□□□ -0.35
HMGN1-217ENST00000489072 M0R143 59 aa12.87□□□□□ -0.35
HMGN1-217ENST00000489072 NAA38Q9BRA0 125 aaKnown RBP12.87□□□□□ -0.35
HMGN1-217ENST00000489072 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
HMGN1-217ENST00000489072 SMIM6P0DI80 62 aa12.83□□□□□ -0.36
HMGN1-217ENST00000489072 IGHV6-1A0A0B4J1U7 121 aa12.81□□□□□ -0.36
HMGN1-217ENST00000489072 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
HMGN1-217ENST00000489072 C9JAW5 83 aa12.78□□□□□ -0.36
HMGN1-217ENST00000489072 A0A1B0GVX0 72 aa12.74□□□□□ -0.37
HMGN1-217ENST00000489072 Q6ZQT0 140 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms