RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 EPDR1Q9UM22 224 aa0.89□□□□□ -2.27
ITGB1-214ENST00000488427 A0A087WSZ3 146 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 TRBV10-2A0A0K0K1G8 114 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 TRDV1A0A1B0GX56 115 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 SSNA1O43805 119 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 FCER1GP30273 86 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 SULT1A1P50225 295 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 AKR1D1P51857 326 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 ZNF345Q14585 488 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 PYDC1Q8WXC3 89 aa0.88□□□□□ -2.27
ITGB1-214ENST00000488427 ANP32BQ92688 251 aaKnown RBP0.88□□□□□ -2.27
ITGB1-214ENST00000488427 PDE6GP18545 87 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 SPINK7P58062 85 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 S100A12P80511 92 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 TEX261Q6UWH6 196 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 Q6ZRX8 168 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 KCNQ1DNQ9H478 68 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 ZFP30Q9Y2G7 519 aa0.87□□□□□ -2.27
ITGB1-214ENST00000488427 SMIM31A0A1B0GVY4 71 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 SMLR1H3BR10 107 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 S100A11P31949 105 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 SDC2P34741 201 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 UBE2G1P62253 170 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 FABP9Q0Z7S8 132 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.86□□□□□ -2.27
ITGB1-214ENST00000488427 TMEM229BQ8NBD8 167 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 ST20Q9HBF5 79 aa0.86□□□□□ -2.27
ITGB1-214ENST00000488427 C17orf112F2Z3M2 114 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 SPRR1BP22528 89 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 MRPS36P82909 103 aaKnown RBP0.85□□□□□ -2.27
ITGB1-214ENST00000488427 STX12Q86Y82 276 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 CNBD2Q96M20 576 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 PRRT1Q99946 306 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 C9orf16Q9BUW7 83 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 FAM107BQ9H098 131 aa0.85□□□□□ -2.27
ITGB1-214ENST00000488427 TRBV27A0A0K0K1C4 114 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 TINCRA0A1B0GVN0 87 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 LEPROTO15243 131 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 HMGB3O15347 200 aaKnown RBP0.84□□□□□ -2.27
ITGB1-214ENST00000488427 TMEM128Q5BJH2 165 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 TMEM191AQ9H0A3 160 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 SPANXA1Q9NS26 97 aa0.84□□□□□ -2.27
ITGB1-214ENST00000488427 TRBV10-3A0A0K0K1G6 114 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 D6R8Y8 96 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 F2Z2F3 143 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 NCR3O14931 201 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 IGLC6P0CF74 106 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 AKAIN1P0CW23 69 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 POLR2KP53803 58 aaKnown RBP0.83□□□□□ -2.28
ITGB1-214ENST00000488427 RPL39P62891 51 aaKnown RBP0.83□□□□□ -2.28
ITGB1-214ENST00000488427 SMIM15Q7Z3B0 74 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 C8orf59Q8N0T1 100 aaPredicted RBP0.83□□□□□ -2.28
ITGB1-214ENST00000488427 COX7B2Q8TF08 81 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 AMELXQ99217 191 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 SCP2D1Q9UJQ7 156 aa0.83□□□□□ -2.28
ITGB1-214ENST00000488427 LST1O00453 97 aa0.82□□□□□ -2.28
ITGB1-214ENST00000488427 SFT2D2O95562 160 aa0.82□□□□□ -2.28
ITGB1-214ENST00000488427 SRP19P09132 144 aaKnown RBP0.82□□□□□ -2.28
ITGB1-214ENST00000488427 GCHFRP30047 84 aa0.82□□□□□ -2.28
ITGB1-214ENST00000488427 LINC00299Q6ZSB3 139 aa0.82□□□□□ -2.28
ITGB1-214ENST00000488427 C2orf88Q9BSF0 95 aa0.82□□□□□ -2.28
ITGB1-214ENST00000488427 LSM5Q9Y4Y9 91 aaKnown RBP0.82□□□□□ -2.28
ITGB1-214ENST00000488427 A0A1B0GV50 99 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 A0A1W2PRE2 83 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 ATP5HO75947 161 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 CSAG1Q6PB30 78 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 MT1LQ93083 61 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 WDR61Q9GZS3 305 aaKnown RBP0.81□□□□□ -2.28
ITGB1-214ENST00000488427 TMEM167BQ9NRX6 74 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 CDKN2A-AS1Q9UH64 79 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 TPRKBQ9Y3C4 175 aa0.81□□□□□ -2.28
ITGB1-214ENST00000488427 INMT-MINDY4F8WBC2 141 aa0.8□□□□□ -2.28
ITGB1-214ENST00000488427 IFI27P40305 119 aaPredicted RBP0.8□□□□□ -2.28
ITGB1-214ENST00000488427 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
ITGB1-214ENST00000488427 COX17Q14061 63 aa0.8□□□□□ -2.28
ITGB1-214ENST00000488427 TMEM141Q96I45 108 aa0.8□□□□□ -2.28
ITGB1-214ENST00000488427 ERG28Q9UKR5 140 aa0.8□□□□□ -2.28
ITGB1-214ENST00000488427 TRBV7-7A0A0K0K1E9 115 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 TEX49A0A1B0GTD5 131 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 FAM25AB3EWG3 89 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 FAM25CB3EWG5 89 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 FAM25GB3EWG6 89 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 RPL35P42766 123 aaKnown RBP0.79□□□□□ -2.28
ITGB1-214ENST00000488427 SEC11AP67812 179 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 DEFB105AQ8NG35 78 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 MCFD2Q8NI22 146 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 MAP1LC3AQ9H492 121 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 TNFSF18Q9UNG2 199 aa0.79□□□□□ -2.28
ITGB1-214ENST00000488427 TRBV20OR9-2A0A075B6H5 130 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 A0A087WXM4 84 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 F8WEM9 126 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 SIX6O95475 246 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 IFITM2Q01629 132 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 BAGE2Q86Y30 109 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 CNFNQ9BYD5 112 aa0.78□□□□□ -2.28
ITGB1-214ENST00000488427 PPP1R17O96001 155 aa0.77□□□□□ -2.29
ITGB1-214ENST00000488427 MRPS10P82664 201 aaKnown RBP0.77□□□□□ -2.29
ITGB1-214ENST00000488427 KRTAP6-2Q3LI66 62 aa0.77□□□□□ -2.29
ITGB1-214ENST00000488427 C9orf62Q8N4C0 152 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms