RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 hADV29S1A0JD25 119 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 J3QQQ9 107 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 CD164L2Q6UWJ8 174 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 CDC42SE2Q9NRR3 84 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
TNFSF4-203ENST00000488053 TRBV6-5A0A0K0K1A5 114 aa3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 PPP1R17O96001 155 aa3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 PHF5AQ7RTV0 110 aaKnown RBP3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 SCGB3A1Q96QR1 104 aa3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 CAMK2N2Q96S95 79 aa3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 PSORS1C2Q9UIG4 136 aa3.86□□□□□ -1.79
TNFSF4-203ENST00000488053 COX7A2LO14548 114 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 BCE1O60756 84 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 POLR2KP53803 58 aaKnown RBP3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 SFTA2Q6UW10 78 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 DAND5Q8N907 189 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
TNFSF4-203ENST00000488053 TRBV27A0A0K0K1C4 114 aa3.84□□□□□ -1.79
TNFSF4-203ENST00000488053 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
TNFSF4-203ENST00000488053 LGALS3P17931 250 aaKnown RBP3.84□□□□□ -1.79
TNFSF4-203ENST00000488053 ATP5EP56381 51 aaPredicted RBP3.84□□□□□ -1.79
TNFSF4-203ENST00000488053 UBE2D4Q9Y2X8 147 aa3.84□□□□□ -1.79
TNFSF4-203ENST00000488053 FAM236DA0A1B0GTK5 79 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 LST1O00453 97 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 FAM236CP0DP71 79 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 SPAG11BQ08648 103 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 S100A7L2Q5SY68 101 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 Q8N377 158 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 TMEM141Q96I45 108 aa3.83□□□□□ -1.8
TNFSF4-203ENST00000488053 LEPROTO15243 131 aa3.82□□□□□ -1.8
TNFSF4-203ENST00000488053 RPL39P62891 51 aaKnown RBP3.82□□□□□ -1.8
TNFSF4-203ENST00000488053 Q6JHZ5 121 aa3.82□□□□□ -1.8
TNFSF4-203ENST00000488053 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
TNFSF4-203ENST00000488053 DSCR8Q96T75 97 aa3.82□□□□□ -1.8
TNFSF4-203ENST00000488053 TMEM223A0PJW6 202 aa3.81□□□□□ -1.8
TNFSF4-203ENST00000488053 NDUFC1O43677 76 aa3.81□□□□□ -1.8
TNFSF4-203ENST00000488053 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
TNFSF4-203ENST00000488053 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
TNFSF4-203ENST00000488053 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 A0A0U1RRA0 63 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 H7C2G1 150 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 NDUFA1O15239 70 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 ZNF22P17026 224 aaPredicted RBP3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 Q6ZVQ6 151 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 MUSTN1Q8IVN3 82 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 DIRC1Q969H9 104 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 FAM104AQ969W3 186 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 C6orf48Q9UBA6 75 aa3.8□□□□□ -1.8
TNFSF4-203ENST00000488053 IGHV3OR16-9A0A0B4J2B5 98 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 H0Y9J4 135 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 DSCR10P59022 87 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 UBE2BP63146 152 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 CD164Q04900 197 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
TNFSF4-203ENST00000488053 A0A0J9YXY3 114 aa3.78□□□□□ -1.8
TNFSF4-203ENST00000488053 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
TNFSF4-203ENST00000488053 PRR4Q16378 134 aa3.78□□□□□ -1.8
TNFSF4-203ENST00000488053 TIMM17AQ99595 171 aa3.78□□□□□ -1.8
TNFSF4-203ENST00000488053 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
TNFSF4-203ENST00000488053 TIMM17BO60830 172 aa3.77□□□□□ -1.81
TNFSF4-203ENST00000488053 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
TNFSF4-203ENST00000488053 TLX1NBP0CAT3 122 aa3.77□□□□□ -1.81
TNFSF4-203ENST00000488053 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
TNFSF4-203ENST00000488053 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 DNAL4O96015 105 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 BAALC-AS2P0C853 105 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
TNFSF4-203ENST00000488053 MUC2Q02817 5179 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 PRR15Q8IV56 129 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 TOMM7Q9P0U1 55 aa3.75□□□□□ -1.81
TNFSF4-203ENST00000488053 FAM19A1Q7Z5A9 133 aa3.74□□□□□ -1.81
TNFSF4-203ENST00000488053 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
TNFSF4-203ENST00000488053 AMELXQ99217 191 aa3.74□□□□□ -1.81
TNFSF4-203ENST00000488053 XAGE1AQ9HD64 81 aa3.74□□□□□ -1.81
TNFSF4-203ENST00000488053 TRBV7-6A0A0J9YX20 115 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 A0A0U1RQV1 116 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 IGIPA6NJ69 53 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 ZNF861PO60384 105 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 KLKP1Q107X0 134 aa3.73□□□□□ -1.81
TNFSF4-203ENST00000488053 MRPL55Q7Z7F7 128 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms