RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 Q8N377 158 aa8.33□□□□□ -1.08
NUP188-207ENST00000487952 PPDPFLQ8WWR9 84 aa8.33□□□□□ -1.08
NUP188-207ENST00000487952 TRBV20-1A0A075B6N2 111 aa8.32□□□□□ -1.08
NUP188-207ENST00000487952 TCL1BO95988 128 aa8.32□□□□□ -1.08
NUP188-207ENST00000487952 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
NUP188-207ENST00000487952 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
NUP188-207ENST00000487952 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
NUP188-207ENST00000487952 F8WEM9 126 aa8.31□□□□□ -1.08
NUP188-207ENST00000487952 H3BQ85 93 aa8.31□□□□□ -1.08
NUP188-207ENST00000487952 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
NUP188-207ENST00000487952 MOBPQ13875 183 aa8.3□□□□□ -1.08
NUP188-207ENST00000487952 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
NUP188-207ENST00000487952 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
NUP188-207ENST00000487952 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
NUP188-207ENST00000487952 Q8NBF4 154 aa8.28□□□□□ -1.08
NUP188-207ENST00000487952 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
NUP188-207ENST00000487952 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
NUP188-207ENST00000487952 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
NUP188-207ENST00000487952 TMEM256-PLSCR3K7ERE1 68 aa8.26□□□□□ -1.09
NUP188-207ENST00000487952 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
NUP188-207ENST00000487952 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
NUP188-207ENST00000487952 BAALC-AS2P0C853 105 aa8.24□□□□□ -1.09
NUP188-207ENST00000487952 NDUFV3P56181 108 aaKnown RBP8.24□□□□□ -1.09
NUP188-207ENST00000487952 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
NUP188-207ENST00000487952 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
NUP188-207ENST00000487952 C9JAW5 83 aa8.23□□□□□ -1.09
NUP188-207ENST00000487952 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
NUP188-207ENST00000487952 H3BMG7 143 aa8.21□□□□□ -1.1
NUP188-207ENST00000487952 UBE2V1Q13404 147 aa8.21□□□□□ -1.1
NUP188-207ENST00000487952 K7EP34 96 aa8.2□□□□□ -1.1
NUP188-207ENST00000487952 Q6JHZ5 121 aa8.2□□□□□ -1.1
NUP188-207ENST00000487952 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
NUP188-207ENST00000487952 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
NUP188-207ENST00000487952 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
NUP188-207ENST00000487952 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
NUP188-207ENST00000487952 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
NUP188-207ENST00000487952 A0A1B0GV72 72 aa8.18□□□□□ -1.1
NUP188-207ENST00000487952 H3BT86 120 aa8.17□□□□□ -1.1
NUP188-207ENST00000487952 MTURNQ8N3F0 131 aa8.16□□□□□ -1.1
NUP188-207ENST00000487952 SPINK1P00995 79 aa8.15□□□□□ -1.1
NUP188-207ENST00000487952 IGFL1Q6UW32 110 aa8.15□□□□□ -1.1
NUP188-207ENST00000487952 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
NUP188-207ENST00000487952 A0A0G2JQZ4 141 aa8.13□□□□□ -1.11
NUP188-207ENST00000487952 JMJD7-PLA2G4BH0Y9G9 81 aa8.13□□□□□ -1.11
NUP188-207ENST00000487952 RBM3P98179 157 aaKnown RBP8.13□□□□□ -1.11
NUP188-207ENST00000487952 CD164Q04900 197 aa8.13□□□□□ -1.11
NUP188-207ENST00000487952 TNXBP22105 4242 aa8.13□□□□□ -1.11
NUP188-207ENST00000487952 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
NUP188-207ENST00000487952 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
NUP188-207ENST00000487952 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
NUP188-207ENST00000487952 TEN1Q86WV5 123 aa8.08□□□□□ -1.12
NUP188-207ENST00000487952 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
NUP188-207ENST00000487952 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
NUP188-207ENST00000487952 TRBV7-7A0A0K0K1E9 115 aa8.06□□□□□ -1.12
NUP188-207ENST00000487952 A0A1B0GV90 55 aa8.06□□□□□ -1.12
NUP188-207ENST00000487952 CCKP06307 115 aa8.06□□□□□ -1.12
NUP188-207ENST00000487952 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
NUP188-207ENST00000487952 F8W1H4 67 aa8.05□□□□□ -1.12
NUP188-207ENST00000487952 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
NUP188-207ENST00000487952 Q6Q795 121 aa8.05□□□□□ -1.12
NUP188-207ENST00000487952 C14orf132Q9NPU4 83 aa8.05□□□□□ -1.12
NUP188-207ENST00000487952 A0A1W2PNM2 257 aa8.04□□□□□ -1.12
NUP188-207ENST00000487952 PDE6GP18545 87 aa8.04□□□□□ -1.12
NUP188-207ENST00000487952 OBSCN-AS1Q96MR7 158 aa8.03□□□□□ -1.12
NUP188-207ENST00000487952 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
NUP188-207ENST00000487952 LOC110117498A0A087WWA1 95 aa8.02□□□□□ -1.13
NUP188-207ENST00000487952 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
NUP188-207ENST00000487952 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
NUP188-207ENST00000487952 A0A087WSZ3 146 aa8.01□□□□□ -1.13
NUP188-207ENST00000487952 PRR4Q16378 134 aa8.01□□□□□ -1.13
NUP188-207ENST00000487952 Q5XG85 94 aa8.01□□□□□ -1.13
NUP188-207ENST00000487952 Q6ZQT0 140 aa8.01□□□□□ -1.13
NUP188-207ENST00000487952 ETDBQ3ZM63 59 aa7.97□□□□□ -1.13
NUP188-207ENST00000487952 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
NUP188-207ENST00000487952 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.14
NUP188-207ENST00000487952 A0A1B0GW54 56 aa7.95□□□□□ -1.14
NUP188-207ENST00000487952 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
NUP188-207ENST00000487952 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
NUP188-207ENST00000487952 HERC1Q15751 4861 aa7.92□□□□□ -1.14
NUP188-207ENST00000487952 NREPQ16612 68 aa7.87□□□□□ -1.15
NUP188-207ENST00000487952 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
NUP188-207ENST00000487952 IGKV4-1P06312 121 aa7.85□□□□□ -1.15
NUP188-207ENST00000487952 Q96NJ1 140 aa7.84□□□□□ -1.15
NUP188-207ENST00000487952 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
NUP188-207ENST00000487952 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
NUP188-207ENST00000487952 DEFB116Q30KQ4 102 aa7.83□□□□□ -1.16
NUP188-207ENST00000487952 J3KT08 172 aa7.82□□□□□ -1.16
NUP188-207ENST00000487952 UBL5Q9BZL1 73 aa7.81□□□□□ -1.16
NUP188-207ENST00000487952 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
NUP188-207ENST00000487952 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
NUP188-207ENST00000487952 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
NUP188-207ENST00000487952 LINC00846Q9NV44 126 aa7.79□□□□□ -1.16
NUP188-207ENST00000487952 Q6ZVQ6 151 aa7.78□□□□□ -1.16
NUP188-207ENST00000487952 NDUFB1O75438 58 aa7.77□□□□□ -1.17
NUP188-207ENST00000487952 ACYP1P07311 99 aa7.77□□□□□ -1.17
NUP188-207ENST00000487952 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
NUP188-207ENST00000487952 J3QR89 54 aa7.76□□□□□ -1.17
NUP188-207ENST00000487952 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
NUP188-207ENST00000487952 BPY2O14599 106 aa7.75□□□□□ -1.17
NUP188-207ENST00000487952 IGHV6-1A0A0B4J1U7 121 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms