RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 CDC42SE2Q9NRR3 84 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 A0A096LNJ9 63 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 H3BMG7 143 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 ARL14EPLP0DKL9 152 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 HBBP68871 147 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 AMN1Q8IY45 258 aa2.24□□□□□ -2.05
BRCA1-217ENST00000487825 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
BRCA1-217ENST00000487825 FAM236AA0A1B0GUQ0 79 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 FAM236BA0A1B0GV22 79 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 K7ERS5 55 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 TMEM258P61165 79 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
BRCA1-217ENST00000487825 PRLHP81277 87 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 MRPL51Q4U2R6 128 aaKnown RBP2.23□□□□□ -2.05
BRCA1-217ENST00000487825 LYZL1Q6UWQ5 148 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 PCP2Q8IVA1 136 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 MIEN1Q9BRT3 115 aa2.23□□□□□ -2.05
BRCA1-217ENST00000487825 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 TSPEAR-AS2P59090 65 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 TEN1Q86WV5 123 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 Q9H521 79 aa2.22□□□□□ -2.05
BRCA1-217ENST00000487825 UQCRQO14949 82 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 LEPROTO15243 131 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 MPC2O95563 127 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 GCHFRP30047 84 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 ATOH7Q8N100 152 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 SPRR4Q96PI1 79 aa2.21□□□□□ -2.06
BRCA1-217ENST00000487825 NDUFB6O95139 128 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 LINC00483Q53H64 154 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 C10orf91Q5T1B1 145 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 C7orf65Q6ZTY9 151 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 TOMM5Q8N4H5 51 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 COPS9Q8WXC6 57 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 PRELID3AQ96N28 172 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 OSTCQ9NRP0 149 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 TMEM167BQ9NRX6 74 aa2.2□□□□□ -2.06
BRCA1-217ENST00000487825 TMEM223A0PJW6 202 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 SDHAF1A6NFY7 115 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 A8MWP4 228 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 I3L3M4 83 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 IGLV6-57P01721 117 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 TRGC1P0CF51 173 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 UBE2G1P62253 170 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 PYY3Q5JQD4 70 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 LINC01545Q5VT33 79 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 C2orf82Q6UX34 121 aa2.19□□□□□ -2.06
BRCA1-217ENST00000487825 RPL39LQ96EH5 51 aaKnown RBP2.19□□□□□ -2.06
BRCA1-217ENST00000487825 TRBV20-1A0A075B6N2 111 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 TRBV24-1A0A075B6N3 115 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 C7orf77A4D0Y5 90 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 K7ERJ3 54 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 NPYP01303 97 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 HBDP02042 147 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 SPINK8P0C7L1 97 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 Q6ZUT4 128 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 TMEM242Q9NWH2 141 aa2.18□□□□□ -2.06
BRCA1-217ENST00000487825 IFITM1P13164 125 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 SPRR2EP22531 72 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 SPRR2BP35325 72 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 SPRR2AP35326 72 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 MRPL54Q6P161 138 aaKnown RBP2.17□□□□□ -2.06
BRCA1-217ENST00000487825 ADM2Q7Z4H4 148 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 HIGD2AQ9BW72 106 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 SEC11CQ9BY50 192 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 TTTY13Q9BZ97 58 aa2.17□□□□□ -2.06
BRCA1-217ENST00000487825 TRBV6-5A0A0K0K1A5 114 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 TCL1BO95988 128 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 DEFB116Q30KQ4 102 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 SSBP3-AS1Q7Z2R9 100 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 SVBPQ8N300 66 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 MIR7-3HGQ8N6C7 128 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 RAB37Q96AX2 223 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 MED9Q9NWA0 146 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 TRAPPC1Q9Y5R8 145 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
BRCA1-217ENST00000487825 A6NED7 52 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 NAP1L6A6NFF2 107 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 F2Z2F3 143 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 H3BT86 120 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 TIMM21Q9BVV7 248 aa2.15□□□□□ -2.07
BRCA1-217ENST00000487825 A6NN06 94 aa2.14□□□□□ -2.07
BRCA1-217ENST00000487825 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
BRCA1-217ENST00000487825 PYDC2Q56P42 97 aa2.14□□□□□ -2.07
BRCA1-217ENST00000487825 CLLU1Q5K131 121 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms