RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 A0A1B0GWB2 263 aa11.73□□□□□ -0.53
RPL35-203ENST00000487431 FXYD2P54710 66 aa11.73□□□□□ -0.53
RPL35-203ENST00000487431 ELOF1P60002 83 aaKnown RBP11.73□□□□□ -0.53
RPL35-203ENST00000487431 VAMP3Q15836 100 aa11.73□□□□□ -0.53
RPL35-203ENST00000487431 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
RPL35-203ENST00000487431 LIMD2Q9BT23 127 aa11.72□□□□□ -0.53
RPL35-203ENST00000487431 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
RPL35-203ENST00000487431 PRO1854Q9UHT4 67 aa11.7□□□□□ -0.54
RPL35-203ENST00000487431 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
RPL35-203ENST00000487431 H7C2G1 150 aa11.67□□□□□ -0.54
RPL35-203ENST00000487431 M0R143 59 aa11.67□□□□□ -0.54
RPL35-203ENST00000487431 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
RPL35-203ENST00000487431 LAMTOR3Q9UHA4 124 aa11.67□□□□□ -0.54
RPL35-203ENST00000487431 Q1RN00 199 aa11.66□□□□□ -0.54
RPL35-203ENST00000487431 CD164Q04900 197 aa11.65□□□□□ -0.54
RPL35-203ENST00000487431 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
RPL35-203ENST00000487431 PCOTHQ58A44 107 aa11.62□□□□□ -0.55
RPL35-203ENST00000487431 FSIP2Q5CZC0 6907 aa11.61□□□□□ -0.55
RPL35-203ENST00000487431 C9orf92A6NGG3 77 aa11.59□□□□□ -0.55
RPL35-203ENST00000487431 Q5XG85 94 aa11.59□□□□□ -0.55
RPL35-203ENST00000487431 IGLV8-61A0A075B6I0 122 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 H0YGX0 51 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 K7ERJ3 54 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 SNCGO76070 127 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 MT1HP80294 61 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 LINC00575Q6W349 94 aa11.58□□□□□ -0.56
RPL35-203ENST00000487431 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
RPL35-203ENST00000487431 SMIM29Q86T20 159 aa11.56□□□□□ -0.56
RPL35-203ENST00000487431 PSMB2P49721 201 aa11.55□□□□□ -0.56
RPL35-203ENST00000487431 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
RPL35-203ENST00000487431 COX6CP09669 75 aa11.54□□□□□ -0.56
RPL35-203ENST00000487431 CRCT1Q9UGL9 99 aa11.54□□□□□ -0.56
RPL35-203ENST00000487431 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
RPL35-203ENST00000487431 TRIAP1O43715 76 aa11.51□□□□□ -0.57
RPL35-203ENST00000487431 C1orf195Q5TG92 126 aa11.51□□□□□ -0.57
RPL35-203ENST00000487431 A0A1B0GX51 115 aa11.5□□□□□ -0.57
RPL35-203ENST00000487431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.49□□□□□ -0.57
RPL35-203ENST00000487431 BATFQ16520 125 aa11.47□□□□□ -0.57
RPL35-203ENST00000487431 Q6ZQY7 126 aa11.47□□□□□ -0.57
RPL35-203ENST00000487431 GHRHP01286 108 aa11.45□□□□□ -0.58
RPL35-203ENST00000487431 OCIAD2Q56VL3 154 aa11.45□□□□□ -0.58
RPL35-203ENST00000487431 LORP23490 312 aaPredicted RBP11.44□□□□□ -0.58
RPL35-203ENST00000487431 RPL37P61927 97 aaKnown RBP11.44□□□□□ -0.58
RPL35-203ENST00000487431 PPDPFLQ8WWR9 84 aa11.44□□□□□ -0.58
RPL35-203ENST00000487431 A0A0G2JQZ4 141 aa11.43□□□□□ -0.58
RPL35-203ENST00000487431 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
RPL35-203ENST00000487431 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
RPL35-203ENST00000487431 DNAL4O96015 105 aa11.41□□□□□ -0.58
RPL35-203ENST00000487431 KRTAP10-6P60371 365 aaPredicted RBP11.4□□□□□ -0.58
RPL35-203ENST00000487431 CLEC2BQ92478 149 aa11.4□□□□□ -0.58
RPL35-203ENST00000487431 F8WEM9 126 aa11.39□□□□□ -0.59
RPL35-203ENST00000487431 LYRM7Q5U5X0 104 aa11.38□□□□□ -0.59
RPL35-203ENST00000487431 H3BQ85 93 aa11.37□□□□□ -0.59
RPL35-203ENST00000487431 TCL1BO95988 128 aa11.36□□□□□ -0.59
RPL35-203ENST00000487431 FLGP20930 4061 aaPredicted RBP11.35□□□□□ -0.59
RPL35-203ENST00000487431 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
RPL35-203ENST00000487431 TRACP01848 142 aa11.34□□□□□ -0.59
RPL35-203ENST00000487431 LST1O00453 97 aa11.33□□□□□ -0.6
RPL35-203ENST00000487431 NAA38Q9BRA0 125 aaKnown RBP11.32□□□□□ -0.6
RPL35-203ENST00000487431 ORMDL1Q9P0S3 153 aa11.32□□□□□ -0.6
RPL35-203ENST00000487431 PCP4L1A6NKN8 68 aa11.3□□□□□ -0.6
RPL35-203ENST00000487431 ATXN8Q156A1 80 aa11.3□□□□□ -0.6
RPL35-203ENST00000487431 C9orf118A6NHY6 69 aa11.29□□□□□ -0.6
RPL35-203ENST00000487431 H3BUT2 72 aa11.29□□□□□ -0.6
RPL35-203ENST00000487431 FABP2P12104 132 aa11.29□□□□□ -0.6
RPL35-203ENST00000487431 TMEM256-PLSCR3K7ERE1 68 aa11.28□□□□□ -0.6
RPL35-203ENST00000487431 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
RPL35-203ENST00000487431 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
RPL35-203ENST00000487431 TRBV20-1A0A075B6N2 111 aa11.27□□□□□ -0.61
RPL35-203ENST00000487431 Q6JHZ5 121 aa11.27□□□□□ -0.61
RPL35-203ENST00000487431 COX6B2Q6YFQ2 88 aa11.27□□□□□ -0.61
RPL35-203ENST00000487431 M0R2T5 61 aa11.26□□□□□ -0.61
RPL35-203ENST00000487431 NDUFV3P56181 108 aaKnown RBP11.26□□□□□ -0.61
RPL35-203ENST00000487431 TRBV7-7A0A0K0K1E9 115 aa11.23□□□□□ -0.61
RPL35-203ENST00000487431 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
RPL35-203ENST00000487431 IGFL1Q6UW32 110 aa11.22□□□□□ -0.61
RPL35-203ENST00000487431 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
RPL35-203ENST00000487431 H3BMG7 143 aa11.2□□□□□ -0.62
RPL35-203ENST00000487431 Q75L30 129 aa11.18□□□□□ -0.62
RPL35-203ENST00000487431 BAALC-AS2P0C853 105 aa11.17□□□□□ -0.62
RPL35-203ENST00000487431 ANKRD29Q8N6D5 301 aa11.14□□□□□ -0.63
RPL35-203ENST00000487431 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
RPL35-203ENST00000487431 ATP11AUNQ6ZP68 121 aa11.13□□□□□ -0.63
RPL35-203ENST00000487431 C9JAW5 83 aa11.12□□□□□ -0.63
RPL35-203ENST00000487431 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
RPL35-203ENST00000487431 Q6Q795 121 aa11.09□□□□□ -0.63
RPL35-203ENST00000487431 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.64
RPL35-203ENST00000487431 TEN1Q86WV5 123 aa11.08□□□□□ -0.64
RPL35-203ENST00000487431 A0A1B0GV72 72 aa11.07□□□□□ -0.64
RPL35-203ENST00000487431 JMJD7-PLA2G4BH0Y9G9 81 aa11.07□□□□□ -0.64
RPL35-203ENST00000487431 H3BT86 120 aa11.06□□□□□ -0.64
RPL35-203ENST00000487431 DSCR8Q96T75 97 aa11.06□□□□□ -0.64
RPL35-203ENST00000487431 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
RPL35-203ENST00000487431 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.65
RPL35-203ENST00000487431 Q96NJ1 140 aa11.02□□□□□ -0.65
RPL35-203ENST00000487431 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.65
RPL35-203ENST00000487431 K7EP34 96 aa11.01□□□□□ -0.65
RPL35-203ENST00000487431 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
RPL35-203ENST00000487431 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms