RNA–Protein interactions for RNA: ENST00000487112.5

PGAP2-222, Transcript of post-GPI attachment to proteins 2, human

TSL 3

Gene PGAP2, Length 792 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-222	ENST00000487112	SPRR1B	P22528	89 aa		11.32	□□□□□ -0.6
PGAP2-222	ENST00000487112		F8WEM9	126 aa		11.31	□□□□□ -0.6
PGAP2-222	ENST00000487112	C1orf137	Q5JT78	98 aa		11.3	□□□□□ -0.6
PGAP2-222	ENST00000487112	SCX	Q7RTU7	201 aa		11.3	□□□□□ -0.6
PGAP2-222	ENST00000487112	XG	P55808	180 aa		11.29	□□□□□ -0.6
PGAP2-222	ENST00000487112	SMIM29	Q86T20	159 aa		11.28	□□□□□ -0.6
PGAP2-222	ENST00000487112	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.28	□□□□□ -0.6
PGAP2-222	ENST00000487112	LINC00643	Q86TS7	51 aa		11.27	□□□□□ -0.61
PGAP2-222	ENST00000487112	C3orf22	Q8N5N4	141 aa		11.27	□□□□□ -0.61
PGAP2-222	ENST00000487112	ZNF861P	O60384	105 aa		11.26	□□□□□ -0.61
PGAP2-222	ENST00000487112	LINC00846	Q9NV44	126 aa		11.26	□□□□□ -0.61
PGAP2-222	ENST00000487112		A0A1B0GVY2	172 aa		11.25	□□□□□ -0.61
PGAP2-222	ENST00000487112	MT-ATP8	P03928	68 aa		11.25	□□□□□ -0.61
PGAP2-222	ENST00000487112	IGLV8-61	A0A075B6I0	122 aa		11.24	□□□□□ -0.61
PGAP2-222	ENST00000487112	PKD1	P98161	4303 aa		11.24	□□□□□ -0.61
PGAP2-222	ENST00000487112	IGLV7-43	P04211	117 aa		11.23	□□□□□ -0.61
PGAP2-222	ENST00000487112		A0A1B0GW54	56 aa		11.22	□□□□□ -0.61
PGAP2-222	ENST00000487112	SPRR4	Q96PI1	79 aa		11.22	□□□□□ -0.61
PGAP2-222	ENST00000487112	UBL5	Q9BZL1	73 aa		11.21	□□□□□ -0.61
PGAP2-222	ENST00000487112	LINC00483	Q53H64	154 aa		11.2	□□□□□ -0.62
PGAP2-222	ENST00000487112		Q6JHZ5	121 aa		11.19	□□□□□ -0.62
PGAP2-222	ENST00000487112	ABCA13	Q86UQ4	5058 aa		11.19	□□□□□ -0.62
PGAP2-222	ENST00000487112		Q8NBF4	154 aa		11.18	□□□□□ -0.62
PGAP2-222	ENST00000487112	ATP5EP2	Q5VTU8	51 aa		11.17	□□□□□ -0.62
PGAP2-222	ENST00000487112	DYNC1H1	Q14204	4646 aa	Known RBP	11.17	□□□□□ -0.62
PGAP2-222	ENST00000487112	TRBV7-7	A0A0K0K1E9	115 aa		11.16	□□□□□ -0.62
PGAP2-222	ENST00000487112	SCGB1A1	P11684	91 aa		11.16	□□□□□ -0.62
PGAP2-222	ENST00000487112		Q6Q795	121 aa		11.15	□□□□□ -0.62
PGAP2-222	ENST00000487112		A0A1W2PNM2	257 aa		11.14	□□□□□ -0.63
PGAP2-222	ENST00000487112	HAMP	P81172	84 aa		11.14	□□□□□ -0.63
PGAP2-222	ENST00000487112	IMUP	Q9GZP8	106 aa		11.14	□□□□□ -0.63
PGAP2-222	ENST00000487112	IGFL1	Q6UW32	110 aa		11.13	□□□□□ -0.63
PGAP2-222	ENST00000487112		Q6ZVQ6	151 aa		11.12	□□□□□ -0.63
PGAP2-222	ENST00000487112	PKHD1	P08F94	4074 aa		11.11	□□□□□ -0.63
PGAP2-222	ENST00000487112	RPL37A	P61513	92 aa	Known RBP	11.11	□□□□□ -0.63
PGAP2-222	ENST00000487112	LRP1B	Q9NZR2	4599 aa		11.11	□□□□□ -0.63
PGAP2-222	ENST00000487112	CRYGA	P11844	174 aa		11.09	□□□□□ -0.63
PGAP2-222	ENST00000487112	IGKV3D-7	A0A0C4DH55	119 aa		11.05	□□□□□ -0.64
PGAP2-222	ENST00000487112	NREP	Q16612	68 aa		11.05	□□□□□ -0.64
PGAP2-222	ENST00000487112	C9orf153	Q5TBE3	101 aa		11.05	□□□□□ -0.64
PGAP2-222	ENST00000487112	IGLV9-49	A0A0B4J1Y8	123 aa		11.04	□□□□□ -0.64
PGAP2-222	ENST00000487112	CXCL6	P80162	114 aa		11.04	□□□□□ -0.64
PGAP2-222	ENST00000487112		A0A0G2JQZ4	141 aa		10.99	□□□□□ -0.65
PGAP2-222	ENST00000487112	MOBP	Q13875	183 aa		10.99	□□□□□ -0.65
PGAP2-222	ENST00000487112	FAM229B	Q4G0N7	80 aa		10.98	□□□□□ -0.65
PGAP2-222	ENST00000487112		A0A087WSZ3	146 aa		10.97	□□□□□ -0.65
PGAP2-222	ENST00000487112	ANAPC11	Q9NYG5	84 aa		10.97	□□□□□ -0.65
PGAP2-222	ENST00000487112	APOB	P04114	4563 aa	Known RBP	10.96	□□□□□ -0.66
PGAP2-222	ENST00000487112	HSPG2	P98160	4391 aa		10.95	□□□□□ -0.66
PGAP2-222	ENST00000487112	BPY2	O14599	106 aa		10.95	□□□□□ -0.66
PGAP2-222	ENST00000487112	SPINK6	Q6UWN8	80 aa		10.94	□□□□□ -0.66
PGAP2-222	ENST00000487112	HIST1H4A	P62805	103 aa	Known RBP	10.93	□□□□□ -0.66
PGAP2-222	ENST00000487112	SSBP3-AS1	Q7Z2R9	100 aa		10.93	□□□□□ -0.66
PGAP2-222	ENST00000487112	KRTAP4-5	Q9BYR2	181 aa		10.93	□□□□□ -0.66
PGAP2-222	ENST00000487112	PCP4	P48539	62 aa		10.92	□□□□□ -0.66
PGAP2-222	ENST00000487112	FAM236A	A0A1B0GUQ0	79 aa		10.91	□□□□□ -0.66
PGAP2-222	ENST00000487112	FAM236B	A0A1B0GV22	79 aa		10.91	□□□□□ -0.66
PGAP2-222	ENST00000487112	CD164	Q04900	197 aa		10.89	□□□□□ -0.67
PGAP2-222	ENST00000487112	SS18L2	Q9UHA2	77 aa		10.89	□□□□□ -0.67
PGAP2-222	ENST00000487112	SMR3B	P02814	79 aa	Predicted RBP	10.88	□□□□□ -0.67
PGAP2-222	ENST00000487112	KRTAP1-4	P0C5Y4	121 aa		10.88	□□□□□ -0.67
PGAP2-222	ENST00000487112		A0A087WVE0	104 aa		10.87	□□□□□ -0.67
PGAP2-222	ENST00000487112	CDK2AP2	O75956	126 aa		10.84	□□□□□ -0.67
PGAP2-222	ENST00000487112	SRRM2	Q9UQ35	2752 aa	Known RBP	10.84	□□□□□ -0.67
PGAP2-222	ENST00000487112	HERC1	Q15751	4861 aa		10.84	□□□□□ -0.67
PGAP2-222	ENST00000487112		A0A087X002	238 aa		10.83	□□□□□ -0.68
PGAP2-222	ENST00000487112	IGKV4-1	P06312	121 aa		10.83	□□□□□ -0.68
PGAP2-222	ENST00000487112	KRTAP13-2	Q52LG2	175 aa		10.83	□□□□□ -0.68
PGAP2-222	ENST00000487112	ANAPC13	Q9BS18	74 aa		10.83	□□□□□ -0.68
PGAP2-222	ENST00000487112	VPS13B	Q7Z7G8	4022 aa		10.83	□□□□□ -0.68
PGAP2-222	ENST00000487112	ATOX1	O00244	68 aa		10.82	□□□□□ -0.68
PGAP2-222	ENST00000487112	KRTAP10-4	P60372	401 aa	Predicted RBP	10.82	□□□□□ -0.68
PGAP2-222	ENST00000487112	LINC00472	Q9H8W2	130 aa		10.82	□□□□□ -0.68
PGAP2-222	ENST00000487112		J3KT08	172 aa		10.81	□□□□□ -0.68
PGAP2-222	ENST00000487112	DSCR10	P59022	87 aa		10.81	□□□□□ -0.68
PGAP2-222	ENST00000487112	HRCT1	Q6UXD1	115 aa		10.81	□□□□□ -0.68
PGAP2-222	ENST00000487112	PLA2G1B	P04054	148 aa	Known RBP	10.8	□□□□□ -0.68
PGAP2-222	ENST00000487112		Q8N9L7	120 aa		10.78	□□□□□ -0.68
PGAP2-222	ENST00000487112	FAM229A	H3BQW9	127 aa		10.77	□□□□□ -0.69
PGAP2-222	ENST00000487112		A8MWP4	228 aa		10.74	□□□□□ -0.69
PGAP2-222	ENST00000487112		K7EQZ3	153 aa		10.74	□□□□□ -0.69
PGAP2-222	ENST00000487112	TYMSOS	Q8TAI1	123 aa		10.74	□□□□□ -0.69
PGAP2-222	ENST00000487112	DEFB116	Q30KQ4	102 aa		10.73	□□□□□ -0.69
PGAP2-222	ENST00000487112	ASB16-AS1	Q495Z4	193 aa		10.73	□□□□□ -0.69
PGAP2-222	ENST00000487112		Q5XG85	94 aa		10.73	□□□□□ -0.69
PGAP2-222	ENST00000487112		Q96NJ1	140 aa		10.73	□□□□□ -0.69
PGAP2-222	ENST00000487112	FAT1	Q14517	4588 aa		10.73	□□□□□ -0.69
PGAP2-222	ENST00000487112	SMIM20	Q8N5G0	67 aa		10.7	□□□□□ -0.7
PGAP2-222	ENST00000487112	NDUFB1	O75438	58 aa		10.69	□□□□□ -0.7
PGAP2-222	ENST00000487112	PRR15	Q8IV56	129 aa		10.69	□□□□□ -0.7
PGAP2-222	ENST00000487112	LIMD2	Q9BT23	127 aa		10.69	□□□□□ -0.7
PGAP2-222	ENST00000487112	C4orf48	Q5BLP8	95 aa		10.68	□□□□□ -0.7
PGAP2-222	ENST00000487112	HCG22	E2RYF7	251 aa		10.67	□□□□□ -0.7
PGAP2-222	ENST00000487112		Q5VSD8	79 aa		10.67	□□□□□ -0.7
PGAP2-222	ENST00000487112	SERP2	Q8N6R1	65 aa		10.66	□□□□□ -0.7
PGAP2-222	ENST00000487112	PRR26	Q8N8Z3	221 aa		10.66	□□□□□ -0.7
PGAP2-222	ENST00000487112	SPINK1	P00995	79 aa		10.65	□□□□□ -0.7
PGAP2-222	ENST00000487112	SPAG11A	Q6PDA7	123 aa		10.65	□□□□□ -0.7
PGAP2-222	ENST00000487112	PKHD1L1	Q86WI1	4243 aa		10.64	□□□□□ -0.71
PGAP2-222	ENST00000487112	RPS29	P62273	56 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms