RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
SHROOM3-208ENST00000486758 UBE2AP49459 152 aa8.05□□□□□ -1.12
SHROOM3-208ENST00000486758 A0A1W2PNM2 257 aa8.04□□□□□ -1.12
SHROOM3-208ENST00000486758 A6NED7 52 aa8.04□□□□□ -1.12
SHROOM3-208ENST00000486758 PCOTHQ58A44 107 aa8.04□□□□□ -1.12
SHROOM3-208ENST00000486758 LINC00588Q9Y4M8 146 aa8.04□□□□□ -1.12
SHROOM3-208ENST00000486758 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.12
SHROOM3-208ENST00000486758 Q8NBF4 154 aa8.02□□□□□ -1.12
SHROOM3-208ENST00000486758 ERC2-IT1O76042 136 aa8.02□□□□□ -1.13
SHROOM3-208ENST00000486758 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
SHROOM3-208ENST00000486758 Q6ZRX8 168 aa8.01□□□□□ -1.13
SHROOM3-208ENST00000486758 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
SHROOM3-208ENST00000486758 LINC00476Q8WZB0 136 aa8□□□□□ -1.13
SHROOM3-208ENST00000486758 CHTF8P0CG12 524 aa8□□□□□ -1.13
SHROOM3-208ENST00000486758 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
SHROOM3-208ENST00000486758 H0Y9P7 68 aa7.99□□□□□ -1.13
SHROOM3-208ENST00000486758 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
SHROOM3-208ENST00000486758 B9D2Q9BPU9 175 aa7.98□□□□□ -1.13
SHROOM3-208ENST00000486758 NDUFB1O75438 58 aa7.97□□□□□ -1.13
SHROOM3-208ENST00000486758 CASC2Q6XLA1 102 aa7.97□□□□□ -1.13
SHROOM3-208ENST00000486758 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
SHROOM3-208ENST00000486758 PRR15Q8IV56 129 aa7.96□□□□□ -1.14
SHROOM3-208ENST00000486758 Q9BRP9 147 aa7.96□□□□□ -1.14
SHROOM3-208ENST00000486758 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
SHROOM3-208ENST00000486758 CDK2AP2O75956 126 aa7.95□□□□□ -1.14
SHROOM3-208ENST00000486758 DSCR10P59022 87 aa7.94□□□□□ -1.14
SHROOM3-208ENST00000486758 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
SHROOM3-208ENST00000486758 H3BS24 57 aa7.94□□□□□ -1.14
SHROOM3-208ENST00000486758 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
SHROOM3-208ENST00000486758 K7EIL1 84 aa7.91□□□□□ -1.14
SHROOM3-208ENST00000486758 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-208ENST00000486758 H3BNG1 76 aa7.91□□□□□ -1.14
SHROOM3-208ENST00000486758 IGFL1Q6UW32 110 aa7.9□□□□□ -1.14
SHROOM3-208ENST00000486758 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
SHROOM3-208ENST00000486758 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
SHROOM3-208ENST00000486758 SPAG11AQ6PDA7 123 aa7.9□□□□□ -1.14
SHROOM3-208ENST00000486758 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
SHROOM3-208ENST00000486758 A8MU10 97 aa7.9□□□□□ -1.15
SHROOM3-208ENST00000486758 DNAH10OSP0CZ25 163 aa7.9□□□□□ -1.15
SHROOM3-208ENST00000486758 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
SHROOM3-208ENST00000486758 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
SHROOM3-208ENST00000486758 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.16
SHROOM3-208ENST00000486758 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
SHROOM3-208ENST00000486758 Q1T7F1 81 aa7.81□□□□□ -1.16
SHROOM3-208ENST00000486758 LY6G6CO95867 125 aa7.8□□□□□ -1.16
SHROOM3-208ENST00000486758 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
SHROOM3-208ENST00000486758 COA5Q86WW8 74 aa7.8□□□□□ -1.16
SHROOM3-208ENST00000486758 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
SHROOM3-208ENST00000486758 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
SHROOM3-208ENST00000486758 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
SHROOM3-208ENST00000486758 KRTAP1-5Q9BYS1 174 aa7.78□□□□□ -1.16
SHROOM3-208ENST00000486758 SPRR4Q96PI1 79 aa7.77□□□□□ -1.16
SHROOM3-208ENST00000486758 A0A1B0GW54 56 aa7.76□□□□□ -1.17
SHROOM3-208ENST00000486758 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
SHROOM3-208ENST00000486758 DNAH9Q9NYC9 4486 aa7.76□□□□□ -1.17
SHROOM3-208ENST00000486758 Q5VV11 94 aa7.75□□□□□ -1.17
SHROOM3-208ENST00000486758 C16orf90A8MZG2 172 aa7.75□□□□□ -1.17
SHROOM3-208ENST00000486758 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
SHROOM3-208ENST00000486758 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
SHROOM3-208ENST00000486758 A8MWP4 228 aa7.72□□□□□ -1.17
SHROOM3-208ENST00000486758 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
SHROOM3-208ENST00000486758 TNP2Q05952 138 aa7.72□□□□□ -1.17
SHROOM3-208ENST00000486758 C8orf87E5RJ46 101 aa7.72□□□□□ -1.17
SHROOM3-208ENST00000486758 CYP4F30PQ9H0H9 118 aa7.72□□□□□ -1.17
SHROOM3-208ENST00000486758 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
SHROOM3-208ENST00000486758 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
SHROOM3-208ENST00000486758 NBDYA0A0U1RRE5 68 aa7.69□□□□□ -1.18
SHROOM3-208ENST00000486758 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
SHROOM3-208ENST00000486758 TLX1NBP0CAT3 122 aa7.69□□□□□ -1.18
SHROOM3-208ENST00000486758 CIRBP-AS1Q8TBR5 109 aa7.69□□□□□ -1.18
SHROOM3-208ENST00000486758 SPRR1AP35321 89 aa7.68□□□□□ -1.18
SHROOM3-208ENST00000486758 KRTAP7-1Q8IUC3 87 aa7.68□□□□□ -1.18
SHROOM3-208ENST00000486758 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
SHROOM3-208ENST00000486758 MOBPQ13875 183 aa7.68□□□□□ -1.18
SHROOM3-208ENST00000486758 LOC101927531A0A1B0GV80 90 aa7.66□□□□□ -1.18
SHROOM3-208ENST00000486758 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
SHROOM3-208ENST00000486758 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
SHROOM3-208ENST00000486758 PLA2G2DQ9UNK4 145 aa7.65□□□□□ -1.18
SHROOM3-208ENST00000486758 IGLV5-52A0A0A0MRZ9 124 aa7.64□□□□□ -1.19
SHROOM3-208ENST00000486758 H3BPC8 53 aa7.63□□□□□ -1.19
SHROOM3-208ENST00000486758 APLNQ9ULZ1 77 aa7.63□□□□□ -1.19
SHROOM3-208ENST00000486758 PANO1I0J062 215 aa7.62□□□□□ -1.19
SHROOM3-208ENST00000486758 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
SHROOM3-208ENST00000486758 DNAH1Q9P2D7 4330 aa7.62□□□□□ -1.19
SHROOM3-208ENST00000486758 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 LCA10Q71F78 164 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 IGLV8-61A0A075B6I0 122 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
SHROOM3-208ENST00000486758 LCE6AA0A183 80 aa7.6□□□□□ -1.19
SHROOM3-208ENST00000486758 RTL8CO15255 209 aa7.6□□□□□ -1.19
SHROOM3-208ENST00000486758 HUWE1Q7Z6Z7 4374 aaKnown RBP7.59□□□□□ -1.19
SHROOM3-208ENST00000486758 SPINK7P58062 85 aa7.59□□□□□ -1.19
SHROOM3-208ENST00000486758 C8orf17Q9NRJ1 99 aa7.59□□□□□ -1.19
SHROOM3-208ENST00000486758 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
SHROOM3-208ENST00000486758 SPINK1P00995 79 aa7.58□□□□□ -1.2
SHROOM3-208ENST00000486758 C7orf65Q6ZTY9 151 aa7.58□□□□□ -1.2
SHROOM3-208ENST00000486758 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms