RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	TLX1NB	P0CAT3	122 aa		4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	HAMP	P81172	84 aa		4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	C9orf116	Q5BN46	136 aa	Predicted RBP	4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	S100A7L2	Q5SY68	101 aa		4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	ATP5EP2	Q5VTU8	51 aa		4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	MRPL55	Q7Z7F7	128 aa	Known RBP	4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	C6orf48	Q9UBA6	75 aa		4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	APOB	P04114	4563 aa	Known RBP	4.63	□□□□□ -1.67
PUDP-204	ENST00000486446	LOC110117498	A0A087WWA1	95 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	C6orf99	Q4VX62	202 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	C15orf56	Q8N910	161 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	CAMK2N2	Q96S95	79 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	C14orf132	Q9NPU4	83 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	LINC00846	Q9NV44	126 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	LAMTOR3	Q9UHA4	124 aa		4.62	□□□□□ -1.67
PUDP-204	ENST00000486446	TRBV10-3	A0A0K0K1G6	114 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	FAM236A	A0A1B0GUQ0	79 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	FAM236B	A0A1B0GV22	79 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	CCDC179	H3BU77	68 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	SMR3B	P02814	79 aa	Predicted RBP	4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	IGKV2-30	P06310	120 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	PDE6G	P18545	87 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	PRR3	P79522	188 aa	Known RBP	4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	SYCN	Q0VAF6	134 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	PKIG	Q9Y2B9	76 aa		4.61	□□□□□ -1.67
PUDP-204	ENST00000486446	FAM236D	A0A1B0GTK5	79 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	hADV29S1	A0JD25	119 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446		M0R378	163 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	ATOX1	O00244	68 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	NCR3	O14931	201 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	FAM236C	P0DP71	79 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	C14orf177	Q52M58	125 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446		Q5VSD8	79 aa		4.6	□□□□□ -1.67
PUDP-204	ENST00000486446	UQCRQ	O14949	82 aa		4.59	□□□□□ -1.67
PUDP-204	ENST00000486446	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.59	□□□□□ -1.67
PUDP-204	ENST00000486446		Q6ZQT0	140 aa		4.59	□□□□□ -1.67
PUDP-204	ENST00000486446		Q6ZRU5	148 aa		4.59	□□□□□ -1.67
PUDP-204	ENST00000486446		Q75L30	129 aa		4.59	□□□□□ -1.67
PUDP-204	ENST00000486446	LINC00526	Q96FQ7	95 aa		4.59	□□□□□ -1.67
PUDP-204	ENST00000486446	MYCBP2	O75592	4640 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	IGLV5-37	A0A075B6J1	123 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	TRAV23DV6	A0A075B6W5	121 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	BCE1	O60756	84 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	COX7C	P15954	63 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	ELOF1	P60002	83 aa	Known RBP	4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	C3orf22	Q8N5N4	141 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	DIRC1	Q969H9	104 aa		4.58	□□□□□ -1.68
PUDP-204	ENST00000486446	CRYGA	P11844	174 aa		4.57	□□□□□ -1.68
PUDP-204	ENST00000486446	RBM3	P98179	157 aa	Known RBP	4.57	□□□□□ -1.68
PUDP-204	ENST00000486446	KCNQ1DN	Q9H478	68 aa		4.57	□□□□□ -1.68
PUDP-204	ENST00000486446	LRP1B	Q9NZR2	4599 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	TRBV7-4	A0A0J9YYF1	115 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	ZNF73	O43830	326 aa	Predicted RBP	4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	HIGD2B	Q4VC39	106 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446		Q6ZRP5	223 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446		Q6ZSA8	131 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	SCX	Q7RTU7	201 aa		4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	FLG2	Q5D862	2391 aa	Predicted RBP	4.56	□□□□□ -1.68
PUDP-204	ENST00000486446	COX7B	P24311	80 aa		4.55	□□□□□ -1.68
PUDP-204	ENST00000486446	CNBP	P62633	177 aa	Known RBP	4.55	□□□□□ -1.68
PUDP-204	ENST00000486446	XAGE1A	Q9HD64	81 aa		4.55	□□□□□ -1.68
PUDP-204	ENST00000486446	DNAH5	Q8TE73	4624 aa		4.55	□□□□□ -1.68
PUDP-204	ENST00000486446	HMCN2	Q8NDA2	5059 aa		4.55	□□□□□ -1.68
PUDP-204	ENST00000486446		Q6ZQY7	126 aa		4.54	□□□□□ -1.68
PUDP-204	ENST00000486446	SERP2	Q8N6R1	65 aa		4.54	□□□□□ -1.68
PUDP-204	ENST00000486446	MPLKIP	Q8TAP9	179 aa		4.54	□□□□□ -1.68
PUDP-204	ENST00000486446	UBL5	Q9BZL1	73 aa		4.54	□□□□□ -1.68
PUDP-204	ENST00000486446	IGKV3D-7	A0A0C4DH55	119 aa		4.53	□□□□□ -1.68
PUDP-204	ENST00000486446	CXCL6	P80162	114 aa		4.53	□□□□□ -1.68
PUDP-204	ENST00000486446		Q5XG85	94 aa		4.53	□□□□□ -1.68
PUDP-204	ENST00000486446	C9orf163	Q8N9P6	203 aa		4.53	□□□□□ -1.68
PUDP-204	ENST00000486446	CIRBP-AS1	Q8TBR5	109 aa		4.53	□□□□□ -1.68
PUDP-204	ENST00000486446	IGLV1-50	A0A075B6I6	118 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	LOC107984640	A0A0U1RRK4	108 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446		A0A1B0GW54	56 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	SPRR1A	P35321	89 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	C9orf153	Q5TBE3	101 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	HRCT1	Q6UXD1	115 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	DSCR8	Q96T75	97 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	RNF213	Q63HN8	5207 aa		4.52	□□□□□ -1.69
PUDP-204	ENST00000486446	DPH3	Q96FX2	82 aa		4.51	□□□□□ -1.69
PUDP-204	ENST00000486446	DHRS4-AS1	Q9P1J3	65 aa		4.51	□□□□□ -1.69
PUDP-204	ENST00000486446	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.5	□□□□□ -1.69
PUDP-204	ENST00000486446		Q6ZVQ6	151 aa		4.5	□□□□□ -1.69
PUDP-204	ENST00000486446	NKAPP1	Q8N9T2	125 aa		4.5	□□□□□ -1.69
PUDP-204	ENST00000486446	C7orf33	Q8WU49	177 aa		4.5	□□□□□ -1.69
PUDP-204	ENST00000486446	IGLV5-48	A0A075B6I7	105 aa		4.49	□□□□□ -1.69
PUDP-204	ENST00000486446		A0A087WVE0	104 aa		4.49	□□□□□ -1.69
PUDP-204	ENST00000486446	LINC01547	P58512	204 aa	Predicted RBP	4.49	□□□□□ -1.69
PUDP-204	ENST00000486446	RPL37A	P61513	92 aa	Known RBP	4.49	□□□□□ -1.69
PUDP-204	ENST00000486446	PANO1	I0J062	215 aa		4.48	□□□□□ -1.69
PUDP-204	ENST00000486446	CHTF8	P0CG12	524 aa		4.48	□□□□□ -1.69
PUDP-204	ENST00000486446	SEC61B	P60468	96 aa	Known RBP	4.48	□□□□□ -1.69
PUDP-204	ENST00000486446	TMEM258	P61165	79 aa		4.48	□□□□□ -1.69
PUDP-204	ENST00000486446		Q6ZRX8	168 aa		4.48	□□□□□ -1.69
PUDP-204	ENST00000486446	LINC00474	Q9P2X8	69 aa		4.48	□□□□□ -1.69
PUDP-204	ENST00000486446	FAT1	Q14517	4588 aa		4.47	□□□□□ -1.69
PUDP-204	ENST00000486446	KRTAP7-1	Q8IUC3	87 aa		4.47	□□□□□ -1.69
PUDP-204	ENST00000486446	TRAV7	A0A075B6U4	112 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms