RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 A0A1B0GW54 56 aa11.1□□□□□ -0.63
TNXB-205ENST00000486148 ZCCHC13Q8WW36 166 aaKnown RBP11.09□□□□□ -0.63
TNXB-205ENST00000486148 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
TNXB-205ENST00000486148 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
TNXB-205ENST00000486148 TRAV22A0A0B4J277 110 aa11.08□□□□□ -0.64
TNXB-205ENST00000486148 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
TNXB-205ENST00000486148 A0A0G2JQZ4 141 aa11.07□□□□□ -0.64
TNXB-205ENST00000486148 A8MU10 97 aa11.06□□□□□ -0.64
TNXB-205ENST00000486148 PRLHP81277 87 aa11.05□□□□□ -0.64
TNXB-205ENST00000486148 PRR4Q16378 134 aa11.05□□□□□ -0.64
TNXB-205ENST00000486148 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
TNXB-205ENST00000486148 C16orf90A8MZG2 172 aa11.05□□□□□ -0.64
TNXB-205ENST00000486148 LINC00476Q8WZB0 136 aa11.05□□□□□ -0.64
TNXB-205ENST00000486148 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
TNXB-205ENST00000486148 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
TNXB-205ENST00000486148 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
TNXB-205ENST00000486148 DSCR10P59022 87 aa11.03□□□□□ -0.64
TNXB-205ENST00000486148 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
TNXB-205ENST00000486148 PSCAO43653 123 aa11.02□□□□□ -0.65
TNXB-205ENST00000486148 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.65
TNXB-205ENST00000486148 A8MUN3 132 aa11.01□□□□□ -0.65
TNXB-205ENST00000486148 K7EQZ3 153 aa11□□□□□ -0.65
TNXB-205ENST00000486148 IGFL1Q6UW32 110 aa11□□□□□ -0.65
TNXB-205ENST00000486148 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
TNXB-205ENST00000486148 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
TNXB-205ENST00000486148 KRTAP11-1Q8IUC1 163 aa10.98□□□□□ -0.65
TNXB-205ENST00000486148 UBE2DNLQ8IWF7 75 aa10.98□□□□□ -0.65
TNXB-205ENST00000486148 APLNQ9ULZ1 77 aa10.97□□□□□ -0.65
TNXB-205ENST00000486148 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.66
TNXB-205ENST00000486148 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
TNXB-205ENST00000486148 Q5VV11 94 aa10.93□□□□□ -0.66
TNXB-205ENST00000486148 CD164Q04900 197 aa10.93□□□□□ -0.66
TNXB-205ENST00000486148 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
TNXB-205ENST00000486148 SRRM2Q9UQ35 2752 aaKnown RBP10.92□□□□□ -0.66
TNXB-205ENST00000486148 DNAH7Q8WXX0 4024 aa10.92□□□□□ -0.66
TNXB-205ENST00000486148 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
TNXB-205ENST00000486148 A0A087WSZ3 146 aa10.91□□□□□ -0.66
TNXB-205ENST00000486148 UBE2AP49459 152 aa10.9□□□□□ -0.66
TNXB-205ENST00000486148 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
TNXB-205ENST00000486148 C14orf177Q52M58 125 aa10.89□□□□□ -0.67
TNXB-205ENST00000486148 HCG22E2RYF7 251 aa10.88□□□□□ -0.67
TNXB-205ENST00000486148 DYNC2H1Q8NCM8 4307 aaKnown RBP10.86□□□□□ -0.67
TNXB-205ENST00000486148 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
TNXB-205ENST00000486148 RPL37AP61513 92 aaKnown RBP10.84□□□□□ -0.67
TNXB-205ENST00000486148 H0Y9J4 135 aa10.84□□□□□ -0.67
TNXB-205ENST00000486148 PANO1I0J062 215 aa10.84□□□□□ -0.67
TNXB-205ENST00000486148 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
TNXB-205ENST00000486148 SPRR1BP22528 89 aa10.83□□□□□ -0.68
TNXB-205ENST00000486148 WFDC13Q8IUB5 93 aa10.82□□□□□ -0.68
TNXB-205ENST00000486148 B9D2Q9BPU9 175 aa10.82□□□□□ -0.68
TNXB-205ENST00000486148 Q8N9P0 234 aaPredicted RBP10.81□□□□□ -0.68
TNXB-205ENST00000486148 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
TNXB-205ENST00000486148 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
TNXB-205ENST00000486148 NDUFB1O75438 58 aa10.81□□□□□ -0.68
TNXB-205ENST00000486148 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
TNXB-205ENST00000486148 KTN1-AS1Q86SY8 53 aa10.79□□□□□ -0.68
TNXB-205ENST00000486148 LINC00208Q96KT6 92 aa10.78□□□□□ -0.68
TNXB-205ENST00000486148 MDFIQ99750 246 aa10.77□□□□□ -0.69
TNXB-205ENST00000486148 PRR15LQ9BU68 103 aa10.77□□□□□ -0.69
TNXB-205ENST00000486148 RBM12B-AS1Q9P1G2 102 aa10.77□□□□□ -0.69
TNXB-205ENST00000486148 LCA10Q71F78 164 aa10.75□□□□□ -0.69
TNXB-205ENST00000486148 SPTSSBQ8NFR3 76 aa10.75□□□□□ -0.69
TNXB-205ENST00000486148 MP68P56378 58 aa10.75□□□□□ -0.69
TNXB-205ENST00000486148 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
TNXB-205ENST00000486148 KRTAP29-1A8MX34 341 aaPredicted RBP10.74□□□□□ -0.69
TNXB-205ENST00000486148 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
TNXB-205ENST00000486148 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
TNXB-205ENST00000486148 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
TNXB-205ENST00000486148 NUPR2A6NF83 97 aa10.71□□□□□ -0.7
TNXB-205ENST00000486148 SPANXA2-OT1Q8N9U9 137 aa10.7□□□□□ -0.7
TNXB-205ENST00000486148 A8MWP4 228 aa10.69□□□□□ -0.7
TNXB-205ENST00000486148 CASC2Q6XLA1 102 aa10.69□□□□□ -0.7
TNXB-205ENST00000486148 SPACA4Q8TDM5 124 aa10.69□□□□□ -0.7
TNXB-205ENST00000486148 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
TNXB-205ENST00000486148 H0Y9P7 68 aa10.68□□□□□ -0.7
TNXB-205ENST00000486148 A6NN06 94 aa10.67□□□□□ -0.7
TNXB-205ENST00000486148 ATP11AUNQ6ZP68 121 aa10.67□□□□□ -0.7
TNXB-205ENST00000486148 Q75L30 129 aa10.67□□□□□ -0.7
TNXB-205ENST00000486148 IGLV9-49A0A0B4J1Y8 123 aa10.65□□□□□ -0.7
TNXB-205ENST00000486148 A6NED7 52 aa10.65□□□□□ -0.7
TNXB-205ENST00000486148 VPS13DQ5THJ4 4388 aa10.63□□□□□ -0.71
TNXB-205ENST00000486148 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
TNXB-205ENST00000486148 A0A087WTM6 91 aa10.62□□□□□ -0.71
TNXB-205ENST00000486148 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
TNXB-205ENST00000486148 COA5Q86WW8 74 aa10.6□□□□□ -0.71
TNXB-205ENST00000486148 NDUFS5O43920 106 aa10.59□□□□□ -0.71
TNXB-205ENST00000486148 Q96NJ1 140 aa10.59□□□□□ -0.71
TNXB-205ENST00000486148 H3BPC8 53 aa10.58□□□□□ -0.72
TNXB-205ENST00000486148 LINC00483Q53H64 154 aa10.57□□□□□ -0.72
TNXB-205ENST00000486148 HECTD4Q9Y4D8 3996 aa10.57□□□□□ -0.72
TNXB-205ENST00000486148 RTL8CO15255 209 aa10.56□□□□□ -0.72
TNXB-205ENST00000486148 CDC42SE1Q9NRR8 79 aa10.56□□□□□ -0.72
TNXB-205ENST00000486148 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
TNXB-205ENST00000486148 MOBPQ13875 183 aa10.54□□□□□ -0.72
TNXB-205ENST00000486148 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
TNXB-205ENST00000486148 ANAPC11Q9NYG5 84 aa10.53□□□□□ -0.72
TNXB-205ENST00000486148 IGLV5-52A0A0A0MRZ9 124 aa10.53□□□□□ -0.72
TNXB-205ENST00000486148 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
TNXB-205ENST00000486148 DNAH2Q9P225 4427 aa10.52□□□□□ -0.73
TNXB-205ENST00000486148 KMT2AQ03164 3969 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms