RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ABCC3O15438 1527 aa-1.01□□□□□ -2.57
GCFC2-209ENST00000486016 VPS13DQ5THJ4 4388 aa-1.01□□□□□ -2.57
GCFC2-209ENST00000486016 MUC17Q685J3 4493 aa-1.02□□□□□ -2.57
GCFC2-209ENST00000486016 LAMA1P25391 3075 aa-1.02□□□□□ -2.57
GCFC2-209ENST00000486016 URB2Q14146 1524 aaKnown RBP-1.02□□□□□ -2.57
GCFC2-209ENST00000486016 ANKRD11Q6UB99 2663 aaPredicted RBP-1.02□□□□□ -2.57
GCFC2-209ENST00000486016 USP9YO00507 2555 aaPredicted RBP-1.02□□□□□ -2.57
GCFC2-209ENST00000486016 DEPDC5O75140 1603 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 MAP3K1Q13233 1512 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 DSPP15924 2871 aaKnown RBP-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 MYO18BQ8IUG5 2567 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 LCE6AA0A183 80 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 PVALEFA0A1B0GWK0 134 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 DEFA5Q01523 94 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 MTORP42345 2549 aa-1.03□□□□□ -2.57
GCFC2-209ENST00000486016 ITPR3Q14573 2671 aa-1.03□□□□□ -2.58
GCFC2-209ENST00000486016 KIF14Q15058 1648 aa-1.04□□□□□ -2.58
GCFC2-209ENST00000486016 MAGI3Q5TCQ9 1506 aa-1.04□□□□□ -2.58
GCFC2-209ENST00000486016 IFI27P40305 119 aaPredicted RBP-1.04□□□□□ -2.58
GCFC2-209ENST00000486016 PRLHP81277 87 aa-1.04□□□□□ -2.58
GCFC2-209ENST00000486016 DIP2BQ9P265 1576 aa-1.04□□□□□ -2.58
GCFC2-209ENST00000486016 ANK3Q12955 4377 aaKnown RBP-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 UMAD1C9J7I0 102 aa-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 TTC37Q6PGP7 1564 aa-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 AKAP9Q99996 3911 aa-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 ACACAQ13085 2346 aa-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 GCN1Q92616 2671 aaKnown RBP-1.05□□□□□ -2.58
GCFC2-209ENST00000486016 ARFGEF2Q9Y6D5 1785 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 PKHD1L1Q86WI1 4243 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 MAP3K4Q9Y6R4 1608 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 LYNX1G3V0Z9 82 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 IFI6P09912 130 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 S4R3F8 94 aa-1.06□□□□□ -2.58
GCFC2-209ENST00000486016 PIK3C2BO00750 1634 aa-1.07□□□□□ -2.58
GCFC2-209ENST00000486016 DEFB130BP0DP73 79 aa-1.07□□□□□ -2.58
GCFC2-209ENST00000486016 DEFB130AP0DP74 79 aa-1.07□□□□□ -2.58
GCFC2-209ENST00000486016 DNAH3Q8TD57 4116 aa-1.08□□□□□ -2.58
GCFC2-209ENST00000486016 PPLO60437 1756 aa-1.08□□□□□ -2.58
GCFC2-209ENST00000486016 NDUFA4O00483 81 aa-1.08□□□□□ -2.58
GCFC2-209ENST00000486016 TDRG1Q3Y452 100 aa-1.08□□□□□ -2.58
GCFC2-209ENST00000486016 CCDC88BA6NC98 1476 aa-1.08□□□□□ -2.58
GCFC2-209ENST00000486016 KANTRA0A1W2PQU2 76 aa-1.09□□□□□ -2.58
GCFC2-209ENST00000486016 IAPPP10997 89 aa-1.09□□□□□ -2.58
GCFC2-209ENST00000486016 KALRNO60229 2985 aa-1.09□□□□□ -2.58
GCFC2-209ENST00000486016 APOBP04114 4563 aaKnown RBP-1.1□□□□□ -2.58
GCFC2-209ENST00000486016 MGAM2Q2M2H8 2515 aa-1.1□□□□□ -2.58
GCFC2-209ENST00000486016 LRRK2Q5S007 2527 aa-1.1□□□□□ -2.59
GCFC2-209ENST00000486016 DDX60LQ5H9U9 1706 aaKnown RBP-1.1□□□□□ -2.59
GCFC2-209ENST00000486016 NREPQ16612 68 aa-1.11□□□□□ -2.59
GCFC2-209ENST00000486016 FAM186AA6NE01 2351 aa-1.11□□□□□ -2.59
GCFC2-209ENST00000486016 DNAH11Q96DT5 4516 aa-1.12□□□□□ -2.59
GCFC2-209ENST00000486016 ATP5EP2Q5VTU8 51 aa-1.12□□□□□ -2.59
GCFC2-209ENST00000486016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.12□□□□□ -2.59
GCFC2-209ENST00000486016 UTP20O75691 2785 aaKnown RBP-1.12□□□□□ -2.59
GCFC2-209ENST00000486016 PKD1L2Q7Z442 2459 aa-1.12□□□□□ -2.59
GCFC2-209ENST00000486016 PLCH1Q4KWH8 1693 aa-1.13□□□□□ -2.59
GCFC2-209ENST00000486016 UACAQ9BZF9 1416 aa-1.13□□□□□ -2.59
GCFC2-209ENST00000486016 DEFB110Q30KQ9 67 aa-1.13□□□□□ -2.59
GCFC2-209ENST00000486016 DEFB106AQ8N104 65 aa-1.13□□□□□ -2.59
GCFC2-209ENST00000486016 CEP290O15078 2479 aa-1.13□□□□□ -2.59
GCFC2-209ENST00000486016 NBEAQ8NFP9 2946 aa-1.14□□□□□ -2.59
GCFC2-209ENST00000486016 CCDC168Q8NDH2 2452 aa-1.15□□□□□ -2.59
GCFC2-209ENST00000486016 VPS13BQ7Z7G8 4022 aa-1.15□□□□□ -2.59
GCFC2-209ENST00000486016 A0A087WXM4 84 aa-1.16□□□□□ -2.6
GCFC2-209ENST00000486016 DEFB131BA0A096LNP1 70 aa-1.16□□□□□ -2.6
GCFC2-209ENST00000486016 EPPK1P58107 5090 aaKnown RBP-1.16□□□□□ -2.6
GCFC2-209ENST00000486016 ACACBO00763 2458 aa-1.17□□□□□ -2.6
GCFC2-209ENST00000486016 DEFB121Q5J5C9 76 aa-1.17□□□□□ -2.6
GCFC2-209ENST00000486016 NBEAL2Q6ZNJ1 2754 aa-1.17□□□□□ -2.6
GCFC2-209ENST00000486016 CFAP43Q8NDM7 1665 aa-1.17□□□□□ -2.6
GCFC2-209ENST00000486016 ITSN1Q15811 1721 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 RICTORQ6R327 1708 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 WDR87Q6ZQQ6 2873 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 TRIOO75962 3097 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 SMIM13P0DJ93 91 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 ST20Q9HBF5 79 aa-1.18□□□□□ -2.6
GCFC2-209ENST00000486016 HMGA1P17096 107 aaKnown RBP-1.19□□□□□ -2.6
GCFC2-209ENST00000486016 ADIRFQ15847 76 aa-1.19□□□□□ -2.6
GCFC2-209ENST00000486016 THOC2Q8NI27 1593 aaKnown RBP-1.2□□□□□ -2.6
GCFC2-209ENST00000486016 MRPL33O75394 65 aaKnown RBP-1.2□□□□□ -2.6
GCFC2-209ENST00000486016 MT1HP80294 61 aa-1.2□□□□□ -2.6
GCFC2-209ENST00000486016 ZC3H13Q5T200 1668 aaKnown RBP-1.21□□□□□ -2.6
GCFC2-209ENST00000486016 KDM5DQ9BY66 1539 aa-1.21□□□□□ -2.6
GCFC2-209ENST00000486016 ANKRD36CQ5JPF3 1778 aa-1.21□□□□□ -2.6
GCFC2-209ENST00000486016 A0A0C4DFX4 3053 aa-1.22□□□□□ -2.6
GCFC2-209ENST00000486016 TJP1Q07157 1748 aa-1.22□□□□□ -2.6
GCFC2-209ENST00000486016 H3BUT2 72 aa-1.22□□□□□ -2.6
GCFC2-209ENST00000486016 KRTAP19-5Q3LI72 72 aa-1.22□□□□□ -2.6
GCFC2-209ENST00000486016 KCNQ1DNQ9H478 68 aa-1.22□□□□□ -2.6
GCFC2-209ENST00000486016 HFM1A2PYH4 1435 aa-1.23□□□□□ -2.61
GCFC2-209ENST00000486016 ARHGAP35Q9NRY4 1499 aa-1.23□□□□□ -2.61
GCFC2-209ENST00000486016 KIAA0586Q9BVV6 1533 aa-1.23□□□□□ -2.61
GCFC2-209ENST00000486016 GNG2P59768 71 aa-1.23□□□□□ -2.61
GCFC2-209ENST00000486016 S100A13Q99584 98 aa-1.23□□□□□ -2.61
GCFC2-209ENST00000486016 DOPEY1Q5JWR5 2465 aa-1.24□□□□□ -2.61
GCFC2-209ENST00000486016 RANBP2P49792 3224 aaKnown RBP-1.24□□□□□ -2.61
GCFC2-209ENST00000486016 DNAH1Q9P2D7 4330 aa-1.24□□□□□ -2.61
GCFC2-209ENST00000486016 DNAH2Q9P225 4427 aa-1.24□□□□□ -2.61
GCFC2-209ENST00000486016 RNF17Q9BXT8 1623 aaKnown RBP-1.24□□□□□ -2.61
GCFC2-209ENST00000486016 CRIP1P50238 77 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms