RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 UBE2BP63146 152 aa6.99□□□□□ -1.29
SND1-212ENST00000485871 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
SND1-212ENST00000485871 REG3GQ6UW15 175 aa6.99□□□□□ -1.29
SND1-212ENST00000485871 Q6ZRX8 168 aa6.99□□□□□ -1.29
SND1-212ENST00000485871 Q6JHZ5 121 aa6.98□□□□□ -1.29
SND1-212ENST00000485871 Q6ZQT0 140 aa6.98□□□□□ -1.29
SND1-212ENST00000485871 B5MCH6 92 aa6.97□□□□□ -1.29
SND1-212ENST00000485871 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
SND1-212ENST00000485871 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
SND1-212ENST00000485871 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
SND1-212ENST00000485871 SMCR5Q8TEV8 140 aa6.96□□□□□ -1.3
SND1-212ENST00000485871 UBL5Q9BZL1 73 aa6.96□□□□□ -1.3
SND1-212ENST00000485871 TRBV7-4A0A0J9YYF1 115 aa6.95□□□□□ -1.3
SND1-212ENST00000485871 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
SND1-212ENST00000485871 A0A1B0GW54 56 aa6.94□□□□□ -1.3
SND1-212ENST00000485871 BCE1O60756 84 aa6.94□□□□□ -1.3
SND1-212ENST00000485871 Q9BRP9 147 aa6.94□□□□□ -1.3
SND1-212ENST00000485871 H0Y9J4 135 aa6.93□□□□□ -1.3
SND1-212ENST00000485871 PRLHP81277 87 aa6.93□□□□□ -1.3
SND1-212ENST00000485871 FAM19A1Q7Z5A9 133 aa6.93□□□□□ -1.3
SND1-212ENST00000485871 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
SND1-212ENST00000485871 IGLV5-48A0A075B6I7 105 aa6.92□□□□□ -1.3
SND1-212ENST00000485871 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
SND1-212ENST00000485871 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
SND1-212ENST00000485871 ERC2-IT1O76042 136 aa6.9□□□□□ -1.3
SND1-212ENST00000485871 IGLV7-43P04211 117 aa6.9□□□□□ -1.3
SND1-212ENST00000485871 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
SND1-212ENST00000485871 Q8N377 158 aa6.89□□□□□ -1.31
SND1-212ENST00000485871 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
SND1-212ENST00000485871 UBE2AP49459 152 aa6.88□□□□□ -1.31
SND1-212ENST00000485871 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
SND1-212ENST00000485871 ZNF861PO60384 105 aa6.87□□□□□ -1.31
SND1-212ENST00000485871 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 F8WEM9 126 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 J3QL48 77 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
SND1-212ENST00000485871 CXCL6P80162 114 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 HIGD2AQ9BW72 106 aa6.86□□□□□ -1.31
SND1-212ENST00000485871 ATOX1O00244 68 aa6.85□□□□□ -1.31
SND1-212ENST00000485871 DEFB105AQ8NG35 78 aa6.85□□□□□ -1.31
SND1-212ENST00000485871 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
SND1-212ENST00000485871 FAT1Q14517 4588 aa6.84□□□□□ -1.31
SND1-212ENST00000485871 SRRM2Q9UQ35 2752 aaKnown RBP6.84□□□□□ -1.31
SND1-212ENST00000485871 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
SND1-212ENST00000485871 HIST1H4AP62805 103 aaKnown RBP6.84□□□□□ -1.31
SND1-212ENST00000485871 Q5VSD8 79 aa6.84□□□□□ -1.31
SND1-212ENST00000485871 Q6ZVQ6 151 aa6.84□□□□□ -1.31
SND1-212ENST00000485871 ST20-AS1Q8NBB2 130 aa6.84□□□□□ -1.31
SND1-212ENST00000485871 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
SND1-212ENST00000485871 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
SND1-212ENST00000485871 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
SND1-212ENST00000485871 SPRR1BP22528 89 aa6.81□□□□□ -1.32
SND1-212ENST00000485871 MYCBP2O75592 4640 aa6.8□□□□□ -1.32
SND1-212ENST00000485871 Q8NBF4 154 aa6.8□□□□□ -1.32
SND1-212ENST00000485871 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
SND1-212ENST00000485871 NREPQ16612 68 aa6.79□□□□□ -1.32
SND1-212ENST00000485871 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
SND1-212ENST00000485871 SPINK6Q6UWN8 80 aa6.78□□□□□ -1.32
SND1-212ENST00000485871 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
SND1-212ENST00000485871 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
SND1-212ENST00000485871 PLA2G1BP04054 148 aaKnown RBP6.77□□□□□ -1.33
SND1-212ENST00000485871 SMIM20Q8N5G0 67 aa6.77□□□□□ -1.33
SND1-212ENST00000485871 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
SND1-212ENST00000485871 UQCRQO14949 82 aa6.76□□□□□ -1.33
SND1-212ENST00000485871 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
SND1-212ENST00000485871 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
SND1-212ENST00000485871 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
SND1-212ENST00000485871 CRYGAP11844 174 aa6.75□□□□□ -1.33
SND1-212ENST00000485871 BPY2O14599 106 aa6.74□□□□□ -1.33
SND1-212ENST00000485871 COX7CP15954 63 aa6.74□□□□□ -1.33
SND1-212ENST00000485871 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
SND1-212ENST00000485871 A0A087WVE0 104 aa6.73□□□□□ -1.33
SND1-212ENST00000485871 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
SND1-212ENST00000485871 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
SND1-212ENST00000485871 IGFL1Q6UW32 110 aa6.71□□□□□ -1.34
SND1-212ENST00000485871 A0A087X002 238 aa6.7□□□□□ -1.34
SND1-212ENST00000485871 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
SND1-212ENST00000485871 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
SND1-212ENST00000485871 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
SND1-212ENST00000485871 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
SND1-212ENST00000485871 TRAV7A0A075B6U4 112 aa6.67□□□□□ -1.34
SND1-212ENST00000485871 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
SND1-212ENST00000485871 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
SND1-212ENST00000485871 IGLV9-49A0A0B4J1Y8 123 aa6.65□□□□□ -1.34
SND1-212ENST00000485871 A0A0G2JQZ4 141 aa6.64□□□□□ -1.35
SND1-212ENST00000485871 MOBPQ13875 183 aa6.64□□□□□ -1.35
SND1-212ENST00000485871 PRR26Q8N8Z3 221 aa6.63□□□□□ -1.35
SND1-212ENST00000485871 A0A087WSZ3 146 aa6.62□□□□□ -1.35
SND1-212ENST00000485871 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
SND1-212ENST00000485871 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
SND1-212ENST00000485871 J3KT08 172 aa6.61□□□□□ -1.35
SND1-212ENST00000485871 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
SND1-212ENST00000485871 DSCR10P59022 87 aa6.59□□□□□ -1.35
SND1-212ENST00000485871 KRTAP10-8P60410 259 aa6.59□□□□□ -1.35
SND1-212ENST00000485871 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
SND1-212ENST00000485871 TMEM258P61165 79 aa6.57□□□□□ -1.36
SND1-212ENST00000485871 Q8N9L7 120 aa6.57□□□□□ -1.36
SND1-212ENST00000485871 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
SND1-212ENST00000485871 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms