RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 PKD1P98161 4303 aa5.9□□□□□ -1.47
CTSA-208ENST00000485627 A0A1B0GV72 72 aa5.89□□□□□ -1.47
CTSA-208ENST00000485627 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
CTSA-208ENST00000485627 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
CTSA-208ENST00000485627 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
CTSA-208ENST00000485627 ST20-AS1Q8NBB2 130 aa5.88□□□□□ -1.47
CTSA-208ENST00000485627 IGLV5-48A0A075B6I7 105 aa5.87□□□□□ -1.47
CTSA-208ENST00000485627 Q8N377 158 aa5.87□□□□□ -1.47
CTSA-208ENST00000485627 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
CTSA-208ENST00000485627 DSCR8Q96T75 97 aa5.87□□□□□ -1.47
CTSA-208ENST00000485627 C14orf132Q9NPU4 83 aa5.87□□□□□ -1.47
CTSA-208ENST00000485627 F8WEM9 126 aa5.86□□□□□ -1.47
CTSA-208ENST00000485627 ZNF861PO60384 105 aa5.86□□□□□ -1.47
CTSA-208ENST00000485627 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
CTSA-208ENST00000485627 HAMPP81172 84 aa5.86□□□□□ -1.47
CTSA-208ENST00000485627 KRTAP13-1Q8IUC0 172 aa5.86□□□□□ -1.47
CTSA-208ENST00000485627 ZNF706Q9Y5V0 76 aaPredicted RBP5.86□□□□□ -1.47
CTSA-208ENST00000485627 PDE6GP18545 87 aa5.85□□□□□ -1.47
CTSA-208ENST00000485627 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
CTSA-208ENST00000485627 IGLV7-43P04211 117 aa5.84□□□□□ -1.47
CTSA-208ENST00000485627 VPS25Q9BRG1 176 aa5.84□□□□□ -1.47
CTSA-208ENST00000485627 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.48
CTSA-208ENST00000485627 CCKP06307 115 aa5.83□□□□□ -1.48
CTSA-208ENST00000485627 ACYP1P07311 99 aa5.83□□□□□ -1.48
CTSA-208ENST00000485627 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
CTSA-208ENST00000485627 FAM240AA0A1B0GVK7 77 aa5.82□□□□□ -1.48
CTSA-208ENST00000485627 C3orf22Q8N5N4 141 aa5.82□□□□□ -1.48
CTSA-208ENST00000485627 SPRR1BP22528 89 aa5.81□□□□□ -1.48
CTSA-208ENST00000485627 Q6ZQT0 140 aa5.81□□□□□ -1.48
CTSA-208ENST00000485627 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
CTSA-208ENST00000485627 LRP1BQ9NZR2 4599 aa5.81□□□□□ -1.48
CTSA-208ENST00000485627 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
CTSA-208ENST00000485627 Q8N1X5 172 aa5.8□□□□□ -1.48
CTSA-208ENST00000485627 RPL37AP61513 92 aaKnown RBP5.79□□□□□ -1.48
CTSA-208ENST00000485627 SMIM29Q86T20 159 aa5.79□□□□□ -1.48
CTSA-208ENST00000485627 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
CTSA-208ENST00000485627 CDK2AP2O75956 126 aa5.78□□□□□ -1.48
CTSA-208ENST00000485627 XGP55808 180 aa5.78□□□□□ -1.48
CTSA-208ENST00000485627 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
CTSA-208ENST00000485627 Q6JHZ5 121 aa5.77□□□□□ -1.49
CTSA-208ENST00000485627 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
CTSA-208ENST00000485627 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
CTSA-208ENST00000485627 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
CTSA-208ENST00000485627 C9orf153Q5TBE3 101 aa5.76□□□□□ -1.49
CTSA-208ENST00000485627 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
CTSA-208ENST00000485627 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
CTSA-208ENST00000485627 FLG2Q5D862 2391 aaPredicted RBP5.74□□□□□ -1.49
CTSA-208ENST00000485627 A0A1B0GW54 56 aa5.74□□□□□ -1.49
CTSA-208ENST00000485627 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
CTSA-208ENST00000485627 LINC00846Q9NV44 126 aa5.74□□□□□ -1.49
CTSA-208ENST00000485627 Q8NBF4 154 aa5.73□□□□□ -1.49
CTSA-208ENST00000485627 SIGMAR1Q99720 223 aa5.73□□□□□ -1.49
CTSA-208ENST00000485627 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
CTSA-208ENST00000485627 SPINK6Q6UWN8 80 aa5.72□□□□□ -1.49
CTSA-208ENST00000485627 LINC00643Q86TS7 51 aa5.72□□□□□ -1.49
CTSA-208ENST00000485627 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
CTSA-208ENST00000485627 MOBPQ13875 183 aa5.71□□□□□ -1.5
CTSA-208ENST00000485627 SRRM2Q9UQ35 2752 aaKnown RBP5.71□□□□□ -1.5
CTSA-208ENST00000485627 NREPQ16612 68 aa5.7□□□□□ -1.5
CTSA-208ENST00000485627 A0A0G2JQZ4 141 aa5.69□□□□□ -1.5
CTSA-208ENST00000485627 CRYGAP11844 174 aa5.69□□□□□ -1.5
CTSA-208ENST00000485627 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
CTSA-208ENST00000485627 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
CTSA-208ENST00000485627 MT-ATP8P03928 68 aa5.68□□□□□ -1.5
CTSA-208ENST00000485627 ATP5EP2Q5VTU8 51 aa5.68□□□□□ -1.5
CTSA-208ENST00000485627 Q6ZVQ6 151 aa5.68□□□□□ -1.5
CTSA-208ENST00000485627 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
CTSA-208ENST00000485627 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
CTSA-208ENST00000485627 Q6Q795 121 aa5.67□□□□□ -1.5
CTSA-208ENST00000485627 A0A087WSZ3 146 aa5.66□□□□□ -1.5
CTSA-208ENST00000485627 IGKV3D-7A0A0C4DH55 119 aa5.66□□□□□ -1.5
CTSA-208ENST00000485627 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
CTSA-208ENST00000485627 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.5
CTSA-208ENST00000485627 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
CTSA-208ENST00000485627 Q5VSD8 79 aa5.64□□□□□ -1.51
CTSA-208ENST00000485627 SS18L2Q9UHA2 77 aa5.64□□□□□ -1.51
CTSA-208ENST00000485627 A0A087X002 238 aa5.63□□□□□ -1.51
CTSA-208ENST00000485627 BPY2O14599 106 aa5.63□□□□□ -1.51
CTSA-208ENST00000485627 CXCL6P80162 114 aa5.63□□□□□ -1.51
CTSA-208ENST00000485627 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
CTSA-208ENST00000485627 IMUPQ9GZP8 106 aa5.63□□□□□ -1.51
CTSA-208ENST00000485627 KRTAP10-4P60372 401 aaPredicted RBP5.62□□□□□ -1.51
CTSA-208ENST00000485627 CD164Q04900 197 aa5.62□□□□□ -1.51
CTSA-208ENST00000485627 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
CTSA-208ENST00000485627 FAT1Q14517 4588 aa5.62□□□□□ -1.51
CTSA-208ENST00000485627 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
CTSA-208ENST00000485627 PRR26Q8N8Z3 221 aa5.59□□□□□ -1.51
CTSA-208ENST00000485627 SCGB1A1P11684 91 aa5.58□□□□□ -1.52
CTSA-208ENST00000485627 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CTSA-208ENST00000485627 J3KT08 172 aa5.57□□□□□ -1.52
CTSA-208ENST00000485627 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
CTSA-208ENST00000485627 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
CTSA-208ENST00000485627 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
CTSA-208ENST00000485627 PCP4P48539 62 aa5.55□□□□□ -1.52
CTSA-208ENST00000485627 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
CTSA-208ENST00000485627 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
CTSA-208ENST00000485627 A0A087WVE0 104 aa5.54□□□□□ -1.52
CTSA-208ENST00000485627 FAM236AA0A1B0GUQ0 79 aa5.54□□□□□ -1.52
CTSA-208ENST00000485627 FAM236BA0A1B0GV22 79 aa5.54□□□□□ -1.52
CTSA-208ENST00000485627 NDUFB1O75438 58 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms