RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
HDAC6-227ENST00000485102 A0A1B0GX51 115 aa7.29□□□□□ -1.24
HDAC6-227ENST00000485102 H3BQ85 93 aa7.28□□□□□ -1.24
HDAC6-227ENST00000485102 LYRM7Q5U5X0 104 aa7.28□□□□□ -1.24
HDAC6-227ENST00000485102 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
HDAC6-227ENST00000485102 PSMB2P49721 201 aa7.27□□□□□ -1.25
HDAC6-227ENST00000485102 OCIAD2Q56VL3 154 aa7.27□□□□□ -1.25
HDAC6-227ENST00000485102 SSBP3-AS1Q7Z2R9 100 aa7.27□□□□□ -1.25
HDAC6-227ENST00000485102 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
HDAC6-227ENST00000485102 H7C2G1 150 aa7.26□□□□□ -1.25
HDAC6-227ENST00000485102 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
HDAC6-227ENST00000485102 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
HDAC6-227ENST00000485102 XP32Q5T750 250 aa7.25□□□□□ -1.25
HDAC6-227ENST00000485102 Q8N377 158 aa7.25□□□□□ -1.25
HDAC6-227ENST00000485102 PPDPFLQ8WWR9 84 aa7.25□□□□□ -1.25
HDAC6-227ENST00000485102 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
HDAC6-227ENST00000485102 Q9BRP9 147 aa7.24□□□□□ -1.25
HDAC6-227ENST00000485102 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
HDAC6-227ENST00000485102 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-227ENST00000485102 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
HDAC6-227ENST00000485102 DNAL4O96015 105 aa7.22□□□□□ -1.25
HDAC6-227ENST00000485102 SCGB1C2P0DMR2 95 aa7.22□□□□□ -1.25
HDAC6-227ENST00000485102 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
HDAC6-227ENST00000485102 SPRR1BP22528 89 aa7.2□□□□□ -1.26
HDAC6-227ENST00000485102 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
HDAC6-227ENST00000485102 K7ERJ3 54 aa7.19□□□□□ -1.26
HDAC6-227ENST00000485102 TRIAP1O43715 76 aa7.19□□□□□ -1.26
HDAC6-227ENST00000485102 MOBPQ13875 183 aa7.19□□□□□ -1.26
HDAC6-227ENST00000485102 BATFQ16520 125 aa7.19□□□□□ -1.26
HDAC6-227ENST00000485102 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
HDAC6-227ENST00000485102 IGLV5-48A0A075B6I7 105 aa7.18□□□□□ -1.26
HDAC6-227ENST00000485102 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
HDAC6-227ENST00000485102 TRBV20-1A0A075B6N2 111 aa7.17□□□□□ -1.26
HDAC6-227ENST00000485102 IGLV9-49A0A0B4J1Y8 123 aa7.17□□□□□ -1.26
HDAC6-227ENST00000485102 F8WEM9 126 aa7.17□□□□□ -1.26
HDAC6-227ENST00000485102 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
HDAC6-227ENST00000485102 Q6ZQY7 126 aa7.16□□□□□ -1.26
HDAC6-227ENST00000485102 TRACP01848 142 aa7.15□□□□□ -1.26
HDAC6-227ENST00000485102 ATXN8Q156A1 80 aa7.15□□□□□ -1.26
HDAC6-227ENST00000485102 TMEM256-PLSCR3K7ERE1 68 aa7.14□□□□□ -1.27
HDAC6-227ENST00000485102 MT1HP80294 61 aa7.14□□□□□ -1.27
HDAC6-227ENST00000485102 DEFB105AQ8NG35 78 aa7.14□□□□□ -1.27
HDAC6-227ENST00000485102 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
HDAC6-227ENST00000485102 ORMDL1Q9P0S3 153 aa7.14□□□□□ -1.27
HDAC6-227ENST00000485102 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
HDAC6-227ENST00000485102 LST1O00453 97 aa7.12□□□□□ -1.27
HDAC6-227ENST00000485102 FABP2P12104 132 aa7.12□□□□□ -1.27
HDAC6-227ENST00000485102 C9orf153Q5TBE3 101 aa7.12□□□□□ -1.27
HDAC6-227ENST00000485102 ST20-AS1Q8NBB2 130 aa7.12□□□□□ -1.27
HDAC6-227ENST00000485102 Q6JHZ5 121 aa7.11□□□□□ -1.27
HDAC6-227ENST00000485102 PCP4L1A6NKN8 68 aa7.1□□□□□ -1.27
HDAC6-227ENST00000485102 H3BUT2 72 aa7.09□□□□□ -1.27
HDAC6-227ENST00000485102 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
HDAC6-227ENST00000485102 CLEC2BQ92478 149 aa7.09□□□□□ -1.27
HDAC6-227ENST00000485102 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-227ENST00000485102 UBE2V1Q13404 147 aa7.08□□□□□ -1.28
HDAC6-227ENST00000485102 FAM218AQ96MZ4 157 aa7.08□□□□□ -1.28
HDAC6-227ENST00000485102 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
HDAC6-227ENST00000485102 TAX1BP3O14907 124 aa7.07□□□□□ -1.28
HDAC6-227ENST00000485102 CD164Q04900 197 aa7.07□□□□□ -1.28
HDAC6-227ENST00000485102 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
HDAC6-227ENST00000485102 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
HDAC6-227ENST00000485102 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
HDAC6-227ENST00000485102 NDUFV3P56181 108 aaKnown RBP7.05□□□□□ -1.28
HDAC6-227ENST00000485102 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
HDAC6-227ENST00000485102 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-227ENST00000485102 TCL1BO95988 128 aa7.03□□□□□ -1.28
HDAC6-227ENST00000485102 JMJD7-PLA2G4BH0Y9G9 81 aa7.02□□□□□ -1.29
HDAC6-227ENST00000485102 H3BMG7 143 aa7.02□□□□□ -1.29
HDAC6-227ENST00000485102 BAALC-AS2P0C853 105 aa7.02□□□□□ -1.29
HDAC6-227ENST00000485102 GTF2H5Q6ZYL4 71 aa7.02□□□□□ -1.29
HDAC6-227ENST00000485102 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
HDAC6-227ENST00000485102 H3BT86 120 aa7□□□□□ -1.29
HDAC6-227ENST00000485102 PDE6GP18545 87 aa7□□□□□ -1.29
HDAC6-227ENST00000485102 Q5XG85 94 aa7□□□□□ -1.29
HDAC6-227ENST00000485102 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
HDAC6-227ENST00000485102 NAA38Q9BRA0 125 aaKnown RBP7□□□□□ -1.29
HDAC6-227ENST00000485102 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
HDAC6-227ENST00000485102 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
HDAC6-227ENST00000485102 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
HDAC6-227ENST00000485102 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-227ENST00000485102 Q6Q795 121 aa6.98□□□□□ -1.29
HDAC6-227ENST00000485102 A0A1B0GW54 56 aa6.97□□□□□ -1.29
HDAC6-227ENST00000485102 C9JAW5 83 aa6.97□□□□□ -1.29
HDAC6-227ENST00000485102 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
HDAC6-227ENST00000485102 SS18L2Q9UHA2 77 aa6.97□□□□□ -1.29
HDAC6-227ENST00000485102 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.3
HDAC6-227ENST00000485102 K7EP34 96 aa6.95□□□□□ -1.3
HDAC6-227ENST00000485102 IGFL1Q6UW32 110 aa6.95□□□□□ -1.3
HDAC6-227ENST00000485102 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
HDAC6-227ENST00000485102 M0R2T5 61 aa6.93□□□□□ -1.3
HDAC6-227ENST00000485102 RPL37P61927 97 aaKnown RBP6.93□□□□□ -1.3
HDAC6-227ENST00000485102 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
HDAC6-227ENST00000485102 TRBV7-7A0A0K0K1E9 115 aa6.92□□□□□ -1.3
HDAC6-227ENST00000485102 F8W1H4 67 aa6.91□□□□□ -1.3
HDAC6-227ENST00000485102 LOC110117498A0A087WWA1 95 aa6.89□□□□□ -1.31
HDAC6-227ENST00000485102 CCKP06307 115 aa6.89□□□□□ -1.31
HDAC6-227ENST00000485102 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
HDAC6-227ENST00000485102 OBSCN-AS1Q96MR7 158 aa6.87□□□□□ -1.31
HDAC6-227ENST00000485102 A0A087WSZ3 146 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms